RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 GRPEL1Q9HAV7 217 aa14.39□□□□□ -0.11
TRAPPC3-205ENST00000462715 MAPK8IP3Q9UPT6 1336 aa14.38□□□□□ -0.11
TRAPPC3-205ENST00000462715 DDB1Q16531 1140 aa14.38□□□□□ -0.11
TRAPPC3-205ENST00000462715 SULT6B1Q6IMI4 303 aa14.38□□□□□ -0.11
TRAPPC3-205ENST00000462715 PLEKHG2Q9H7P9 1386 aa14.38□□□□□ -0.11
TRAPPC3-205ENST00000462715 LRRC37A3O60309 1634 aa14.37□□□□□ -0.11
TRAPPC3-205ENST00000462715 KDRP35968 1356 aa14.37□□□□□ -0.11
TRAPPC3-205ENST00000462715 MEGF6O75095 1541 aa14.37□□□□□ -0.11
TRAPPC3-205ENST00000462715 DDX11L8A8MPP1 907 aa14.37□□□□□ -0.11
TRAPPC3-205ENST00000462715 EXOC5O00471 708 aa14.37□□□□□ -0.11
TRAPPC3-205ENST00000462715 OVOS2A0A0G2JMS6 1433 aa14.37□□□□□ -0.11
TRAPPC3-205ENST00000462715 TNS2Q63HR2 1409 aa14.37□□□□□ -0.11
TRAPPC3-205ENST00000462715 A0A0U1RQG5 324 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC3-205ENST00000462715 U2AF1L5P0DN76 240 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC3-205ENST00000462715 U2AF1Q01081 240 aaKnown RBP eCLIP14.36□□□□□ -0.11
TRAPPC3-205ENST00000462715 KIAA1211Q6ZU35 1233 aa14.36□□□□□ -0.11
TRAPPC3-205ENST00000462715 HS1BP3Q53T59 392 aa14.35□□□□□ -0.11
TRAPPC3-205ENST00000462715 KRT27Q7Z3Y8 459 aa14.35□□□□□ -0.11
TRAPPC3-205ENST00000462715 HMOX1P09601 288 aa14.35□□□□□ -0.11
TRAPPC3-205ENST00000462715 AEBP1Q8IUX7 1158 aa14.35□□□□□ -0.11
TRAPPC3-205ENST00000462715 PANK2Q9BZ23 570 aa14.35□□□□□ -0.11
TRAPPC3-205ENST00000462715 ZCRB1Q8TBF4 217 aaKnown RBP14.34□□□□□ -0.11
TRAPPC3-205ENST00000462715 BRWD3Q6RI45 1802 aa14.34□□□□□ -0.11
TRAPPC3-205ENST00000462715 TRAK2O60296 914 aa14.34□□□□□ -0.11
TRAPPC3-205ENST00000462715 WDR43Q15061 677 aaKnown RBP eCLIP14.34□□□□□ -0.11
TRAPPC3-205ENST00000462715 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.34□□□□□ -0.11
TRAPPC3-205ENST00000462715 SPG7Q9UQ90 795 aa14.34□□□□□ -0.11
TRAPPC3-205ENST00000462715 RGS3P49796 1198 aa14.33□□□□□ -0.12
TRAPPC3-205ENST00000462715 CCDC173Q0VFZ6 552 aa14.33□□□□□ -0.12
TRAPPC3-205ENST00000462715 PPP1R9BQ96SB3 815 aa14.33□□□□□ -0.12
TRAPPC3-205ENST00000462715 CHMP5Q9NZZ3 219 aa14.33□□□□□ -0.12
TRAPPC3-205ENST00000462715 ERBB4Q15303 1308 aa14.33□□□□□ -0.12
TRAPPC3-205ENST00000462715 FCHSD2O94868 740 aa14.32□□□□□ -0.12
TRAPPC3-205ENST00000462715 AMOTQ4VCS5 1084 aa14.32□□□□□ -0.12
TRAPPC3-205ENST00000462715 PLEKHO1Q53GL0 409 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC3-205ENST00000462715 UPF2Q9HAU5 1272 aaKnown RBP14.32□□□□□ -0.12
TRAPPC3-205ENST00000462715 PKD1L3Q7Z443 1732 aa14.32□□□□□ -0.12
TRAPPC3-205ENST00000462715 PCDH11XQ9BZA7 1347 aa14.32□□□□□ -0.12
TRAPPC3-205ENST00000462715 PCDH11YQ9BZA8 1340 aa14.32□□□□□ -0.12
TRAPPC3-205ENST00000462715 SKOR2Q2VWA4 1001 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC3-205ENST00000462715 ZSCAN30Q86W11 494 aa14.32□□□□□ -0.12
TRAPPC3-205ENST00000462715 ILDR2Q71H61 639 aa14.31□□□□□ -0.12
TRAPPC3-205ENST00000462715 DDX54Q8TDD1 881 aaKnown RBP14.3□□□□□ -0.12
TRAPPC3-205ENST00000462715 DYNC1I1O14576 645 aa14.3□□□□□ -0.12
TRAPPC3-205ENST00000462715 PRKAR2BP31323 418 aa14.3□□□□□ -0.12
TRAPPC3-205ENST00000462715 RIPK4P57078 832 aa14.3□□□□□ -0.12
TRAPPC3-205ENST00000462715 DMTNQ08495 405 aa14.3□□□□□ -0.12
TRAPPC3-205ENST00000462715 FAM196AQ6ZSG2 479 aa14.29□□□□□ -0.12
TRAPPC3-205ENST00000462715 MARCH10Q8NA82 808 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC3-205ENST00000462715 SHANK3Q9BYB0 1731 aa14.29□□□□□ -0.12
TRAPPC3-205ENST00000462715 PDIA4P13667 645 aaKnown RBP14.29□□□□□ -0.12
TRAPPC3-205ENST00000462715 PLIN1O60240 522 aa14.28□□□□□ -0.12
TRAPPC3-205ENST00000462715 TBC1D32Q96NH3 1257 aa14.28□□□□□ -0.12
TRAPPC3-205ENST00000462715 IBTKQ9P2D0 1353 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC3-205ENST00000462715 KIF20AO95235 890 aa14.27□□□□□ -0.12
TRAPPC3-205ENST00000462715 ZNF530Q6P9A1 599 aaPredicted RBP14.27□□□□□ -0.12
TRAPPC3-205ENST00000462715 IFNL2Q8IZJ0 200 aa14.27□□□□□ -0.12
TRAPPC3-205ENST00000462715 EP400Q96L91 3159 aa14.27□□□□□ -0.12
TRAPPC3-205ENST00000462715 BCL9O00512 1426 aa14.27□□□□□ -0.12
TRAPPC3-205ENST00000462715 C1orf141Q5JVX7 400 aa14.27□□□□□ -0.13
TRAPPC3-205ENST00000462715 GTPBP4Q9BZE4 634 aaKnown RBP14.27□□□□□ -0.13
TRAPPC3-205ENST00000462715 SLKQ9H2G2 1235 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC3-205ENST00000462715 FAM182BQ5T319 152 aa14.26□□□□□ -0.13
TRAPPC3-205ENST00000462715 SKAP1Q86WV1 359 aa14.26□□□□□ -0.13
TRAPPC3-205ENST00000462715 GAS2L2Q8NHY3 880 aa14.26□□□□□ -0.13
TRAPPC3-205ENST00000462715 CYP27B1O15528 508 aa14.26□□□□□ -0.13
TRAPPC3-205ENST00000462715 HSP90AB1P08238 724 aaKnown RBP14.26□□□□□ -0.13
TRAPPC3-205ENST00000462715 CSPP1Q1MSJ5 1256 aa14.26□□□□□ -0.13
TRAPPC3-205ENST00000462715 ADAMTS8Q9UP79 889 aa14.26□□□□□ -0.13
TRAPPC3-205ENST00000462715 PHKG2P15735 406 aa14.25□□□□□ -0.13
TRAPPC3-205ENST00000462715 TAF3Q5VWG9 929 aa14.25□□□□□ -0.13
TRAPPC3-205ENST00000462715 CDCA7LQ96GN5 454 aa14.25□□□□□ -0.13
TRAPPC3-205ENST00000462715 TBC1D2Q9BYX2 928 aa14.25□□□□□ -0.13
TRAPPC3-205ENST00000462715 ZNF500O60304 480 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC3-205ENST00000462715 MSNP26038 577 aaKnown RBP14.24□□□□□ -0.13
TRAPPC3-205ENST00000462715 MCM5P33992 734 aa14.24□□□□□ -0.13
TRAPPC3-205ENST00000462715 MTHFSDQ2M296 383 aaKnown RBP14.24□□□□□ -0.13
TRAPPC3-205ENST00000462715 AKAP4Q5JQC9 854 aa14.24□□□□□ -0.13
TRAPPC3-205ENST00000462715 ANP32BQ92688 251 aaKnown RBP14.24□□□□□ -0.13
TRAPPC3-205ENST00000462715 NKX1-1Q15270 411 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC3-205ENST00000462715 PHACTR3Q96KR7 559 aa14.24□□□□□ -0.13
TRAPPC3-205ENST00000462715 PLEKHF1Q96S99 279 aa14.24□□□□□ -0.13
TRAPPC3-205ENST00000462715 CIZ1Q9ULV3 898 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC3-205ENST00000462715 RUNDC1Q96C34 613 aa14.23□□□□□ -0.13
TRAPPC3-205ENST00000462715 C20orf194Q5TEA3 1177 aa14.22□□□□□ -0.13
TRAPPC3-205ENST00000462715 DCAF5Q96JK2 942 aa14.22□□□□□ -0.13
TRAPPC3-205ENST00000462715 TAF7LQ5H9L4 462 aa14.22□□□□□ -0.13
TRAPPC3-205ENST00000462715 CCDC94Q9BW85 323 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC3-205ENST00000462715 MAP3K5Q99683 1374 aa14.22□□□□□ -0.13
TRAPPC3-205ENST00000462715 CCDC146Q8IYE0 955 aa14.21□□□□□ -0.13
TRAPPC3-205ENST00000462715 DOT1LQ8TEK3 1739 aa14.21□□□□□ -0.14
TRAPPC3-205ENST00000462715 GNAT3A8MTJ3 354 aa14.21□□□□□ -0.14
TRAPPC3-205ENST00000462715 LETM1O95202 739 aaPredicted RBP14.21□□□□□ -0.14
TRAPPC3-205ENST00000462715 CANXP27824 592 aaKnown RBP14.21□□□□□ -0.14
TRAPPC3-205ENST00000462715 CCDC125Q86Z20 511 aa14.21□□□□□ -0.14
TRAPPC3-205ENST00000462715 NHSQ6T4R5 1651 aa14.2□□□□□ -0.14
TRAPPC3-205ENST00000462715 SF3B2Q13435 895 aaKnown RBP14.2□□□□□ -0.14
TRAPPC3-205ENST00000462715 NFE2L2Q16236 605 aa14.2□□□□□ -0.14
TRAPPC3-205ENST00000462715 ACSBG1Q96GR2 724 aa14.2□□□□□ -0.14
TRAPPC3-205ENST00000462715 BCL11BQ9C0K0 894 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms