RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 NFE2L2Q16236 605 aa12.6□□□□□ -0.39
PKP4-208ENST00000462335 SLC15A2Q16348 729 aa12.6□□□□□ -0.39
PKP4-208ENST00000462335 CCDC146Q8IYE0 955 aa12.6□□□□□ -0.39
PKP4-208ENST00000462335 PROM2Q8N271 834 aa12.6□□□□□ -0.39
PKP4-208ENST00000462335 ATG3Q9NT62 314 aa12.6□□□□□ -0.39
PKP4-208ENST00000462335 RIPK4P57078 832 aa12.59□□□□□ -0.39
PKP4-208ENST00000462335 NPM2Q86SE8 214 aaKnown RBP12.59□□□□□ -0.39
PKP4-208ENST00000462335 RUNDC1Q96C34 613 aa12.59□□□□□ -0.39
PKP4-208ENST00000462335 ADAMTS8Q9UP79 889 aa12.59□□□□□ -0.39
PKP4-208ENST00000462335 ITGB4P16144 1822 aa12.59□□□□□ -0.39
PKP4-208ENST00000462335 BTBD11A6QL63 1104 aa12.58□□□□□ -0.4
PKP4-208ENST00000462335 MCM10Q7L590 875 aa12.58□□□□□ -0.4
PKP4-208ENST00000462335 PPP1R1BQ9UD71 204 aaPredicted RBP12.58□□□□□ -0.4
PKP4-208ENST00000462335 RGPD3A6NKT7 1758 aaPredicted RBP12.57□□□□□ -0.4
PKP4-208ENST00000462335 RGPD4Q7Z3J3 1758 aa12.57□□□□□ -0.4
PKP4-208ENST00000462335 FLAD1Q8NFF5 587 aa12.57□□□□□ -0.4
PKP4-208ENST00000462335 IL17REQ8NFR9 667 aa12.57□□□□□ -0.4
PKP4-208ENST00000462335 LRRC4BQ9NT99 713 aa12.57□□□□□ -0.4
PKP4-208ENST00000462335 KDM6AO15550 1401 aaPredicted RBP12.56□□□□□ -0.4
PKP4-208ENST00000462335 SLC39A6Q13433 755 aa12.56□□□□□ -0.4
PKP4-208ENST00000462335 TAF7Q15545 349 aaPredicted RBP12.56□□□□□ -0.4
PKP4-208ENST00000462335 PNISRQ8TF01 805 aaKnown RBP12.56□□□□□ -0.4
PKP4-208ENST00000462335 DCTN1Q14203 1278 aa12.55□□□□□ -0.4
PKP4-208ENST00000462335 PLEKHF1Q96S99 279 aa12.55□□□□□ -0.4
PKP4-208ENST00000462335 SPON1Q9HCB6 807 aa12.55□□□□□ -0.4
PKP4-208ENST00000462335 RRP7AQ9Y3A4 280 aaKnown RBP12.55□□□□□ -0.4
PKP4-208ENST00000462335 LAS1LQ9Y4W2 734 aaKnown RBP12.55□□□□□ -0.4
PKP4-208ENST00000462335 NUP188Q5SRE5 1749 aa12.54□□□□□ -0.4
PKP4-208ENST00000462335 SCN11AQ9UI33 1791 aa12.54□□□□□ -0.4
PKP4-208ENST00000462335 PHF14O94880 888 aa12.54□□□□□ -0.4
PKP4-208ENST00000462335 STARD3NLO95772 234 aa12.54□□□□□ -0.4
PKP4-208ENST00000462335 TMPOP42166 694 aaKnown RBP12.54□□□□□ -0.4
PKP4-208ENST00000462335 DIEXFQ68CQ4 756 aaKnown RBP12.54□□□□□ -0.4
PKP4-208ENST00000462335 FAM9BQ8IZU0 186 aa12.54□□□□□ -0.4
PKP4-208ENST00000462335 FMNL2Q96PY5 1086 aa12.54□□□□□ -0.4
PKP4-208ENST00000462335 TEX13AQ9BXU3 409 aaPredicted RBP12.54□□□□□ -0.4
PKP4-208ENST00000462335 ANO8Q9HCE9 1232 aaPredicted RBP12.54□□□□□ -0.4
PKP4-208ENST00000462335 RREB1Q92766 1687 aa12.54□□□□□ -0.4
PKP4-208ENST00000462335 TOGARAM1Q9Y4F4 1720 aa12.54□□□□□ -0.4
PKP4-208ENST00000462335 GNPATO15228 680 aa12.53□□□□□ -0.4
PKP4-208ENST00000462335 ZBTB7AO95365 584 aa12.53□□□□□ -0.4
PKP4-208ENST00000462335 CALD1Q05682 793 aaKnown RBP12.53□□□□□ -0.4
PKP4-208ENST00000462335 ZNF790Q6PG37 636 aa12.53□□□□□ -0.4
PKP4-208ENST00000462335 ARXQ96QS3 562 aa12.53□□□□□ -0.4
PKP4-208ENST00000462335 RTCBQ9Y3I0 505 aaKnown RBP12.53□□□□□ -0.4
PKP4-208ENST00000462335 POLD1P28340 1107 aa12.52□□□□□ -0.41
PKP4-208ENST00000462335 ZNF827Q17R98 1081 aa12.52□□□□□ -0.41
PKP4-208ENST00000462335 TRAPPC3LQ5T215 181 aa12.52□□□□□ -0.41
PKP4-208ENST00000462335 AKT1S1Q96B36 256 aa12.52□□□□□ -0.41
PKP4-208ENST00000462335 ATF5Q9Y2D1 282 aaPredicted RBP12.52□□□□□ -0.41
PKP4-208ENST00000462335 APAF1O14727 1248 aa12.51□□□□□ -0.41
PKP4-208ENST00000462335 RFC4P35249 363 aa12.51□□□□□ -0.41
PKP4-208ENST00000462335 VSIG10Q8N0Z9 540 aa12.51□□□□□ -0.41
PKP4-208ENST00000462335 LINC00116Q8NCU8 138 aa12.51□□□□□ -0.41
PKP4-208ENST00000462335 SLC16A10Q8TF71 515 aa12.51□□□□□ -0.41
PKP4-208ENST00000462335 TSPYL4Q9UJ04 414 aa12.51□□□□□ -0.41
PKP4-208ENST00000462335 LY75O60449 1722 aa12.51□□□□□ -0.41
PKP4-208ENST00000462335 VIRMAQ69YN4 1812 aaKnown RBP12.51□□□□□ -0.41
PKP4-208ENST00000462335 DCAF8L1A6NGE4 600 aa12.5□□□□□ -0.41
PKP4-208ENST00000462335 ITPK1Q13572 414 aa12.5□□□□□ -0.41
PKP4-208ENST00000462335 CCDC184Q52MB2 194 aa12.5□□□□□ -0.41
PKP4-208ENST00000462335 RC3H1Q5TC82 1133 aaKnown RBP12.5□□□□□ -0.41
PKP4-208ENST00000462335 THUMPD2Q9BTF0 503 aaKnown RBP12.5□□□□□ -0.41
PKP4-208ENST00000462335 MTFR1LQ9H019 292 aa12.5□□□□□ -0.41
PKP4-208ENST00000462335 MIS18AQ9NYP9 233 aa12.5□□□□□ -0.41
PKP4-208ENST00000462335 ZNF330Q9Y3S2 320 aaPredicted RBP12.5□□□□□ -0.41
PKP4-208ENST00000462335 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.49□□□□□ -0.41
PKP4-208ENST00000462335 SNRPA1P09661 255 aaKnown RBP12.49□□□□□ -0.41
PKP4-208ENST00000462335 SSFA2P28290 1259 aa12.49□□□□□ -0.41
PKP4-208ENST00000462335 DNAJC10Q8IXB1 793 aa12.49□□□□□ -0.41
PKP4-208ENST00000462335 ZNF496Q96IT1 587 aaPredicted RBP12.49□□□□□ -0.41
PKP4-208ENST00000462335 CEMIPQ8WUJ3 1361 aa12.48□□□□□ -0.41
PKP4-208ENST00000462335 ZPR1O75312 459 aa12.48□□□□□ -0.41
PKP4-208ENST00000462335 CANXP27824 592 aaKnown RBP12.48□□□□□ -0.41
PKP4-208ENST00000462335 CRKLP46109 303 aaKnown RBP12.48□□□□□ -0.41
PKP4-208ENST00000462335 KLHL34Q8N239 644 aa12.48□□□□□ -0.41
PKP4-208ENST00000462335 CCDC87Q9NVE4 849 aa12.48□□□□□ -0.41
PKP4-208ENST00000462335 SALL2Q9Y467 1007 aaPredicted RBP12.48□□□□□ -0.41
PKP4-208ENST00000462335 C5P01031 1676 aa12.48□□□□□ -0.41
PKP4-208ENST00000462335 PNPLA7Q6ZV29 1317 aa12.47□□□□□ -0.41
PKP4-208ENST00000462335 CNTNAP4Q9C0A0 1308 aa12.47□□□□□ -0.41
PKP4-208ENST00000462335 RPS6KA4O75676 772 aa12.47□□□□□ -0.41
PKP4-208ENST00000462335 ADRA2BP18089 450 aa12.47□□□□□ -0.41
PKP4-208ENST00000462335 COL23A1Q86Y22 540 aaPredicted RBP12.47□□□□□ -0.41
PKP4-208ENST00000462335 DLG5Q8TDM6 1919 aa12.47□□□□□ -0.41
PKP4-208ENST00000462335 HEG1Q9ULI3 1381 aa12.46□□□□□ -0.41
PKP4-208ENST00000462335 A0A087WZG4 1122 aa12.46□□□□□ -0.41
PKP4-208ENST00000462335 SLC4A9Q96Q91 983 aa12.46□□□□□ -0.41
PKP4-208ENST00000462335 PDGFDQ9GZP0 370 aaPredicted RBP12.46□□□□□ -0.41
PKP4-208ENST00000462335 BABAM1Q9NWV8 329 aa12.46□□□□□ -0.41
PKP4-208ENST00000462335 MRC1P22897 1456 aa12.46□□□□□ -0.42
PKP4-208ENST00000462335 C4BP0C0L5 1744 aa12.45□□□□□ -0.42
PKP4-208ENST00000462335 SENP3-EIF4A1A0A087X0R7 540 aa12.45□□□□□ -0.42
PKP4-208ENST00000462335 CCER2I3L3R5 266 aa12.45□□□□□ -0.42
PKP4-208ENST00000462335 KCNQ3O43525 872 aa12.45□□□□□ -0.42
PKP4-208ENST00000462335 CYP19A1P11511 503 aaPredicted RBP12.45□□□□□ -0.42
PKP4-208ENST00000462335 MSL1Q68DK7 614 aa12.45□□□□□ -0.42
PKP4-208ENST00000462335 TAF1LQ8IZX4 1826 aa12.44□□□□□ -0.42
PKP4-208ENST00000462335 GNAI1P63096 354 aa12.44□□□□□ -0.42
PKP4-208ENST00000462335 NLGN1Q8N2Q7 840 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms