RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 DCAF5Q96JK2 942 aa20.04■□□□□ 0.8
ATG4B-213ENST00000460211 SMARCC1Q92922 1105 aaPredicted RBP20.03■□□□□ 0.8
ATG4B-213ENST00000460211 TMOD3Q9NYL9 352 aa20.03■□□□□ 0.8
ATG4B-213ENST00000460211 MSL1Q68DK7 614 aa20.02■□□□□ 0.8
ATG4B-213ENST00000460211 YBX3P16989 372 aaKnown RBP eCLIP20.01■□□□□ 0.79
ATG4B-213ENST00000460211 RALBP1Q15311 655 aa20.01■□□□□ 0.79
ATG4B-213ENST00000460211 COL23A1Q86Y22 540 aaPredicted RBP20.01■□□□□ 0.79
ATG4B-213ENST00000460211 ERVV-2B6SEH9 535 aa20■□□□□ 0.79
ATG4B-213ENST00000460211 PIGBQ92521 554 aa20■□□□□ 0.79
ATG4B-213ENST00000460211 AKAP4Q5JQC9 854 aa19.98■□□□□ 0.79
ATG4B-213ENST00000460211 COL3A1P02461 1466 aaPredicted RBP19.98■□□□□ 0.79
ATG4B-213ENST00000460211 C5P01031 1676 aa19.97■□□□□ 0.79
ATG4B-213ENST00000460211 U2AF1L5P0DN76 240 aaPredicted RBP19.97■□□□□ 0.79
ATG4B-213ENST00000460211 CABP4P57796 275 aa19.97■□□□□ 0.79
ATG4B-213ENST00000460211 U2AF1Q01081 240 aaKnown RBP eCLIP19.97■□□□□ 0.79
ATG4B-213ENST00000460211 PALLDQ8WX93 1383 aa19.96■□□□□ 0.79
ATG4B-213ENST00000460211 GRIN3BO60391 1043 aa19.95■□□□□ 0.78
ATG4B-213ENST00000460211 GAS2L2Q8NHY3 880 aa19.95■□□□□ 0.78
ATG4B-213ENST00000460211 MTHFSDQ2M296 383 aaKnown RBP19.94■□□□□ 0.78
ATG4B-213ENST00000460211 FCHSD2O94868 740 aa19.93■□□□□ 0.78
ATG4B-213ENST00000460211 ASAP1Q9ULH1 1129 aa19.93■□□□□ 0.78
ATG4B-213ENST00000460211 TAF1LQ8IZX4 1826 aa19.92■□□□□ 0.78
ATG4B-213ENST00000460211 PRKAR2BP31323 418 aa19.92■□□□□ 0.78
ATG4B-213ENST00000460211 LOC102724428A0A0B4J2F2 783 aa19.91■□□□□ 0.78
ATG4B-213ENST00000460211 ZNF316A6NFI3 1004 aaPredicted RBP19.91■□□□□ 0.78
ATG4B-213ENST00000460211 NEFMP07197 916 aa19.91■□□□□ 0.78
ATG4B-213ENST00000460211 SIK1P57059 783 aa19.91■□□□□ 0.78
ATG4B-213ENST00000460211 ATG3Q9NT62 314 aa19.91■□□□□ 0.78
ATG4B-213ENST00000460211 NFATC2IPQ8NCF5 419 aa19.9■□□□□ 0.78
ATG4B-213ENST00000460211 RSPH6AQ9H0K4 717 aa19.9■□□□□ 0.78
ATG4B-213ENST00000460211 KDM6AO15550 1401 aaPredicted RBP19.9■□□□□ 0.78
ATG4B-213ENST00000460211 ATP10DQ9P241 1426 aa19.9■□□□□ 0.78
ATG4B-213ENST00000460211 TOGARAM1Q9Y4F4 1720 aa19.9■□□□□ 0.78
ATG4B-213ENST00000460211 RNMTO43148 476 aaKnown RBP19.89■□□□□ 0.77
ATG4B-213ENST00000460211 ITGB4P16144 1822 aa19.89■□□□□ 0.77
ATG4B-213ENST00000460211 CEP350Q5VT06 3117 aa19.89■□□□□ 0.77
ATG4B-213ENST00000460211 SMIM5Q71RC9 77 aa19.89■□□□□ 0.77
ATG4B-213ENST00000460211 MYBBP1AQ9BQG0 1328 aaKnown RBP19.89■□□□□ 0.77
ATG4B-213ENST00000460211 PNNQ9H307 717 aaKnown RBP19.89■□□□□ 0.77
ATG4B-213ENST00000460211 WWC3Q9ULE0 1092 aa19.89■□□□□ 0.77
ATG4B-213ENST00000460211 C4BP0C0L5 1744 aa19.88■□□□□ 0.77
ATG4B-213ENST00000460211 GNAT3A8MTJ3 354 aa19.88■□□□□ 0.77
ATG4B-213ENST00000460211 ATP6V1AP38606 617 aa19.88■□□□□ 0.77
ATG4B-213ENST00000460211 LGR6Q9HBX8 967 aa19.88■□□□□ 0.77
ATG4B-213ENST00000460211 PHF14O94880 888 aa19.87■□□□□ 0.77
ATG4B-213ENST00000460211 AMIGO3Q86WK7 504 aa19.87■□□□□ 0.77
ATG4B-213ENST00000460211 ZNF526Q8TF50 670 aaPredicted RBP19.87■□□□□ 0.77
ATG4B-213ENST00000460211 AK7Q96M32 723 aa19.87■□□□□ 0.77
ATG4B-213ENST00000460211 RBM42Q9BTD8 480 aaKnown RBP19.87■□□□□ 0.77
ATG4B-213ENST00000460211 SLC52A2Q9HAB3 445 aa19.87■□□□□ 0.77
ATG4B-213ENST00000460211 CD2APQ9Y5K6 639 aa19.87■□□□□ 0.77
ATG4B-213ENST00000460211 FLAD1Q8NFF5 587 aa19.86■□□□□ 0.77
ATG4B-213ENST00000460211 PHACTR3Q96KR7 559 aa19.86■□□□□ 0.77
ATG4B-213ENST00000460211 UBR3Q6ZT12 1888 aa19.84■□□□□ 0.77
ATG4B-213ENST00000460211 TEFQ10587 303 aa19.84■□□□□ 0.77
ATG4B-213ENST00000460211 RTF1Q92541 710 aaKnown RBP19.84■□□□□ 0.77
ATG4B-213ENST00000460211 GPBP1L1Q9HC44 474 aaPredicted RBP19.84■□□□□ 0.77
ATG4B-213ENST00000460211 PRKRIP1Q9H875 184 aaPredicted RBP19.83■□□□□ 0.77
ATG4B-213ENST00000460211 PTCD1O75127 700 aaKnown RBP19.82■□□□□ 0.76
ATG4B-213ENST00000460211 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.81■□□□□ 0.76
ATG4B-213ENST00000460211 LINC00116Q8NCU8 138 aa19.81■□□□□ 0.76
ATG4B-213ENST00000460211 IL17REQ8NFR9 667 aa19.81■□□□□ 0.76
ATG4B-213ENST00000460211 ITPK1Q13572 414 aa19.8■□□□□ 0.76
ATG4B-213ENST00000460211 IFFO2Q5TF58 517 aa19.8■□□□□ 0.76
ATG4B-213ENST00000460211 MAPK8IP3Q9UPT6 1336 aa19.79■□□□□ 0.76
ATG4B-213ENST00000460211 HTATSF1O43719 755 aaKnown RBP19.79■□□□□ 0.76
ATG4B-213ENST00000460211 TTC5Q8N0Z6 440 aa19.79■□□□□ 0.76
ATG4B-213ENST00000460211 ADCY9O60503 1353 aa19.79■□□□□ 0.76
ATG4B-213ENST00000460211 SCN11AQ9UI33 1791 aa19.78■□□□□ 0.76
ATG4B-213ENST00000460211 WDR43Q15061 677 aaKnown RBP eCLIP19.78■□□□□ 0.76
ATG4B-213ENST00000460211 GNPATO15228 680 aa19.77■□□□□ 0.76
ATG4B-213ENST00000460211 SSFA2P28290 1259 aa19.77■□□□□ 0.76
ATG4B-213ENST00000460211 SLC39A6Q13433 755 aa19.77■□□□□ 0.76
ATG4B-213ENST00000460211 RC3H1Q5TC82 1133 aaKnown RBP19.77■□□□□ 0.76
ATG4B-213ENST00000460211 SLC4A9Q96Q91 983 aa19.77■□□□□ 0.76
ATG4B-213ENST00000460211 MRC1P22897 1456 aa19.76■□□□□ 0.75
ATG4B-213ENST00000460211 PLEKHF1Q96S99 279 aa19.76■□□□□ 0.75
ATG4B-213ENST00000460211 RTCBQ9Y3I0 505 aaKnown RBP19.76■□□□□ 0.75
ATG4B-213ENST00000460211 CNTNAP4Q9C0A0 1308 aa19.75■□□□□ 0.75
ATG4B-213ENST00000460211 CEMIPQ8WUJ3 1361 aa19.74■□□□□ 0.75
ATG4B-213ENST00000460211 HSPA6P17066 643 aa19.74■□□□□ 0.75
ATG4B-213ENST00000460211 NFE2L2Q16236 605 aa19.74■□□□□ 0.75
ATG4B-213ENST00000460211 BTBD11A6QL63 1104 aa19.73■□□□□ 0.75
ATG4B-213ENST00000460211 ANP32CO43423 234 aa19.73■□□□□ 0.75
ATG4B-213ENST00000460211 TRAPPC3LQ5T215 181 aa19.73■□□□□ 0.75
ATG4B-213ENST00000460211 ZNF790Q6PG37 636 aa19.73■□□□□ 0.75
ATG4B-213ENST00000460211 MCM10Q7L590 875 aa19.73■□□□□ 0.75
ATG4B-213ENST00000460211 VSIG10Q8N0Z9 540 aa19.73■□□□□ 0.75
ATG4B-213ENST00000460211 ADAMTS7Q9UKP4 1686 aa19.71■□□□□ 0.75
ATG4B-213ENST00000460211 RPS6KA4O75676 772 aa19.71■□□□□ 0.75
ATG4B-213ENST00000460211 ADRA2BP18089 450 aa19.71■□□□□ 0.75
ATG4B-213ENST00000460211 DNAJC10Q8IXB1 793 aa19.71■□□□□ 0.75
ATG4B-213ENST00000460211 N4BP2Q86UW6 1770 aaPredicted RBP19.7■□□□□ 0.74
ATG4B-213ENST00000460211 MMP10P09238 476 aa19.7■□□□□ 0.74
ATG4B-213ENST00000460211 CRKLP46109 303 aaKnown RBP19.7■□□□□ 0.74
ATG4B-213ENST00000460211 DCTN1Q14203 1278 aa19.7■□□□□ 0.74
ATG4B-213ENST00000460211 FMNL2Q96PY5 1086 aa19.7■□□□□ 0.74
ATG4B-213ENST00000460211 TEX13AQ9BXU3 409 aaPredicted RBP19.7■□□□□ 0.74
ATG4B-213ENST00000460211 ZNF831Q5JPB2 1677 aa19.7■□□□□ 0.74
ATG4B-213ENST00000460211 STARD3NLO95772 234 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms