RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 SATB1Q01826 763 aa8.45□□□□□ -1.06
CUBNP3-201ENST00000457461 RRS1Q15050 365 aaKnown RBP8.45□□□□□ -1.06
CUBNP3-201ENST00000457461 CCDC146Q8IYE0 955 aa8.45□□□□□ -1.06
CUBNP3-201ENST00000457461 MAP3K19Q56UN5 1328 aa8.45□□□□□ -1.06
CUBNP3-201ENST00000457461 CAMTA1Q9Y6Y1 1673 aa8.45□□□□□ -1.06
CUBNP3-201ENST00000457461 CCDC66A2RUB6 948 aa8.45□□□□□ -1.06
CUBNP3-201ENST00000457461 TULP2O00295 520 aa8.45□□□□□ -1.06
CUBNP3-201ENST00000457461 FCHSD2O94868 740 aa8.45□□□□□ -1.06
CUBNP3-201ENST00000457461 U2AF1L5P0DN76 240 aaPredicted RBP8.45□□□□□ -1.06
CUBNP3-201ENST00000457461 NLRP6P59044 892 aa8.45□□□□□ -1.06
CUBNP3-201ENST00000457461 U2AF1Q01081 240 aaKnown RBP eCLIP8.45□□□□□ -1.06
CUBNP3-201ENST00000457461 CASC1Q6TDU7 716 aa8.45□□□□□ -1.06
CUBNP3-201ENST00000457461 CREBRFQ8IUR6 639 aa8.45□□□□□ -1.06
CUBNP3-201ENST00000457461 TRMT2AQ8IZ69 625 aaKnown RBP8.45□□□□□ -1.06
CUBNP3-201ENST00000457461 ABCC6O95255 1503 aa8.44□□□□□ -1.06
CUBNP3-201ENST00000457461 FOXO3O43524 673 aa8.44□□□□□ -1.06
CUBNP3-201ENST00000457461 XRCC6P12956 609 aaKnown RBP eCLIP8.44□□□□□ -1.06
CUBNP3-201ENST00000457461 IRX5P78411 483 aaPredicted RBP8.44□□□□□ -1.06
CUBNP3-201ENST00000457461 PSME1Q06323 249 aa8.44□□□□□ -1.06
CUBNP3-201ENST00000457461 TCP11L2Q8N4U5 519 aa8.44□□□□□ -1.06
CUBNP3-201ENST00000457461 ABTB2Q8N961 1025 aa8.44□□□□□ -1.06
CUBNP3-201ENST00000457461 ABCA3Q99758 1704 aa8.44□□□□□ -1.06
CUBNP3-201ENST00000457461 EIF4A2Q14240 407 aaKnown RBP8.43□□□□□ -1.06
CUBNP3-201ENST00000457461 NPHP3Q7Z494 1330 aa8.43□□□□□ -1.06
CUBNP3-201ENST00000457461 RAD50Q92878 1312 aa8.43□□□□□ -1.06
CUBNP3-201ENST00000457461 ARHGEF10O15013 1369 aa8.43□□□□□ -1.06
CUBNP3-201ENST00000457461 KDRP35968 1356 aa8.43□□□□□ -1.06
CUBNP3-201ENST00000457461 TNS3Q68CZ2 1445 aa8.43□□□□□ -1.06
CUBNP3-201ENST00000457461 COL18A1P39060 1754 aa8.43□□□□□ -1.06
CUBNP3-201ENST00000457461 SENP3-EIF4A1A0A087X0R7 540 aa8.43□□□□□ -1.06
CUBNP3-201ENST00000457461 U2SURPO15042 1029 aaKnown RBP8.43□□□□□ -1.06
CUBNP3-201ENST00000457461 PDE4AP27815 886 aa8.43□□□□□ -1.06
CUBNP3-201ENST00000457461 B4GALNT3Q6L9W6 998 aa8.43□□□□□ -1.06
CUBNP3-201ENST00000457461 KRT28Q7Z3Y7 464 aa8.43□□□□□ -1.06
CUBNP3-201ENST00000457461 IFNLR1Q8IU57 520 aaPredicted RBP8.43□□□□□ -1.06
CUBNP3-201ENST00000457461 CDCA7LQ96GN5 454 aa8.43□□□□□ -1.06
CUBNP3-201ENST00000457461 SH3BP1Q9Y3L3 701 aa8.43□□□□□ -1.06
CUBNP3-201ENST00000457461 NCAPD2Q15021 1401 aa8.42□□□□□ -1.06
CUBNP3-201ENST00000457461 SSR1P43307 286 aaKnown RBP8.42□□□□□ -1.06
CUBNP3-201ENST00000457461 CACNB1Q02641 598 aaPredicted RBP8.42□□□□□ -1.06
CUBNP3-201ENST00000457461 GOLGA2Q08379 1002 aa8.42□□□□□ -1.06
CUBNP3-201ENST00000457461 SLFN5Q08AF3 891 aa8.42□□□□□ -1.06
CUBNP3-201ENST00000457461 DUSP27Q5VZP5 1158 aa8.42□□□□□ -1.06
CUBNP3-201ENST00000457461 NBPF10Q6P3W6 841 aaKnown RBP8.42□□□□□ -1.06
CUBNP3-201ENST00000457461 BRINP3Q76B58 766 aa8.42□□□□□ -1.06
CUBNP3-201ENST00000457461 KCNH5Q8NCM2 988 aa8.42□□□□□ -1.06
CUBNP3-201ENST00000457461 MYH16Q9H6N6 1097 aa8.42□□□□□ -1.06
CUBNP3-201ENST00000457461 PRDM16Q9HAZ2 1276 aa8.42□□□□□ -1.06
CUBNP3-201ENST00000457461 RGPD2P0DJD1 1756 aa8.42□□□□□ -1.06
CUBNP3-201ENST00000457461 RGPD5Q99666 1765 aa8.42□□□□□ -1.06
CUBNP3-201ENST00000457461 LMO7Q8WWI1 1683 aa8.41□□□□□ -1.06
CUBNP3-201ENST00000457461 IGSF1Q8N6C5 1336 aa8.41□□□□□ -1.06
CUBNP3-201ENST00000457461 HOXC9P31274 260 aa8.41□□□□□ -1.06
CUBNP3-201ENST00000457461 TMPOP42166 694 aaKnown RBP8.41□□□□□ -1.06
CUBNP3-201ENST00000457461 MFAP1P55081 439 aaKnown RBP8.41□□□□□ -1.06
CUBNP3-201ENST00000457461 MAP2K1Q02750 393 aaPredicted RBP8.41□□□□□ -1.06
CUBNP3-201ENST00000457461 OS9Q13438 667 aaPredicted RBP8.41□□□□□ -1.06
CUBNP3-201ENST00000457461 ZKSCAN8Q15776 578 aaPredicted RBP8.41□□□□□ -1.06
CUBNP3-201ENST00000457461 CSPP1Q1MSJ5 1256 aa8.41□□□□□ -1.06
CUBNP3-201ENST00000457461 HSP90AB2PQ58FF8 381 aa8.41□□□□□ -1.06
CUBNP3-201ENST00000457461 CERS3Q8IU89 383 aa8.41□□□□□ -1.06
CUBNP3-201ENST00000457461 WDR63Q8IWG1 891 aa8.41□□□□□ -1.06
CUBNP3-201ENST00000457461 OTUD6BQ8N6M0 293 aa8.41□□□□□ -1.06
CUBNP3-201ENST00000457461 KIF3AQ9Y496 699 aa8.41□□□□□ -1.06
CUBNP3-201ENST00000457461 SOS2Q07890 1332 aaPredicted RBP8.41□□□□□ -1.06
CUBNP3-201ENST00000457461 E9PSI1 815 aa8.4□□□□□ -1.06
CUBNP3-201ENST00000457461 LMOD3Q0VAK6 560 aa8.4□□□□□ -1.06
CUBNP3-201ENST00000457461 CEP83Q9Y592 693 aa8.4□□□□□ -1.06
CUBNP3-201ENST00000457461 FAM208AQ9UK61 1670 aaKnown RBP8.4□□□□□ -1.06
CUBNP3-201ENST00000457461 AHDC1Q5TGY3 1603 aaPredicted RBP8.4□□□□□ -1.06
CUBNP3-201ENST00000457461 SPATA31A3Q5VYP0 1347 aa8.4□□□□□ -1.07
CUBNP3-201ENST00000457461 MAPK8IP3Q9UPT6 1336 aa8.4□□□□□ -1.07
CUBNP3-201ENST00000457461 KIF1CO43896 1103 aaKnown RBP8.4□□□□□ -1.07
CUBNP3-201ENST00000457461 PRKAR2BP31323 418 aa8.4□□□□□ -1.07
CUBNP3-201ENST00000457461 GABPB1Q06547 395 aaPredicted RBP8.4□□□□□ -1.07
CUBNP3-201ENST00000457461 NUTM2GQ5VZR2 741 aa8.4□□□□□ -1.07
CUBNP3-201ENST00000457461 ARHGEF25Q86VW2 580 aa8.4□□□□□ -1.07
CUBNP3-201ENST00000457461 IP6K1Q92551 441 aa8.4□□□□□ -1.07
CUBNP3-201ENST00000457461 MYCBPQ99417 103 aaPredicted RBP8.4□□□□□ -1.07
CUBNP3-201ENST00000457461 SLAIN2Q9P270 581 aa8.4□□□□□ -1.07
CUBNP3-201ENST00000457461 ROBO1Q9Y6N7 1651 aa8.39□□□□□ -1.07
CUBNP3-201ENST00000457461 IL16Q14005 1332 aa8.39□□□□□ -1.07
CUBNP3-201ENST00000457461 GCP02774 474 aa8.39□□□□□ -1.07
CUBNP3-201ENST00000457461 MCM5P33992 734 aa8.39□□□□□ -1.07
CUBNP3-201ENST00000457461 XPCQ01831 940 aaPredicted RBP8.39□□□□□ -1.07
CUBNP3-201ENST00000457461 SETDB1Q15047 1291 aa8.39□□□□□ -1.07
CUBNP3-201ENST00000457461 ZSCAN30Q86W11 494 aa8.39□□□□□ -1.07
CUBNP3-201ENST00000457461 BANK1Q8NDB2 785 aa8.39□□□□□ -1.07
CUBNP3-201ENST00000457461 MKL1Q969V6 931 aa8.39□□□□□ -1.07
CUBNP3-201ENST00000457461 BRMS1Q9HCU9 246 aa8.39□□□□□ -1.07
CUBNP3-201ENST00000457461 TRIM35Q9UPQ4 493 aa8.39□□□□□ -1.07
CUBNP3-201ENST00000457461 LRRC37A3O60309 1634 aa8.39□□□□□ -1.07
CUBNP3-201ENST00000457461 ZNF500O60304 480 aaPredicted RBP8.38□□□□□ -1.07
CUBNP3-201ENST00000457461 AMPHP49418 695 aa8.38□□□□□ -1.07
CUBNP3-201ENST00000457461 BRPF1P55201 1214 aaPredicted RBP8.38□□□□□ -1.07
CUBNP3-201ENST00000457461 NFE2L2Q16236 605 aa8.38□□□□□ -1.07
CUBNP3-201ENST00000457461 PHACTR3Q96KR7 559 aa8.38□□□□□ -1.07
CUBNP3-201ENST00000457461 TIGD1Q96MW7 591 aa8.38□□□□□ -1.07
CUBNP3-201ENST00000457461 NCAPGQ9BPX3 1015 aa8.38□□□□□ -1.07
CUBNP3-201ENST00000457461 FAM13BQ9NYF5 915 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms