RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 SF3B2Q13435 895 aaKnown RBP21.34■■□□□ 1.01
HLA-C-205ENST00000466892 CFAP44Q96MT7 982 aa21.33■■□□□ 1.01
HLA-C-205ENST00000466892 IFT57Q9NWB7 429 aa21.33■■□□□ 1.01
HLA-C-205ENST00000466892 DLG5Q8TDM6 1919 aa21.32■■□□□ 1
HLA-C-205ENST00000466892 PLSCR1O15162 318 aa21.32■■□□□ 1
HLA-C-205ENST00000466892 GNAI1P63096 354 aa21.32■■□□□ 1
HLA-C-205ENST00000466892 THUMPD2Q9BTF0 503 aaKnown RBP21.32■■□□□ 1
HLA-C-205ENST00000466892 EP400Q96L91 3159 aa21.32■■□□□ 1
HLA-C-205ENST00000466892 BTBD11A6QL63 1104 aa21.31■■□□□ 1
HLA-C-205ENST00000466892 HNRNPUQ00839 825 aaKnown RBP eCLIP21.31■■□□□ 1
HLA-C-205ENST00000466892 SBF2Q86WG5 1849 aa21.31■■□□□ 1
HLA-C-205ENST00000466892 CHL1O00533 1208 aa21.3■■□□□ 1
HLA-C-205ENST00000466892 ZNF790Q6PG37 636 aa21.3■■□□□ 1
HLA-C-205ENST00000466892 TTC5Q8N0Z6 440 aa21.3■■□□□ 1
HLA-C-205ENST00000466892 PALLDQ8WX93 1383 aa21.29■■□□□ 1
HLA-C-205ENST00000466892 APBA3O96018 575 aa21.29■■□□□ 1
HLA-C-205ENST00000466892 ZNF853P0CG23 659 aa21.29■■□□□ 1
HLA-C-205ENST00000466892 BAG6P46379 1132 aa21.29■■□□□ 1
HLA-C-205ENST00000466892 ATG3Q9NT62 314 aa21.29■■□□□ 1
HLA-C-205ENST00000466892 ZBED9Q6R2W3 1325 aa21.29■■□□□ 1
HLA-C-205ENST00000466892 PTF1AQ7RTS3 328 aa21.28■■□□□ 1
HLA-C-205ENST00000466892 UPF1Q92900 1129 aaKnown RBP eCLIP21.28■■□□□ 1
HLA-C-205ENST00000466892 SIPA1L3O60292 1781 aaPredicted RBP21.28■■□□□ 1
HLA-C-205ENST00000466892 TNS1Q9HBL0 1735 aaKnown RBP21.27■■□□□ 1
HLA-C-205ENST00000466892 GOLGA2Q08379 1002 aa21.27■■□□□ 1
HLA-C-205ENST00000466892 ASAP1Q9ULH1 1129 aa21.27■■□□□ 1
HLA-C-205ENST00000466892 PAPPAQ13219 1627 aa21.26■□□□□ 0.99
HLA-C-205ENST00000466892 RGPD3A6NKT7 1758 aaPredicted RBP21.26■□□□□ 0.99
HLA-C-205ENST00000466892 RGPD4Q7Z3J3 1758 aa21.26■□□□□ 0.99
HLA-C-205ENST00000466892 SLC27A3Q5K4L6 730 aa21.26■□□□□ 0.99
HLA-C-205ENST00000466892 VSIG10Q8N0Z9 540 aa21.26■□□□□ 0.99
HLA-C-205ENST00000466892 MYH16Q9H6N6 1097 aa21.26■□□□□ 0.99
HLA-C-205ENST00000466892 TSPYL4Q9UJ04 414 aa21.26■□□□□ 0.99
HLA-C-205ENST00000466892 SALL2Q9Y467 1007 aaPredicted RBP21.26■□□□□ 0.99
HLA-C-205ENST00000466892 ITGB4P16144 1822 aa21.26■□□□□ 0.99
HLA-C-205ENST00000466892 BTAF1O14981 1849 aa21.25■□□□□ 0.99
HLA-C-205ENST00000466892 E9PSI1 815 aa21.24■□□□□ 0.99
HLA-C-205ENST00000466892 FMNL2Q96PY5 1086 aa21.24■□□□□ 0.99
HLA-C-205ENST00000466892 KCPQ6ZWJ8 1503 aa21.23■□□□□ 0.99
HLA-C-205ENST00000466892 LOC102724428A0A0B4J2F2 783 aa21.22■□□□□ 0.99
HLA-C-205ENST00000466892 SIK1P57059 783 aa21.22■□□□□ 0.99
HLA-C-205ENST00000466892 SLC39A6Q13433 755 aa21.22■□□□□ 0.99
HLA-C-205ENST00000466892 MBIPQ9NS73 344 aa21.22■□□□□ 0.99
HLA-C-205ENST00000466892 SOS1Q07889 1333 aaPredicted RBP21.22■□□□□ 0.99
HLA-C-205ENST00000466892 HEG1Q9ULI3 1381 aa21.22■□□□□ 0.99
HLA-C-205ENST00000466892 ZNF831Q5JPB2 1677 aa21.21■□□□□ 0.99
HLA-C-205ENST00000466892 VIRMAQ69YN4 1812 aaKnown RBP21.21■□□□□ 0.99
HLA-C-205ENST00000466892 SENP3-EIF4A1A0A087X0R7 540 aa21.21■□□□□ 0.99
HLA-C-205ENST00000466892 EIF4A1P60842 406 aaKnown RBP21.21■□□□□ 0.99
HLA-C-205ENST00000466892 CAMKK2Q96RR4 588 aa21.21■□□□□ 0.99
HLA-C-205ENST00000466892 TEX13AQ9BXU3 409 aaPredicted RBP21.21■□□□□ 0.99
HLA-C-205ENST00000466892 LAS1LQ9Y4W2 734 aaKnown RBP21.21■□□□□ 0.99
HLA-C-205ENST00000466892 CICQ96RK0 1608 aaPredicted RBP21.2■□□□□ 0.98
HLA-C-205ENST00000466892 HOXB7P09629 217 aa21.2■□□□□ 0.98
HLA-C-205ENST00000466892 TXNRD1Q16881 649 aa21.2■□□□□ 0.98
HLA-C-205ENST00000466892 ZNF496Q96IT1 587 aaPredicted RBP21.2■□□□□ 0.98
HLA-C-205ENST00000466892 CHMP4AQ9BY43 222 aa21.2■□□□□ 0.98
HLA-C-205ENST00000466892 KDM3BQ7LBC6 1761 aa21.2■□□□□ 0.98
HLA-C-205ENST00000466892 UBR2Q8IWV8 1755 aa21.19■□□□□ 0.98
HLA-C-205ENST00000466892 SNRPA1P09661 255 aaKnown RBP21.19■□□□□ 0.98
HLA-C-205ENST00000466892 MIS18AQ9NYP9 233 aa21.19■□□□□ 0.98
HLA-C-205ENST00000466892 CCNL1Q9UK58 526 aaPredicted RBP21.19■□□□□ 0.98
HLA-C-205ENST00000466892 PTCD1O75127 700 aaKnown RBP21.18■□□□□ 0.98
HLA-C-205ENST00000466892 SLFN5Q08AF3 891 aa21.18■□□□□ 0.98
HLA-C-205ENST00000466892 RBM42Q9BTD8 480 aaKnown RBP21.18■□□□□ 0.98
HLA-C-205ENST00000466892 FANCIQ9NVI1 1328 aa21.18■□□□□ 0.98
HLA-C-205ENST00000466892 LY75O60449 1722 aa21.18■□□□□ 0.98
HLA-C-205ENST00000466892 KCNQ3O43525 872 aa21.17■□□□□ 0.98
HLA-C-205ENST00000466892 ATP6V1AP38606 617 aa21.17■□□□□ 0.98
HLA-C-205ENST00000466892 EN1Q05925 392 aaPredicted RBP21.17■□□□□ 0.98
HLA-C-205ENST00000466892 TRMT2AQ8IZ69 625 aaKnown RBP21.16■□□□□ 0.98
HLA-C-205ENST00000466892 PROM2Q8N271 834 aa21.16■□□□□ 0.98
HLA-C-205ENST00000466892 GIGYF1O75420 1035 aaPredicted RBP21.15■□□□□ 0.98
HLA-C-205ENST00000466892 SLC4A9Q96Q91 983 aa21.15■□□□□ 0.98
HLA-C-205ENST00000466892 SPINK5Q9NQ38 1064 aaPredicted RBP21.15■□□□□ 0.98
HLA-C-205ENST00000466892 SOCS7O14512 581 aa21.14■□□□□ 0.97
HLA-C-205ENST00000466892 STARD3NLO95772 234 aa21.14■□□□□ 0.97
HLA-C-205ENST00000466892 DEFB132Q7Z7B7 95 aa21.14■□□□□ 0.97
HLA-C-205ENST00000466892 TSR2Q969E8 191 aaKnown RBP21.14■□□□□ 0.97
HLA-C-205ENST00000466892 EZH2Q15910 746 aaKnown RBP21.13■□□□□ 0.97
HLA-C-205ENST00000466892 CT47B1P0C2W7 299 aaPredicted RBP21.12■□□□□ 0.97
HLA-C-205ENST00000466892 RC3H1Q5TC82 1133 aaKnown RBP21.12■□□□□ 0.97
HLA-C-205ENST00000466892 LRRC4BQ9NT99 713 aa21.12■□□□□ 0.97
HLA-C-205ENST00000466892 C5P01031 1676 aa21.12■□□□□ 0.97
HLA-C-205ENST00000466892 ERBB4Q15303 1308 aa21.11■□□□□ 0.97
HLA-C-205ENST00000466892 CNTNAP4Q9C0A0 1308 aa21.11■□□□□ 0.97
HLA-C-205ENST00000466892 ITPK1Q13572 414 aa21.11■□□□□ 0.97
HLA-C-205ENST00000466892 DUSP27Q5VZP5 1158 aa21.11■□□□□ 0.97
HLA-C-205ENST00000466892 CDCA7LQ96GN5 454 aa21.11■□□□□ 0.97
HLA-C-205ENST00000466892 RREB1Q92766 1687 aa21.1■□□□□ 0.97
HLA-C-205ENST00000466892 DNAJC10Q8IXB1 793 aa21.1■□□□□ 0.97
HLA-C-205ENST00000466892 ZNF428Q96B54 188 aa21.1■□□□□ 0.97
HLA-C-205ENST00000466892 CYP19A1P11511 503 aaPredicted RBP21.09■□□□□ 0.97
HLA-C-205ENST00000466892 KAT6BQ8WYB5 2073 aa21.09■□□□□ 0.97
HLA-C-205ENST00000466892 TWISTNBQ3B726 338 aaPredicted RBP21.08■□□□□ 0.97
HLA-C-205ENST00000466892 C8orf58Q8NAV2 365 aa21.08■□□□□ 0.97
HLA-C-205ENST00000466892 LINC00116Q8NCU8 138 aa21.08■□□□□ 0.97
HLA-C-205ENST00000466892 TJP1Q07157 1748 aa21.07■□□□□ 0.96
HLA-C-205ENST00000466892 EXOSC9Q06265 439 aaKnown RBP21.07■□□□□ 0.96
HLA-C-205ENST00000466892 NBPF14Q5TI25 921 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms