RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 RICTORQ6R327 1708 aa17.3■□□□□ 0.36
NCL-207ENST00000461347 ZNF830Q96NB3 372 aaPredicted RBP17.3■□□□□ 0.36
NCL-207ENST00000461347 CCDC192P0DO97 292 aa17.29■□□□□ 0.36
NCL-207ENST00000461347 OFD1O75665 1012 aa17.29■□□□□ 0.36
NCL-207ENST00000461347 ZKSCAN5Q9Y2L8 839 aa17.29■□□□□ 0.36
NCL-207ENST00000461347 HCLS1P14317 486 aaPredicted RBP17.29■□□□□ 0.36
NCL-207ENST00000461347 CDK11BP21127 795 aaKnown RBP17.29■□□□□ 0.36
NCL-207ENST00000461347 CHAMP1Q96JM3 812 aa17.29■□□□□ 0.36
NCL-207ENST00000461347 ESYT1Q9BSJ8 1104 aa17.29■□□□□ 0.36
NCL-207ENST00000461347 SPG7Q9UQ90 795 aa17.29■□□□□ 0.36
NCL-207ENST00000461347 KIDINS220Q9ULH0 1771 aa17.28■□□□□ 0.36
NCL-207ENST00000461347 CEBPZQ03701 1054 aaKnown RBP17.28■□□□□ 0.36
NCL-207ENST00000461347 DIP2BQ9P265 1576 aa17.28■□□□□ 0.36
NCL-207ENST00000461347 PDRG1Q9NUG6 133 aa17.28■□□□□ 0.36
NCL-207ENST00000461347 VWDEQ8N2E2 1590 aa17.28■□□□□ 0.36
NCL-207ENST00000461347 KRT85P78386 507 aa17.28■□□□□ 0.36
NCL-207ENST00000461347 CCDC183Q5T5S1 534 aa17.28■□□□□ 0.36
NCL-207ENST00000461347 PHF23Q9BUL5 403 aaPredicted RBP17.28■□□□□ 0.36
NCL-207ENST00000461347 SIL1Q9H173 461 aa17.28■□□□□ 0.36
NCL-207ENST00000461347 PDCP20941 246 aa17.27■□□□□ 0.36
NCL-207ENST00000461347 PRDM10Q9NQV6 1147 aa17.27■□□□□ 0.36
NCL-207ENST00000461347 PSMA5P28066 241 aa17.27■□□□□ 0.35
NCL-207ENST00000461347 EIF4A2Q14240 407 aaKnown RBP17.27■□□□□ 0.35
NCL-207ENST00000461347 DDX58O95786 925 aaKnown RBP17.26■□□□□ 0.35
NCL-207ENST00000461347 PRPF40BQ6NWY9 871 aaKnown RBP17.26■□□□□ 0.35
NCL-207ENST00000461347 KIF1BPQ96EK5 621 aa17.26■□□□□ 0.35
NCL-207ENST00000461347 LMBRD1Q9NUN5 540 aa17.26■□□□□ 0.35
NCL-207ENST00000461347 GNAT3A8MTJ3 354 aa17.26■□□□□ 0.35
NCL-207ENST00000461347 CAMK4Q16566 473 aa17.26■□□□□ 0.35
NCL-207ENST00000461347 PPIP5K1Q6PFW1 1433 aa17.25■□□□□ 0.35
NCL-207ENST00000461347 RIC3Q7Z5B4 369 aa17.25■□□□□ 0.35
NCL-207ENST00000461347 FOXO3O43524 673 aa17.25■□□□□ 0.35
NCL-207ENST00000461347 ADCY5O95622 1261 aa17.25■□□□□ 0.35
NCL-207ENST00000461347 TPM4P67936 248 aa17.25■□□□□ 0.35
NCL-207ENST00000461347 ZNF771Q7L3S4 317 aaPredicted RBP17.25■□□□□ 0.35
NCL-207ENST00000461347 TNMDQ9H2S6 317 aa17.25■□□□□ 0.35
NCL-207ENST00000461347 MROH1Q8NDA8 1641 aa17.25■□□□□ 0.35
NCL-207ENST00000461347 NPATQ14207 1427 aa17.25■□□□□ 0.35
NCL-207ENST00000461347 IL13P35225 146 aa17.25■□□□□ 0.35
NCL-207ENST00000461347 AACSQ86V21 672 aa17.25■□□□□ 0.35
NCL-207ENST00000461347 MSH6P52701 1360 aa17.24■□□□□ 0.35
NCL-207ENST00000461347 G2E3Q7L622 706 aa17.24■□□□□ 0.35
NCL-207ENST00000461347 MCM5P33992 734 aa17.24■□□□□ 0.35
NCL-207ENST00000461347 CCDC73Q6ZRK6 1079 aa17.24■□□□□ 0.35
NCL-207ENST00000461347 USP48Q86UV5 1035 aa17.24■□□□□ 0.35
NCL-207ENST00000461347 LIMCH1Q9UPQ0 1083 aa17.24■□□□□ 0.35
NCL-207ENST00000461347 ZNF445P59923 1031 aa17.24■□□□□ 0.35
NCL-207ENST00000461347 FRMPD1Q5SYB0 1578 aa17.24■□□□□ 0.35
NCL-207ENST00000461347 STX6O43752 255 aa17.23■□□□□ 0.35
NCL-207ENST00000461347 TPM3P06753 285 aa17.23■□□□□ 0.35
NCL-207ENST00000461347 TAF7Q15545 349 aaPredicted RBP17.23■□□□□ 0.35
NCL-207ENST00000461347 TPD52L1Q16890 204 aaPredicted RBP17.23■□□□□ 0.35
NCL-207ENST00000461347 USHBP1Q8N6Y0 703 aa17.23■□□□□ 0.35
NCL-207ENST00000461347 NUP62CLQ9H1M0 184 aa17.23■□□□□ 0.35
NCL-207ENST00000461347 ZFYVE9O95405 1425 aa17.23■□□□□ 0.35
NCL-207ENST00000461347 BLOC1S2Q6QNY1 142 aa17.23■□□□□ 0.35
NCL-207ENST00000461347 PPP1R42Q7Z4L9 355 aa17.23■□□□□ 0.35
NCL-207ENST00000461347 TTC12Q9H892 705 aaPredicted RBP17.23■□□□□ 0.35
NCL-207ENST00000461347 YTHDC2Q9H6S0 1430 aaKnown RBP17.23■□□□□ 0.35
NCL-207ENST00000461347 GIMAP6Q6P9H5 292 aa17.23■□□□□ 0.35
NCL-207ENST00000461347 CNPY2Q9Y2B0 182 aa17.23■□□□□ 0.35
NCL-207ENST00000461347 PSME1Q06323 249 aa17.22■□□□□ 0.35
NCL-207ENST00000461347 SIRT2Q8IXJ6 389 aa17.22■□□□□ 0.35
NCL-207ENST00000461347 RNF17Q9BXT8 1623 aaKnown RBP17.22■□□□□ 0.35
NCL-207ENST00000461347 ABCC4O15439 1325 aa17.22■□□□□ 0.35
NCL-207ENST00000461347 GLRX3O76003 335 aaKnown RBP17.22■□□□□ 0.35
NCL-207ENST00000461347 TMEM63CQ9P1W3 806 aa17.22■□□□□ 0.35
NCL-207ENST00000461347 ACEP12821 1306 aa17.21■□□□□ 0.35
NCL-207ENST00000461347 ANXA1P04083 346 aa17.21■□□□□ 0.35
NCL-207ENST00000461347 DNAJC2Q99543 621 aaKnown RBP17.21■□□□□ 0.35
NCL-207ENST00000461347 SPATA32Q96LK8 384 aa17.21■□□□□ 0.35
NCL-207ENST00000461347 NEUROD6Q96NK8 337 aa17.21■□□□□ 0.35
NCL-207ENST00000461347 MYOM2P54296 1465 aa17.21■□□□□ 0.35
NCL-207ENST00000461347 DTNBO60941 627 aa17.21■□□□□ 0.34
NCL-207ENST00000461347 HS1BP3Q53T59 392 aa17.21■□□□□ 0.34
NCL-207ENST00000461347 TAF7LQ5H9L4 462 aa17.21■□□□□ 0.34
NCL-207ENST00000461347 ZNF530Q6P9A1 599 aaPredicted RBP17.21■□□□□ 0.34
NCL-207ENST00000461347 SDF4Q9BRK5 362 aa17.21■□□□□ 0.34
NCL-207ENST00000461347 NOL7Q9UMY1 257 aaKnown RBP17.21■□□□□ 0.34
NCL-207ENST00000461347 RAB11FIP3O75154 756 aa17.2■□□□□ 0.34
NCL-207ENST00000461347 CKAP2LQ8IYA6 745 aa17.2■□□□□ 0.34
NCL-207ENST00000461347 ZSCAN31Q96LW9 406 aaPredicted RBP17.2■□□□□ 0.34
NCL-207ENST00000461347 MADDQ8WXG6 1647 aa17.2■□□□□ 0.34
NCL-207ENST00000461347 ERBB4Q15303 1308 aa17.2■□□□□ 0.34
NCL-207ENST00000461347 RIMS2Q9UQ26 1411 aa17.2■□□□□ 0.34
NCL-207ENST00000461347 CLTCL1P53675 1640 aa17.2■□□□□ 0.34
NCL-207ENST00000461347 MAP3K11Q16584 847 aa17.2■□□□□ 0.34
NCL-207ENST00000461347 DYNC1I1O14576 645 aa17.19■□□□□ 0.34
NCL-207ENST00000461347 CHMLP26374 656 aa17.19■□□□□ 0.34
NCL-207ENST00000461347 ERC1Q8IUD2 1116 aa17.19■□□□□ 0.34
NCL-207ENST00000461347 GJB2P29033 226 aa17.19■□□□□ 0.34
NCL-207ENST00000461347 ANAPC15P60006 121 aa17.19■□□□□ 0.34
NCL-207ENST00000461347 NPHP1O15259 732 aa17.19■□□□□ 0.34
NCL-207ENST00000461347 CBX1P83916 185 aa17.19■□□□□ 0.34
NCL-207ENST00000461347 RHPN1Q8TCX5 695 aa17.19■□□□□ 0.34
NCL-207ENST00000461347 FMNL2Q96PY5 1086 aa17.19■□□□□ 0.34
NCL-207ENST00000461347 TFIP11Q9UBB9 837 aaKnown RBP17.19■□□□□ 0.34
NCL-207ENST00000461347 UBE2HP62256 183 aa17.18■□□□□ 0.34
NCL-207ENST00000461347 MAPK8IP2Q13387 824 aaPredicted RBP17.18■□□□□ 0.34
NCL-207ENST00000461347 MTHFSDQ2M296 383 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms