RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 VASH1Q7L8A9 365 aaPredicted RBP3.68□□□□□ -1.82
NUCKS1-202ENST00000464938 Q8N3U1 123 aa3.68□□□□□ -1.82
NUCKS1-202ENST00000464938 CDCA7Q9BWT1 371 aaPredicted RBP3.68□□□□□ -1.82
NUCKS1-202ENST00000464938 MKRN1Q9UHC7 482 aaKnown RBP3.68□□□□□ -1.82
NUCKS1-202ENST00000464938 PCDHGA11Q9Y5H2 935 aa3.68□□□□□ -1.82
NUCKS1-202ENST00000464938 ACIN1Q9UKV3 1341 aaKnown RBP3.68□□□□□ -1.82
NUCKS1-202ENST00000464938 TMEM88BA6NKF7 163 aa3.67□□□□□ -1.82
NUCKS1-202ENST00000464938 ATP5J2-PTCD1G3V325 749 aa3.67□□□□□ -1.82
NUCKS1-202ENST00000464938 ERVH48-1M5A8F1 160 aa3.67□□□□□ -1.82
NUCKS1-202ENST00000464938 LILRA1O75019 489 aa3.67□□□□□ -1.82
NUCKS1-202ENST00000464938 FSHRP23945 695 aa3.67□□□□□ -1.82
NUCKS1-202ENST00000464938 MARSP56192 900 aaKnown RBP3.67□□□□□ -1.82
NUCKS1-202ENST00000464938 ERVK-9P63128 1117 aa3.67□□□□□ -1.82
NUCKS1-202ENST00000464938 CLDN10P78369 228 aa3.67□□□□□ -1.82
NUCKS1-202ENST00000464938 SRSF11Q05519 484 aaKnown RBP3.67□□□□□ -1.82
NUCKS1-202ENST00000464938 FAM69CQ0P6D2 419 aa3.67□□□□□ -1.82
NUCKS1-202ENST00000464938 ARID5BQ14865 1188 aa3.67□□□□□ -1.82
NUCKS1-202ENST00000464938 DEPDC4Q8N2C3 294 aa3.67□□□□□ -1.82
NUCKS1-202ENST00000464938 VWA5B2Q8N398 1253 aa3.67□□□□□ -1.82
NUCKS1-202ENST00000464938 RETREG2Q8NC44 543 aa3.67□□□□□ -1.82
NUCKS1-202ENST00000464938 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
NUCKS1-202ENST00000464938 ZMIZ1Q9ULJ6 1067 aa3.67□□□□□ -1.82
NUCKS1-202ENST00000464938 DOLKQ9UPQ8 538 aa3.67□□□□□ -1.82
NUCKS1-202ENST00000464938 FIGNL2A6NMB9 653 aa3.66□□□□□ -1.82
NUCKS1-202ENST00000464938 USP4Q13107 963 aa3.66□□□□□ -1.82
NUCKS1-202ENST00000464938 EML3Q32P44 896 aa3.66□□□□□ -1.82
NUCKS1-202ENST00000464938 CRTC2Q53ET0 693 aaPredicted RBP3.66□□□□□ -1.82
NUCKS1-202ENST00000464938 CDCA8Q53HL2 280 aa3.66□□□□□ -1.82
NUCKS1-202ENST00000464938 SIX5Q8N196 739 aa3.66□□□□□ -1.82
NUCKS1-202ENST00000464938 LARGE2Q8N3Y3 721 aa3.66□□□□□ -1.82
NUCKS1-202ENST00000464938 USTQ9Y2C2 406 aa3.66□□□□□ -1.82
NUCKS1-202ENST00000464938 PCDHB11Q9Y5F2 797 aa3.66□□□□□ -1.82
NUCKS1-202ENST00000464938 EMILIN1Q9Y6C2 1016 aa3.66□□□□□ -1.82
NUCKS1-202ENST00000464938 USP17L15C9J2P7 530 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 USP17L10C9JJH3 530 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 USP17L13C9JLJ4 530 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 USP17L12C9JPN9 530 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 USP17L11C9JVI0 530 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 USP17L21D6R901 530 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 USP17L18D6R9N7 530 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 USP17L22D6RA61 530 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 USP17L17D6RBQ6 530 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 USP17L19D6RCP7 530 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 USP17L20D6RJB6 530 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 K7ELQ4 463 aaPredicted RBP3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 ADD1P35611 737 aaKnown RBP3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 SCTRP47872 440 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 DHX9Q08211 1270 aaKnown RBP3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 PDE4CQ08493 712 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 USP17L24Q0WX57 530 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 CBLBQ13191 982 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 PPP1R26Q5T8A7 1209 aaPredicted RBP3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 SV2AQ7L0J3 742 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 TRIM50Q86XT4 487 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 CCDC116Q8IYX3 515 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 OGFOD1Q8N543 542 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 SIRT1Q96EB6 747 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 OSBPL3Q9H4L5 887 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 CUEDC1Q9NWM3 386 aaPredicted RBP3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 KIAA1024Q9UPX6 916 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 NOD1Q9Y239 953 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 CNTNAP5Q8WYK1 1306 aa3.65□□□□□ -1.83
NUCKS1-202ENST00000464938 WASLO00401 505 aaPredicted RBP3.64□□□□□ -1.83
NUCKS1-202ENST00000464938 RASA1P20936 1047 aa3.64□□□□□ -1.83
NUCKS1-202ENST00000464938 CTSOP43234 321 aaPredicted RBP3.64□□□□□ -1.83
NUCKS1-202ENST00000464938 ATP1A2P50993 1020 aa3.64□□□□□ -1.83
NUCKS1-202ENST00000464938 GTF2IP78347 998 aa3.64□□□□□ -1.83
NUCKS1-202ENST00000464938 OXLD1Q5BKU9 147 aa3.64□□□□□ -1.83
NUCKS1-202ENST00000464938 CC2D2BQ6DHV5 1058 aa3.64□□□□□ -1.83
NUCKS1-202ENST00000464938 LARP1Q6PKG0 1096 aaKnown RBP3.64□□□□□ -1.83
NUCKS1-202ENST00000464938 ANKMY2Q8IV38 441 aa3.64□□□□□ -1.83
NUCKS1-202ENST00000464938 KDF1Q8NAX2 398 aaPredicted RBP3.64□□□□□ -1.83
NUCKS1-202ENST00000464938 STK32AQ8WU08 396 aa3.64□□□□□ -1.83
NUCKS1-202ENST00000464938 TMPRSS4Q9NRS4 437 aa3.64□□□□□ -1.83
NUCKS1-202ENST00000464938 DNAAF2Q9NVR5 837 aaKnown RBP3.64□□□□□ -1.83
NUCKS1-202ENST00000464938 SLAIN2Q9P270 581 aa3.64□□□□□ -1.83
NUCKS1-202ENST00000464938 NOVA2Q9UNW9 492 aaKnown RBP3.64□□□□□ -1.83
NUCKS1-202ENST00000464938 CDC14CA4D256 554 aa3.63□□□□□ -1.83
NUCKS1-202ENST00000464938 M0R2N6 131 aa3.63□□□□□ -1.83
NUCKS1-202ENST00000464938 CSB-PGBD3P0DP91 1061 aa3.63□□□□□ -1.83
NUCKS1-202ENST00000464938 PDIA4P13667 645 aaKnown RBP3.63□□□□□ -1.83
NUCKS1-202ENST00000464938 ITGB7P26010 798 aa3.63□□□□□ -1.83
NUCKS1-202ENST00000464938 LCE3BQ5TA77 95 aa3.63□□□□□ -1.83
NUCKS1-202ENST00000464938 TMEM164Q5U3C3 297 aa3.63□□□□□ -1.83
NUCKS1-202ENST00000464938 CCDC102BQ68D86 513 aa3.63□□□□□ -1.83
NUCKS1-202ENST00000464938 ZNF784Q8NCA9 323 aaPredicted RBP3.63□□□□□ -1.83
NUCKS1-202ENST00000464938 RNF217Q8TC41 542 aa3.63□□□□□ -1.83
NUCKS1-202ENST00000464938 CLP1Q92989 425 aaKnown RBP3.63□□□□□ -1.83
NUCKS1-202ENST00000464938 TRIM52Q96A61 297 aa3.63□□□□□ -1.83
NUCKS1-202ENST00000464938 SLC4A9Q96Q91 983 aa3.63□□□□□ -1.83
NUCKS1-202ENST00000464938 HRH3Q9Y5N1 445 aa3.63□□□□□ -1.83
NUCKS1-202ENST00000464938 TMEM229AB2RXF0 380 aa3.62□□□□□ -1.83
NUCKS1-202ENST00000464938 BAG6P46379 1132 aa3.62□□□□□ -1.83
NUCKS1-202ENST00000464938 SCNN1DP51172 638 aa3.62□□□□□ -1.83
NUCKS1-202ENST00000464938 MAP3K10Q02779 954 aa3.62□□□□□ -1.83
NUCKS1-202ENST00000464938 DPYDQ12882 1025 aa3.62□□□□□ -1.83
NUCKS1-202ENST00000464938 SWI5Q1ZZU3 235 aa3.62□□□□□ -1.83
NUCKS1-202ENST00000464938 PHLDB3Q6NSJ2 640 aa3.62□□□□□ -1.83
NUCKS1-202ENST00000464938 FAM200AQ8TCP9 573 aa3.62□□□□□ -1.83
NUCKS1-202ENST00000464938 CYLDQ9NQC7 956 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms