RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 DOT1LQ8TEK3 1739 aa12.52□□□□□ -0.41
BRCA1-207ENST00000461798 PHKG2P15735 406 aa12.52□□□□□ -0.41
BRCA1-207ENST00000461798 PIGBQ92521 554 aa12.52□□□□□ -0.41
BRCA1-207ENST00000461798 ARXQ96QS3 562 aa12.52□□□□□ -0.41
BRCA1-207ENST00000461798 SYT17Q9BSW7 474 aa12.52□□□□□ -0.41
BRCA1-207ENST00000461798 CLEC11AQ9Y240 323 aa12.52□□□□□ -0.41
BRCA1-207ENST00000461798 LY75O60449 1722 aa12.51□□□□□ -0.41
BRCA1-207ENST00000461798 PALLDQ8WX93 1383 aa12.51□□□□□ -0.41
BRCA1-207ENST00000461798 MAP3K5Q99683 1374 aa12.51□□□□□ -0.41
BRCA1-207ENST00000461798 PKD1L3Q7Z443 1732 aa12.51□□□□□ -0.41
BRCA1-207ENST00000461798 PLEKHO1Q53GL0 409 aaPredicted RBP12.5□□□□□ -0.41
BRCA1-207ENST00000461798 SPDYE1Q8NFV5 336 aaPredicted RBP12.5□□□□□ -0.41
BRCA1-207ENST00000461798 FHDC1Q9C0D6 1143 aaPredicted RBP12.5□□□□□ -0.41
BRCA1-207ENST00000461798 IL13P35225 146 aa12.49□□□□□ -0.41
BRCA1-207ENST00000461798 AMOTQ4VCS5 1084 aa12.49□□□□□ -0.41
BRCA1-207ENST00000461798 COL23A1Q86Y22 540 aaPredicted RBP12.49□□□□□ -0.41
BRCA1-207ENST00000461798 FLAD1Q8NFF5 587 aa12.49□□□□□ -0.41
BRCA1-207ENST00000461798 ERVV-2B6SEH9 535 aa12.48□□□□□ -0.41
BRCA1-207ENST00000461798 HSP90AB1P08238 724 aaKnown RBP12.48□□□□□ -0.41
BRCA1-207ENST00000461798 POLD1P28340 1107 aa12.48□□□□□ -0.41
BRCA1-207ENST00000461798 TMOD3Q9NYL9 352 aa12.48□□□□□ -0.41
BRCA1-207ENST00000461798 QSER1Q2KHR3 1735 aa12.48□□□□□ -0.41
BRCA1-207ENST00000461798 KDRP35968 1356 aa12.47□□□□□ -0.41
BRCA1-207ENST00000461798 LOC102724428A0A0B4J2F2 783 aa12.47□□□□□ -0.41
BRCA1-207ENST00000461798 SIK1P57059 783 aa12.47□□□□□ -0.41
BRCA1-207ENST00000461798 DCAF5Q96JK2 942 aa12.47□□□□□ -0.41
BRCA1-207ENST00000461798 NPC1L1Q9UHC9 1359 aa12.46□□□□□ -0.41
BRCA1-207ENST00000461798 MTHFSP49914 203 aa12.46□□□□□ -0.41
BRCA1-207ENST00000461798 AEBP1Q8IUX7 1158 aa12.46□□□□□ -0.41
BRCA1-207ENST00000461798 ATG3Q9NT62 314 aa12.46□□□□□ -0.41
BRCA1-207ENST00000461798 ASAP1Q9ULH1 1129 aa12.46□□□□□ -0.41
BRCA1-207ENST00000461798 TOGARAM1Q9Y4F4 1720 aa12.45□□□□□ -0.42
BRCA1-207ENST00000461798 POTEIP0CG38 1075 aa12.45□□□□□ -0.42
BRCA1-207ENST00000461798 SULT6B1Q6IMI4 303 aa12.45□□□□□ -0.42
BRCA1-207ENST00000461798 COL24A1Q17RW2 1714 aa12.45□□□□□ -0.42
BRCA1-207ENST00000461798 ZNF530Q6P9A1 599 aaPredicted RBP12.44□□□□□ -0.42
BRCA1-207ENST00000461798 YY1P25490 414 aa12.43□□□□□ -0.42
BRCA1-207ENST00000461798 ITPK1Q13572 414 aa12.43□□□□□ -0.42
BRCA1-207ENST00000461798 LINC00116Q8NCU8 138 aa12.43□□□□□ -0.42
BRCA1-207ENST00000461798 AK7Q96M32 723 aa12.43□□□□□ -0.42
BRCA1-207ENST00000461798 ITGB4P16144 1822 aa12.43□□□□□ -0.42
BRCA1-207ENST00000461798 SSFA2P28290 1259 aa12.42□□□□□ -0.42
BRCA1-207ENST00000461798 ATP6V1AP38606 617 aa12.42□□□□□ -0.42
BRCA1-207ENST00000461798 AMIGO3Q86WK7 504 aa12.42□□□□□ -0.42
BRCA1-207ENST00000461798 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.41□□□□□ -0.42
BRCA1-207ENST00000461798 KDM6AO15550 1401 aaPredicted RBP12.41□□□□□ -0.42
BRCA1-207ENST00000461798 CABP4P57796 275 aa12.41□□□□□ -0.42
BRCA1-207ENST00000461798 C1orf141Q5JVX7 400 aa12.41□□□□□ -0.42
BRCA1-207ENST00000461798 CC2D1BQ5T0F9 858 aaKnown RBP12.41□□□□□ -0.42
BRCA1-207ENST00000461798 RC3H1Q5TC82 1133 aaKnown RBP12.41□□□□□ -0.42
BRCA1-207ENST00000461798 CHADLQ6NUI6 762 aa12.41□□□□□ -0.42
BRCA1-207ENST00000461798 SLC4A9Q96Q91 983 aa12.41□□□□□ -0.42
BRCA1-207ENST00000461798 TUBGCP6Q96RT7 1819 aa12.4□□□□□ -0.42
BRCA1-207ENST00000461798 DIAPH1O60610 1272 aaKnown RBP12.4□□□□□ -0.42
BRCA1-207ENST00000461798 AKAP4Q5JQC9 854 aa12.4□□□□□ -0.42
BRCA1-207ENST00000461798 CD2APQ9Y5K6 639 aa12.4□□□□□ -0.42
BRCA1-207ENST00000461798 C5P01031 1676 aa12.4□□□□□ -0.42
BRCA1-207ENST00000461798 C4BP0C0L5 1744 aa12.4□□□□□ -0.43
BRCA1-207ENST00000461798 NFATC2IPQ8NCF5 419 aa12.39□□□□□ -0.43
BRCA1-207ENST00000461798 TAF1LQ8IZX4 1826 aa12.39□□□□□ -0.43
BRCA1-207ENST00000461798 GNPATO15228 680 aa12.38□□□□□ -0.43
BRCA1-207ENST00000461798 MSL1Q68DK7 614 aa12.38□□□□□ -0.43
BRCA1-207ENST00000461798 HMOX1P09601 288 aa12.37□□□□□ -0.43
BRCA1-207ENST00000461798 GPR162Q16538 588 aa12.37□□□□□ -0.43
BRCA1-207ENST00000461798 SMIM5Q71RC9 77 aa12.37□□□□□ -0.43
BRCA1-207ENST00000461798 NLGN2Q8NFZ4 835 aa12.37□□□□□ -0.43
BRCA1-207ENST00000461798 CNTNAP4Q9C0A0 1308 aa12.37□□□□□ -0.43
BRCA1-207ENST00000461798 RPS6KA4O75676 772 aa12.36□□□□□ -0.43
BRCA1-207ENST00000461798 PHF14O94880 888 aa12.36□□□□□ -0.43
BRCA1-207ENST00000461798 MTHFSDQ2M296 383 aaKnown RBP12.36□□□□□ -0.43
BRCA1-207ENST00000461798 TRAPPC3LQ5T215 181 aa12.36□□□□□ -0.43
BRCA1-207ENST00000461798 KLHL34Q8N239 644 aa12.36□□□□□ -0.43
BRCA1-207ENST00000461798 SLC52A2Q9HAB3 445 aa12.36□□□□□ -0.43
BRCA1-207ENST00000461798 LGR6Q9HBX8 967 aa12.36□□□□□ -0.43
BRCA1-207ENST00000461798 RTCBQ9Y3I0 505 aaKnown RBP12.36□□□□□ -0.43
BRCA1-207ENST00000461798 ZNF831Q5JPB2 1677 aa12.35□□□□□ -0.43
BRCA1-207ENST00000461798 RNMTO43148 476 aaKnown RBP12.35□□□□□ -0.43
BRCA1-207ENST00000461798 COL3A1P02461 1466 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-207ENST00000461798 UBR3Q6ZT12 1888 aa12.34□□□□□ -0.43
BRCA1-207ENST00000461798 GRIN3BO60391 1043 aa12.34□□□□□ -0.43
BRCA1-207ENST00000461798 PTCD1O75127 700 aaKnown RBP12.34□□□□□ -0.43
BRCA1-207ENST00000461798 NLGN1Q8N2Q7 840 aa12.34□□□□□ -0.43
BRCA1-207ENST00000461798 ARHGEF1Q92888 912 aaKnown RBP12.34□□□□□ -0.43
BRCA1-207ENST00000461798 SSUH2Q9Y2M2 353 aa12.34□□□□□ -0.43
BRCA1-207ENST00000461798 U2SURPO15042 1029 aaKnown RBP12.32□□□□□ -0.44
BRCA1-207ENST00000461798 YBX3P16989 372 aaKnown RBP eCLIP12.32□□□□□ -0.44
BRCA1-207ENST00000461798 ZNF784Q8NCA9 323 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-207ENST00000461798 MMP10P09238 476 aa12.31□□□□□ -0.44
BRCA1-207ENST00000461798 GYS1P13807 737 aa12.31□□□□□ -0.44
BRCA1-207ENST00000461798 PPP2R1AP30153 589 aa12.31□□□□□ -0.44
BRCA1-207ENST00000461798 RFC4P35249 363 aa12.31□□□□□ -0.44
BRCA1-207ENST00000461798 CRKLP46109 303 aaKnown RBP12.31□□□□□ -0.44
BRCA1-207ENST00000461798 INTS5Q6P9B9 1019 aaKnown RBP12.31□□□□□ -0.44
BRCA1-207ENST00000461798 GAS2L2Q8NHY3 880 aa12.31□□□□□ -0.44
BRCA1-207ENST00000461798 CFAP53Q96M91 514 aa12.31□□□□□ -0.44
BRCA1-207ENST00000461798 MRC1P22897 1456 aa12.31□□□□□ -0.44
BRCA1-207ENST00000461798 CNGB1Q14028 1251 aaPredicted RBP12.3□□□□□ -0.44
BRCA1-207ENST00000461798 PELP1Q8IZL8 1130 aaKnown RBP12.3□□□□□ -0.44
BRCA1-207ENST00000461798 VSIG10Q8N0Z9 540 aa12.3□□□□□ -0.44
BRCA1-207ENST00000461798 IL17REQ8NFR9 667 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms