RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 KCNQ2O43526 872 aa13.3□□□□□ -0.28
UPF2-204ENST00000460569 CALD1Q05682 793 aaKnown RBP13.3□□□□□ -0.28
UPF2-204ENST00000460569 NFATC2IPQ8NCF5 419 aa13.29□□□□□ -0.28
UPF2-204ENST00000460569 LAS1LQ9Y4W2 734 aaKnown RBP13.29□□□□□ -0.28
UPF2-204ENST00000460569 ZBED9Q6R2W3 1325 aa13.29□□□□□ -0.28
UPF2-204ENST00000460569 ZNF521Q96K83 1311 aa13.29□□□□□ -0.28
UPF2-204ENST00000460569 UBR2Q8IWV8 1755 aa13.29□□□□□ -0.28
UPF2-204ENST00000460569 TRIM37O94972 964 aa13.28□□□□□ -0.28
UPF2-204ENST00000460569 PIGBQ92521 554 aa13.28□□□□□ -0.28
UPF2-204ENST00000460569 BTBD11A6QL63 1104 aa13.27□□□□□ -0.29
UPF2-204ENST00000460569 TAF7Q15545 349 aaPredicted RBP13.27□□□□□ -0.29
UPF2-204ENST00000460569 PTF1AQ7RTS3 328 aa13.27□□□□□ -0.29
UPF2-204ENST00000460569 WDR63Q8IWG1 891 aa13.27□□□□□ -0.29
UPF2-204ENST00000460569 IL16Q14005 1332 aa13.27□□□□□ -0.29
UPF2-204ENST00000460569 LY75O60449 1722 aa13.26□□□□□ -0.29
UPF2-204ENST00000460569 GNAI1P63096 354 aa13.26□□□□□ -0.29
UPF2-204ENST00000460569 GOLGA2Q08379 1002 aa13.26□□□□□ -0.29
UPF2-204ENST00000460569 BCL11BQ9C0K0 894 aaPredicted RBP13.26□□□□□ -0.29
UPF2-204ENST00000460569 IFT57Q9NWB7 429 aa13.26□□□□□ -0.29
UPF2-204ENST00000460569 TSPYL4Q9UJ04 414 aa13.26□□□□□ -0.29
UPF2-204ENST00000460569 RGPD3A6NKT7 1758 aaPredicted RBP13.25□□□□□ -0.29
UPF2-204ENST00000460569 RGPD4Q7Z3J3 1758 aa13.25□□□□□ -0.29
UPF2-204ENST00000460569 KCPQ6ZWJ8 1503 aa13.25□□□□□ -0.29
UPF2-204ENST00000460569 SLC39A6Q13433 755 aa13.25□□□□□ -0.29
UPF2-204ENST00000460569 TTC5Q8N0Z6 440 aa13.25□□□□□ -0.29
UPF2-204ENST00000460569 CFAP44Q96MT7 982 aa13.25□□□□□ -0.29
UPF2-204ENST00000460569 MIS18AQ9NYP9 233 aa13.25□□□□□ -0.29
UPF2-204ENST00000460569 C5P01031 1676 aa13.24□□□□□ -0.29
UPF2-204ENST00000460569 PALLDQ8WX93 1383 aa13.24□□□□□ -0.29
UPF2-204ENST00000460569 ZNF853P0CG23 659 aa13.24□□□□□ -0.29
UPF2-204ENST00000460569 ILDR2Q71H61 639 aa13.24□□□□□ -0.29
UPF2-204ENST00000460569 ASAP1Q9ULH1 1129 aa13.24□□□□□ -0.29
UPF2-204ENST00000460569 EP400Q96L91 3159 aa13.24□□□□□ -0.29
UPF2-204ENST00000460569 LAMB4A4D0S4 1761 aa13.23□□□□□ -0.29
UPF2-204ENST00000460569 FANCIQ9NVI1 1328 aa13.23□□□□□ -0.29
UPF2-204ENST00000460569 TJP1Q07157 1748 aa13.23□□□□□ -0.29
UPF2-204ENST00000460569 E9PSI1 815 aa13.23□□□□□ -0.29
UPF2-204ENST00000460569 CHL1O00533 1208 aa13.23□□□□□ -0.29
UPF2-204ENST00000460569 ZNF790Q6PG37 636 aa13.23□□□□□ -0.29
UPF2-204ENST00000460569 TSR2Q969E8 191 aaKnown RBP13.23□□□□□ -0.29
UPF2-204ENST00000460569 CDCA7LQ96GN5 454 aa13.23□□□□□ -0.29
UPF2-204ENST00000460569 MYH16Q9H6N6 1097 aa13.23□□□□□ -0.29
UPF2-204ENST00000460569 SPINK5Q9NQ38 1064 aaPredicted RBP13.23□□□□□ -0.29
UPF2-204ENST00000460569 MBIPQ9NS73 344 aa13.23□□□□□ -0.29
UPF2-204ENST00000460569 ATG3Q9NT62 314 aa13.23□□□□□ -0.29
UPF2-204ENST00000460569 BABAM1Q9NWV8 329 aa13.23□□□□□ -0.29
UPF2-204ENST00000460569 ZNF831Q5JPB2 1677 aa13.22□□□□□ -0.29
UPF2-204ENST00000460569 CICQ96RK0 1608 aaPredicted RBP13.22□□□□□ -0.29
UPF2-204ENST00000460569 KCNQ3O43525 872 aa13.22□□□□□ -0.29
UPF2-204ENST00000460569 SF3B2Q13435 895 aaKnown RBP13.22□□□□□ -0.29
UPF2-204ENST00000460569 SMARCC1Q92922 1105 aaPredicted RBP13.22□□□□□ -0.29
UPF2-204ENST00000460569 PTCD1O75127 700 aaKnown RBP13.21□□□□□ -0.29
UPF2-204ENST00000460569 APBA3O96018 575 aa13.21□□□□□ -0.29
UPF2-204ENST00000460569 SLFN5Q08AF3 891 aa13.21□□□□□ -0.29
UPF2-204ENST00000460569 COL5A3P25940 1745 aaPredicted RBP13.2□□□□□ -0.3
UPF2-204ENST00000460569 ZNF496Q96IT1 587 aaPredicted RBP13.2□□□□□ -0.3
UPF2-204ENST00000460569 FMNL2Q96PY5 1086 aa13.2□□□□□ -0.3
UPF2-204ENST00000460569 RBM42Q9BTD8 480 aaKnown RBP13.2□□□□□ -0.3
UPF2-204ENST00000460569 RREB1Q92766 1687 aa13.2□□□□□ -0.3
UPF2-204ENST00000460569 TAF1LQ8IZX4 1826 aa13.2□□□□□ -0.3
UPF2-204ENST00000460569 HEG1Q9ULI3 1381 aa13.2□□□□□ -0.3
UPF2-204ENST00000460569 EIF4A1P60842 406 aaKnown RBP13.19□□□□□ -0.3
UPF2-204ENST00000460569 LOC102724428A0A0B4J2F2 783 aa13.18□□□□□ -0.3
UPF2-204ENST00000460569 BAG6P46379 1132 aa13.18□□□□□ -0.3
UPF2-204ENST00000460569 SIK1P57059 783 aa13.18□□□□□ -0.3
UPF2-204ENST00000460569 KRT24Q2M2I5 525 aa13.18□□□□□ -0.3
UPF2-204ENST00000460569 NUP188Q5SRE5 1749 aa13.17□□□□□ -0.3
UPF2-204ENST00000460569 EXOSC9Q06265 439 aaKnown RBP13.17□□□□□ -0.3
UPF2-204ENST00000460569 DUSP27Q5VZP5 1158 aa13.17□□□□□ -0.3
UPF2-204ENST00000460569 CCDC125Q86Z20 511 aa13.17□□□□□ -0.3
UPF2-204ENST00000460569 CCNL1Q9UK58 526 aaPredicted RBP13.17□□□□□ -0.3
UPF2-204ENST00000460569 PLSCR1O15162 318 aa13.16□□□□□ -0.3
UPF2-204ENST00000460569 SNRPA1P09661 255 aaKnown RBP13.16□□□□□ -0.3
UPF2-204ENST00000460569 ATP6V1AP38606 617 aa13.16□□□□□ -0.3
UPF2-204ENST00000460569 TRMT2AQ8IZ69 625 aaKnown RBP13.16□□□□□ -0.3
UPF2-204ENST00000460569 C8orf58Q8NAV2 365 aa13.16□□□□□ -0.3
UPF2-204ENST00000460569 UPF1Q92900 1129 aaKnown RBP eCLIP13.16□□□□□ -0.3
UPF2-204ENST00000460569 SLC4A9Q96Q91 983 aa13.16□□□□□ -0.3
UPF2-204ENST00000460569 ELL2O00472 640 aaPredicted RBP13.15□□□□□ -0.3
UPF2-204ENST00000460569 GIGYF1O75420 1035 aaPredicted RBP13.15□□□□□ -0.3
UPF2-204ENST00000460569 KCNQ4P56696 695 aa13.15□□□□□ -0.3
UPF2-204ENST00000460569 EN1Q05925 392 aaPredicted RBP13.15□□□□□ -0.3
UPF2-204ENST00000460569 TXNRD1Q16881 649 aa13.15□□□□□ -0.3
UPF2-204ENST00000460569 DEFB132Q7Z7B7 95 aa13.15□□□□□ -0.3
UPF2-204ENST00000460569 DNAJC10Q8IXB1 793 aa13.15□□□□□ -0.3
UPF2-204ENST00000460569 VSIG10Q8N0Z9 540 aa13.15□□□□□ -0.3
UPF2-204ENST00000460569 C4BP0C0L5 1744 aa13.15□□□□□ -0.3
UPF2-204ENST00000460569 PRAMEF22A3QJZ6 481 aa13.14□□□□□ -0.31
UPF2-204ENST00000460569 ITPK1Q13572 414 aa13.14□□□□□ -0.31
UPF2-204ENST00000460569 TWISTNBQ3B726 338 aaPredicted RBP13.14□□□□□ -0.31
UPF2-204ENST00000460569 SLC27A3Q5K4L6 730 aa13.14□□□□□ -0.31
UPF2-204ENST00000460569 TSPYL6Q8N831 410 aa13.14□□□□□ -0.31
UPF2-204ENST00000460569 HOXB7P09629 217 aa13.13□□□□□ -0.31
UPF2-204ENST00000460569 EZH2Q15910 746 aaKnown RBP13.13□□□□□ -0.31
UPF2-204ENST00000460569 CAMKK2Q96RR4 588 aa13.13□□□□□ -0.31
UPF2-204ENST00000460569 TEX13AQ9BXU3 409 aaPredicted RBP13.13□□□□□ -0.31
UPF2-204ENST00000460569 SOS1Q07889 1333 aaPredicted RBP13.13□□□□□ -0.31
UPF2-204ENST00000460569 MYH14Q7Z406 1995 aaKnown RBP13.12□□□□□ -0.31
UPF2-204ENST00000460569 EIF2S2P20042 333 aaKnown RBP13.12□□□□□ -0.31
UPF2-204ENST00000460569 HDGFL1Q5TGJ6 251 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms