RNA–Protein interactions for RNA: ENST00000466923.5

KPNA1-204, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 3,316 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-204ENST00000466923 PCDH11YQ9BZA8 1340 aa6.48□□□□□ -1.37
KPNA1-204ENST00000466923 GLI3P10071 1580 aa6.48□□□□□ -1.37
KPNA1-204ENST00000466923 RGS12O14924 1447 aa6.48□□□□□ -1.37
KPNA1-204ENST00000466923 TCERG1O14776 1098 aaKnown RBP6.48□□□□□ -1.37
KPNA1-204ENST00000466923 AKAP4Q5JQC9 854 aa6.48□□□□□ -1.37
KPNA1-204ENST00000466923 SMIM5Q71RC9 77 aa6.48□□□□□ -1.37
KPNA1-204ENST00000466923 PIGBQ92521 554 aa6.48□□□□□ -1.37
KPNA1-204ENST00000466923 RBM42Q9BTD8 480 aaKnown RBP6.48□□□□□ -1.37
KPNA1-204ENST00000466923 CDCA7Q9BWT1 371 aaPredicted RBP6.48□□□□□ -1.37
KPNA1-204ENST00000466923 RNMTO43148 476 aaKnown RBP6.47□□□□□ -1.37
KPNA1-204ENST00000466923 APBA3O96018 575 aa6.47□□□□□ -1.37
KPNA1-204ENST00000466923 WWC1Q8IX03 1113 aa6.47□□□□□ -1.37
KPNA1-204ENST00000466923 PIP4K2AP48426 406 aaPredicted RBP6.47□□□□□ -1.37
KPNA1-204ENST00000466923 TMOD3Q9NYL9 352 aa6.47□□□□□ -1.37
KPNA1-204ENST00000466923 BTBD11A6QL63 1104 aa6.47□□□□□ -1.37
KPNA1-204ENST00000466923 EN1Q05925 392 aaPredicted RBP6.47□□□□□ -1.37
KPNA1-204ENST00000466923 FAM196AQ6ZSG2 479 aa6.47□□□□□ -1.37
KPNA1-204ENST00000466923 DCAF5Q96JK2 942 aa6.47□□□□□ -1.37
KPNA1-204ENST00000466923 FBXO3Q9UK99 471 aa6.47□□□□□ -1.37
KPNA1-204ENST00000466923 OVOS2A0A0G2JMS6 1433 aa6.46□□□□□ -1.37
KPNA1-204ENST00000466923 PRAMEF22A3QJZ6 481 aa6.46□□□□□ -1.38
KPNA1-204ENST00000466923 ZNF330Q9Y3S2 320 aaPredicted RBP6.46□□□□□ -1.38
KPNA1-204ENST00000466923 ZNF428Q96B54 188 aa6.46□□□□□ -1.38
KPNA1-204ENST00000466923 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.46□□□□□ -1.382e-6■■■□□ 18.7
KPNA1-204ENST00000466923 TSPYL4Q9UJ04 414 aa6.45□□□□□ -1.38
KPNA1-204ENST00000466923 DISP2A7MBM2 1401 aa6.45□□□□□ -1.38
KPNA1-204ENST00000466923 MAP3K5Q99683 1374 aa6.45□□□□□ -1.38
KPNA1-204ENST00000466923 EIF2S2P20042 333 aaKnown RBP6.45□□□□□ -1.38
KPNA1-204ENST00000466923 NGEFQ8N5V2 710 aa6.45□□□□□ -1.38
KPNA1-204ENST00000466923 SLC52A2Q9HAB3 445 aa6.45□□□□□ -1.38
KPNA1-204ENST00000466923 NRAPQ86VF7 1730 aa6.45□□□□□ -1.38
KPNA1-204ENST00000466923 NWD2Q9ULI1 1742 aa6.45□□□□□ -1.38
KPNA1-204ENST00000466923 SF3B2Q13435 895 aaKnown RBP6.44□□□□□ -1.38
KPNA1-204ENST00000466923 TAF7Q15545 349 aaPredicted RBP6.44□□□□□ -1.38
KPNA1-204ENST00000466923 HSP90AB1P08238 724 aaKnown RBP6.44□□□□□ -1.38
KPNA1-204ENST00000466923 EZH2Q15910 746 aaKnown RBP6.44□□□□□ -1.38
KPNA1-204ENST00000466923 TTC5Q8N0Z6 440 aa6.44□□□□□ -1.38
KPNA1-204ENST00000466923 ZNF496Q96IT1 587 aaPredicted RBP6.44□□□□□ -1.38
KPNA1-204ENST00000466923 ATG3Q9NT62 314 aa6.44□□□□□ -1.38
KPNA1-204ENST00000466923 KDM6AO15550 1401 aaPredicted RBP6.44□□□□□ -1.38
KPNA1-204ENST00000466923 ANXA1P04083 346 aa6.43□□□□□ -1.38
KPNA1-204ENST00000466923 MBIPQ9NS73 344 aa6.43□□□□□ -1.38
KPNA1-204ENST00000466923 ATP6V1AP38606 617 aa6.43□□□□□ -1.38
KPNA1-204ENST00000466923 NKX1-1Q15270 411 aaPredicted RBP6.43□□□□□ -1.38
KPNA1-204ENST00000466923 ZNF790Q6PG37 636 aa6.43□□□□□ -1.38
KPNA1-204ENST00000466923 TSPYL6Q8N831 410 aa6.43□□□□□ -1.38
KPNA1-204ENST00000466923 BCL2L13Q9BXK5 485 aa6.43□□□□□ -1.38
KPNA1-204ENST00000466923 FAM208AQ9UK61 1670 aaKnown RBP6.43□□□□□ -1.38
KPNA1-204ENST00000466923 TNS2Q63HR2 1409 aa6.43□□□□□ -1.38
KPNA1-204ENST00000466923 ERVV-2B6SEH9 535 aa6.43□□□□□ -1.38
KPNA1-204ENST00000466923 GOLGA2Q08379 1002 aa6.43□□□□□ -1.38
KPNA1-204ENST00000466923 PROM2Q8N271 834 aa6.43□□□□□ -1.38
KPNA1-204ENST00000466923 BCL11BQ9C0K0 894 aaPredicted RBP6.43□□□□□ -1.38
KPNA1-204ENST00000466923 USP16Q9Y5T5 823 aa6.43□□□□□ -1.38
KPNA1-204ENST00000466923 C8orf58Q8NAV2 365 aa6.42□□□□□ -1.38
KPNA1-204ENST00000466923 UPF1Q92900 1129 aaKnown RBP eCLIP6.42□□□□□ -1.38
KPNA1-204ENST00000466923 SLC4A9Q96Q91 983 aa6.42□□□□□ -1.38
KPNA1-204ENST00000466923 LRRC4BQ9NT99 713 aa6.42□□□□□ -1.38
KPNA1-204ENST00000466923 EXOSC9Q06265 439 aaKnown RBP6.42□□□□□ -1.38
KPNA1-204ENST00000466923 LMOD3Q0VAK6 560 aa6.42□□□□□ -1.38
KPNA1-204ENST00000466923 RGPD1P0DJD0 1748 aa6.42□□□□□ -1.38
KPNA1-204ENST00000466923 BRWD3Q6RI45 1802 aa6.42□□□□□ -1.38
KPNA1-204ENST00000466923 NCAPD2Q15021 1401 aa6.42□□□□□ -1.38
KPNA1-204ENST00000466923 LOC102724428A0A0B4J2F2 783 aa6.42□□□□□ -1.38
KPNA1-204ENST00000466923 SIK1P57059 783 aa6.42□□□□□ -1.38
KPNA1-204ENST00000466923 DNAJC10Q8IXB1 793 aa6.42□□□□□ -1.38
KPNA1-204ENST00000466923 CCNL1Q9UK58 526 aaPredicted RBP6.42□□□□□ -1.38
KPNA1-204ENST00000466923 MSH5O43196 834 aa6.41□□□□□ -1.38
KPNA1-204ENST00000466923 PHF14O94880 888 aa6.41□□□□□ -1.38
KPNA1-204ENST00000466923 A1BGP04217 495 aa6.41□□□□□ -1.38
KPNA1-204ENST00000466923 MYL6BP14649 208 aa6.41□□□□□ -1.38
KPNA1-204ENST00000466923 CANXP27824 592 aaKnown RBP6.41□□□□□ -1.38
KPNA1-204ENST00000466923 CHL1O00533 1208 aa6.41□□□□□ -1.38
KPNA1-204ENST00000466923 TXNRD1Q16881 649 aa6.41□□□□□ -1.38
KPNA1-204ENST00000466923 ITPK1Q13572 414 aa6.4□□□□□ -1.38
KPNA1-204ENST00000466923 PDGFDQ9GZP0 370 aaPredicted RBP6.4□□□□□ -1.38
KPNA1-204ENST00000466923 PALLDQ8WX93 1383 aa6.4□□□□□ -1.38
KPNA1-204ENST00000466923 HTATSF1O43719 755 aaKnown RBP6.4□□□□□ -1.38
KPNA1-204ENST00000466923 GNAI1P63096 354 aa6.4□□□□□ -1.38
KPNA1-204ENST00000466923 AIMP1Q12904 312 aaKnown RBP6.4□□□□□ -1.38
KPNA1-204ENST00000466923 FANCIQ9NVI1 1328 aa6.4□□□□□ -1.39
KPNA1-204ENST00000466923 CEMIPQ8WUJ3 1361 aa6.4□□□□□ -1.39
KPNA1-204ENST00000466923 PSDA5PKW4 1024 aaPredicted RBP6.4□□□□□ -1.39
KPNA1-204ENST00000466923 BAG6P46379 1132 aa6.4□□□□□ -1.39
KPNA1-204ENST00000466923 EIF4A1P60842 406 aaKnown RBP6.4□□□□□ -1.39
KPNA1-204ENST00000466923 DUSP27Q5VZP5 1158 aa6.4□□□□□ -1.39
KPNA1-204ENST00000466923 BCL9O00512 1426 aa6.4□□□□□ -1.39
KPNA1-204ENST00000466923 LRRC37A3O60309 1634 aa6.39□□□□□ -1.39
KPNA1-204ENST00000466923 SLFN5Q08AF3 891 aa6.39□□□□□ -1.39
KPNA1-204ENST00000466923 AMIGO3Q86WK7 504 aa6.39□□□□□ -1.39
KPNA1-204ENST00000466923 CNKSR2Q8WXI2 1034 aa6.39□□□□□ -1.39
KPNA1-204ENST00000466923 FMNL2Q96PY5 1086 aa6.39□□□□□ -1.39
KPNA1-204ENST00000466923 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.39□□□□□ -1.39
KPNA1-204ENST00000466923 WDR63Q8IWG1 891 aa6.39□□□□□ -1.39
KPNA1-204ENST00000466923 SPRYD3Q8NCJ5 442 aa6.39□□□□□ -1.39
KPNA1-204ENST00000466923 IFT57Q9NWB7 429 aa6.39□□□□□ -1.39
KPNA1-204ENST00000466923 GIGYF1O75420 1035 aaPredicted RBP6.38□□□□□ -1.39
KPNA1-204ENST00000466923 CCDC27Q2M243 656 aa6.38□□□□□ -1.39
KPNA1-204ENST00000466923 PROSER3Q2NL68 480 aa6.38□□□□□ -1.39
KPNA1-204ENST00000466923 TWISTNBQ3B726 338 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms