RNA–Protein interactions for RNA: ENST00000462983.5

TRAPPC12-214, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-214ENST00000462983 SLC27A3Q5K4L6 730 aa12.16□□□□□ -0.46
TRAPPC12-214ENST00000462983 GAS2L2Q8NHY3 880 aa12.16□□□□□ -0.46
TRAPPC12-214ENST00000462983 SMARCC1Q92922 1105 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC12-214ENST00000462983 PNNQ9H307 717 aaKnown RBP12.16□□□□□ -0.46
TRAPPC12-214ENST00000462983 STK32BQ9NY57 414 aa12.16□□□□□ -0.46
TRAPPC12-214ENST00000462983 CASZ1Q86V15 1759 aa12.15□□□□□ -0.46
TRAPPC12-214ENST00000462983 QSER1Q2KHR3 1735 aa12.15□□□□□ -0.46
TRAPPC12-214ENST00000462983 NFATC2IPQ8NCF5 419 aa12.15□□□□□ -0.46
TRAPPC12-214ENST00000462983 MAP3K5Q99683 1374 aa12.15□□□□□ -0.46
TRAPPC12-214ENST00000462983 GNAT3A8MTJ3 354 aa12.14□□□□□ -0.47
TRAPPC12-214ENST00000462983 SLC15A2Q16348 729 aa12.14□□□□□ -0.47
TRAPPC12-214ENST00000462983 ZNF827Q17R98 1081 aa12.14□□□□□ -0.47
TRAPPC12-214ENST00000462983 ATG3Q9NT62 314 aa12.14□□□□□ -0.47
TRAPPC12-214ENST00000462983 C4BP0C0L5 1744 aa12.14□□□□□ -0.47
TRAPPC12-214ENST00000462983 UBR3Q6ZT12 1888 aa12.13□□□□□ -0.47
TRAPPC12-214ENST00000462983 MYH14Q7Z406 1995 aaKnown RBP12.13□□□□□ -0.47
TRAPPC12-214ENST00000462983 RBM42Q9BTD8 480 aaKnown RBP12.13□□□□□ -0.47
TRAPPC12-214ENST00000462983 SLC52A2Q9HAB3 445 aa12.13□□□□□ -0.47
TRAPPC12-214ENST00000462983 ADAMTS8Q9UP79 889 aa12.13□□□□□ -0.47
TRAPPC12-214ENST00000462983 MRC1P22897 1456 aa12.13□□□□□ -0.47
TRAPPC12-214ENST00000462983 COL5A3P25940 1745 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC12-214ENST00000462983 LOC102724428A0A0B4J2F2 783 aa12.12□□□□□ -0.47
TRAPPC12-214ENST00000462983 SIK1P57059 783 aa12.12□□□□□ -0.47
TRAPPC12-214ENST00000462983 IL17REQ8NFR9 667 aa12.12□□□□□ -0.47
TRAPPC12-214ENST00000462983 PLEKHF1Q96S99 279 aa12.12□□□□□ -0.47
TRAPPC12-214ENST00000462983 PDGFDQ9GZP0 370 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC12-214ENST00000462983 UBR2Q8IWV8 1755 aa12.11□□□□□ -0.47
TRAPPC12-214ENST00000462983 ZNF831Q5JPB2 1677 aa12.11□□□□□ -0.47
TRAPPC12-214ENST00000462983 PTCD1O75127 700 aaKnown RBP12.11□□□□□ -0.47
TRAPPC12-214ENST00000462983 ATP6V1AP38606 617 aa12.11□□□□□ -0.47
TRAPPC12-214ENST00000462983 SLC39A6Q13433 755 aa12.11□□□□□ -0.47
TRAPPC12-214ENST00000462983 AKT1S1Q96B36 256 aa12.11□□□□□ -0.47
TRAPPC12-214ENST00000462983 TJP1Q07157 1748 aa12.11□□□□□ -0.47
TRAPPC12-214ENST00000462983 LRP5O75197 1615 aa12.11□□□□□ -0.47
TRAPPC12-214ENST00000462983 MAPK8IP3Q9UPT6 1336 aa12.11□□□□□ -0.47
TRAPPC12-214ENST00000462983 TEFQ10587 303 aa12.1□□□□□ -0.47
TRAPPC12-214ENST00000462983 ITPK1Q13572 414 aa12.1□□□□□ -0.47
TRAPPC12-214ENST00000462983 DCTN1Q14203 1278 aa12.1□□□□□ -0.47
TRAPPC12-214ENST00000462983 MCM10Q7L590 875 aa12.1□□□□□ -0.47
TRAPPC12-214ENST00000462983 CCDC146Q8IYE0 955 aa12.1□□□□□ -0.47
TRAPPC12-214ENST00000462983 TFCP2L1Q9NZI6 479 aa12.1□□□□□ -0.47
TRAPPC12-214ENST00000462983 LINC00116Q8NCU8 138 aa12.09□□□□□ -0.47
TRAPPC12-214ENST00000462983 RTF1Q92541 710 aaKnown RBP12.09□□□□□ -0.47
TRAPPC12-214ENST00000462983 SLC4A9Q96Q91 983 aa12.09□□□□□ -0.47
TRAPPC12-214ENST00000462983 CEMIPQ8WUJ3 1361 aa12.08□□□□□ -0.48
TRAPPC12-214ENST00000462983 SRCAPQ6ZRS2 3230 aa12.08□□□□□ -0.48
TRAPPC12-214ENST00000462983 ZBTB7AO95365 584 aa12.08□□□□□ -0.48
TRAPPC12-214ENST00000462983 FAM9BQ8IZU0 186 aa12.08□□□□□ -0.48
TRAPPC12-214ENST00000462983 PNPLA7Q6ZV29 1317 aa12.08□□□□□ -0.48
TRAPPC12-214ENST00000462983 KCPQ6ZWJ8 1503 aa12.07□□□□□ -0.48
TRAPPC12-214ENST00000462983 NFE2L2Q16236 605 aa12.07□□□□□ -0.48
TRAPPC12-214ENST00000462983 SMIM5Q71RC9 77 aa12.07□□□□□ -0.48
TRAPPC12-214ENST00000462983 AK7Q96M32 723 aa12.07□□□□□ -0.48
TRAPPC12-214ENST00000462983 CICQ96RK0 1608 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC12-214ENST00000462983 MSH5O43196 834 aa12.06□□□□□ -0.48
TRAPPC12-214ENST00000462983 PHF14O94880 888 aa12.06□□□□□ -0.48
TRAPPC12-214ENST00000462983 NEUROD2Q15784 382 aa12.06□□□□□ -0.48
TRAPPC12-214ENST00000462983 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
TRAPPC12-214ENST00000462983 TTC5Q8N0Z6 440 aa12.06□□□□□ -0.48
TRAPPC12-214ENST00000462983 RUNDC1Q96C34 613 aa12.06□□□□□ -0.48
TRAPPC12-214ENST00000462983 THUMPD2Q9BTF0 503 aaKnown RBP12.06□□□□□ -0.48
TRAPPC12-214ENST00000462983 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC12-214ENST00000462983 RRP7AQ9Y3A4 280 aaKnown RBP12.06□□□□□ -0.48
TRAPPC12-214ENST00000462983 KDM3BQ7LBC6 1761 aa12.05□□□□□ -0.48
TRAPPC12-214ENST00000462983 BTBD11A6QL63 1104 aa12.05□□□□□ -0.48
TRAPPC12-214ENST00000462983 GNPATO15228 680 aa12.05□□□□□ -0.48
TRAPPC12-214ENST00000462983 HTATSF1O43719 755 aaKnown RBP12.05□□□□□ -0.48
TRAPPC12-214ENST00000462983 HMGB2P26583 209 aaKnown RBP12.05□□□□□ -0.48
TRAPPC12-214ENST00000462983 RIPK4P57078 832 aa12.05□□□□□ -0.48
TRAPPC12-214ENST00000462983 AMIGO3Q86WK7 504 aa12.05□□□□□ -0.48
TRAPPC12-214ENST00000462983 COL23A1Q86Y22 540 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC12-214ENST00000462983 SPON1Q9HCB6 807 aa12.05□□□□□ -0.48
TRAPPC12-214ENST00000462983 C4AP0C0L4 1744 aa12.04□□□□□ -0.48
TRAPPC12-214ENST00000462983 COL24A1Q17RW2 1714 aa12.04□□□□□ -0.48
TRAPPC12-214ENST00000462983 KCNQ3O43525 872 aa12.04□□□□□ -0.48
TRAPPC12-214ENST00000462983 TMPOP42166 694 aaKnown RBP12.04□□□□□ -0.48
TRAPPC12-214ENST00000462983 ZNF790Q6PG37 636 aa12.04□□□□□ -0.48
TRAPPC12-214ENST00000462983 DNAJC10Q8IXB1 793 aa12.04□□□□□ -0.48
TRAPPC12-214ENST00000462983 CRKLP46109 303 aaKnown RBP12.03□□□□□ -0.48
TRAPPC12-214ENST00000462983 ZNF496Q96IT1 587 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC12-214ENST00000462983 MTFR1LQ9H019 292 aa12.03□□□□□ -0.48
TRAPPC12-214ENST00000462983 MIS18AQ9NYP9 233 aa12.03□□□□□ -0.48
TRAPPC12-214ENST00000462983 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.02□□□□□ -0.49
TRAPPC12-214ENST00000462983 LMOD3Q0VAK6 560 aa12.02□□□□□ -0.49
TRAPPC12-214ENST00000462983 TAF7Q15545 349 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC12-214ENST00000462983 PPP1R1BQ9UD71 204 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC12-214ENST00000462983 ZNF521Q96K83 1311 aa12.02□□□□□ -0.49
TRAPPC12-214ENST00000462983 CNTNAP4Q9C0A0 1308 aa12.02□□□□□ -0.49
TRAPPC12-214ENST00000462983 SENP3-EIF4A1A0A087X0R7 540 aa12.01□□□□□ -0.49
TRAPPC12-214ENST00000462983 APAF1O14727 1248 aa12.01□□□□□ -0.49
TRAPPC12-214ENST00000462983 SSFA2P28290 1259 aa12.01□□□□□ -0.49
TRAPPC12-214ENST00000462983 MSL1Q68DK7 614 aa12.01□□□□□ -0.49
TRAPPC12-214ENST00000462983 NGEFQ8N5V2 710 aa12.01□□□□□ -0.49
TRAPPC12-214ENST00000462983 FLAD1Q8NFF5 587 aa12.01□□□□□ -0.49
TRAPPC12-214ENST00000462983 RTCBQ9Y3I0 505 aaKnown RBP12.01□□□□□ -0.49
TRAPPC12-214ENST00000462983 HEG1Q9ULI3 1381 aa12.01□□□□□ -0.49
TRAPPC12-214ENST00000462983 LAMB4A4D0S4 1761 aa12□□□□□ -0.49
TRAPPC12-214ENST00000462983 CYP19A1P11511 503 aaPredicted RBP12□□□□□ -0.49
TRAPPC12-214ENST00000462983 PTGER2P43116 358 aa12□□□□□ -0.49
TRAPPC12-214ENST00000462983 CCDC27Q2M243 656 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms