RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 SALL2Q9Y467 1007 aaPredicted RBP18.57■□□□□ 0.56
TIMP1-205ENST00000456754 ERVV-2B6SEH9 535 aa18.56■□□□□ 0.56
TIMP1-205ENST00000456754 KCNQ4P56696 695 aa18.56■□□□□ 0.56
TIMP1-205ENST00000456754 EZH2Q15910 746 aaKnown RBP18.56■□□□□ 0.56
TIMP1-205ENST00000456754 SLC39A6Q13433 755 aa18.55■□□□□ 0.56
TIMP1-205ENST00000456754 PAPPAQ13219 1627 aa18.54■□□□□ 0.56
TIMP1-205ENST00000456754 SF3B2Q13435 895 aaKnown RBP18.54■□□□□ 0.56
TIMP1-205ENST00000456754 PROM2Q8N271 834 aa18.54■□□□□ 0.56
TIMP1-205ENST00000456754 RTF1Q92541 710 aaKnown RBP18.54■□□□□ 0.56
TIMP1-205ENST00000456754 CAMKK2Q96RR4 588 aa18.54■□□□□ 0.56
TIMP1-205ENST00000456754 ATG3Q9NT62 314 aa18.54■□□□□ 0.56
TIMP1-205ENST00000456754 MIS18AQ9NYP9 233 aa18.54■□□□□ 0.56
TIMP1-205ENST00000456754 LY75O60449 1722 aa18.54■□□□□ 0.56
TIMP1-205ENST00000456754 KCNQ3O43525 872 aa18.53■□□□□ 0.56
TIMP1-205ENST00000456754 HTATSF1O43719 755 aaKnown RBP18.52■□□□□ 0.56
TIMP1-205ENST00000456754 CCDC125Q86Z20 511 aa18.52■□□□□ 0.56
TIMP1-205ENST00000456754 RREB1Q92766 1687 aa18.52■□□□□ 0.56
TIMP1-205ENST00000456754 PALLDQ8WX93 1383 aa18.52■□□□□ 0.55
TIMP1-205ENST00000456754 BAG6P46379 1132 aa18.51■□□□□ 0.55
TIMP1-205ENST00000456754 TEFQ10587 303 aa18.51■□□□□ 0.55
TIMP1-205ENST00000456754 NUP188Q5SRE5 1749 aa18.51■□□□□ 0.55
TIMP1-205ENST00000456754 RGPD3A6NKT7 1758 aaPredicted RBP18.5■□□□□ 0.55
TIMP1-205ENST00000456754 RGPD4Q7Z3J3 1758 aa18.5■□□□□ 0.55
TIMP1-205ENST00000456754 SLC4A9Q96Q91 983 aa18.5■□□□□ 0.55
TIMP1-205ENST00000456754 LRRC4BQ9NT99 713 aa18.5■□□□□ 0.55
TIMP1-205ENST00000456754 TXNRD1Q16881 649 aa18.49■□□□□ 0.55
TIMP1-205ENST00000456754 UBR2Q8IWV8 1755 aa18.49■□□□□ 0.55
TIMP1-205ENST00000456754 KCPQ6ZWJ8 1503 aa18.49■□□□□ 0.55
TIMP1-205ENST00000456754 KDM3BQ7LBC6 1761 aa18.48■□□□□ 0.55
TIMP1-205ENST00000456754 PLSCR1O15162 318 aa18.48■□□□□ 0.55
TIMP1-205ENST00000456754 PTCD1O75127 700 aaKnown RBP18.48■□□□□ 0.55
TIMP1-205ENST00000456754 BTBD11A6QL63 1104 aa18.47■□□□□ 0.55
TIMP1-205ENST00000456754 LMOD3Q0VAK6 560 aa18.46■□□□□ 0.55
TIMP1-205ENST00000456754 WWC1Q8IX03 1113 aa18.46■□□□□ 0.55
TIMP1-205ENST00000456754 RBM42Q9BTD8 480 aaKnown RBP18.46■□□□□ 0.55
TIMP1-205ENST00000456754 LAS1LQ9Y4W2 734 aaKnown RBP18.46■□□□□ 0.55
TIMP1-205ENST00000456754 TAF1LQ8IZX4 1826 aa18.46■□□□□ 0.55
TIMP1-205ENST00000456754 TJP1Q07157 1748 aa18.46■□□□□ 0.55
TIMP1-205ENST00000456754 ITPK1Q13572 414 aa18.45■□□□□ 0.54
TIMP1-205ENST00000456754 TAF7Q15545 349 aaPredicted RBP18.45■□□□□ 0.54
TIMP1-205ENST00000456754 CCNL1Q9UK58 526 aaPredicted RBP18.45■□□□□ 0.54
TIMP1-205ENST00000456754 C5P01031 1676 aa18.44■□□□□ 0.54
TIMP1-205ENST00000456754 LOC102724428A0A0B4J2F2 783 aa18.44■□□□□ 0.54
TIMP1-205ENST00000456754 SIK1P57059 783 aa18.44■□□□□ 0.54
TIMP1-205ENST00000456754 ZNF790Q6PG37 636 aa18.44■□□□□ 0.54
TIMP1-205ENST00000456754 SMARCC1Q92922 1105 aaPredicted RBP18.44■□□□□ 0.54
TIMP1-205ENST00000456754 ZNF496Q96IT1 587 aaPredicted RBP18.44■□□□□ 0.54
TIMP1-205ENST00000456754 ANO8Q9HCE9 1232 aaPredicted RBP18.44■□□□□ 0.54
TIMP1-205ENST00000456754 PRAMEF22A3QJZ6 481 aa18.43■□□□□ 0.54
TIMP1-205ENST00000456754 SPINK5Q9NQ38 1064 aaPredicted RBP18.43■□□□□ 0.54
TIMP1-205ENST00000456754 CCDC27Q2M243 656 aa18.42■□□□□ 0.54
TIMP1-205ENST00000456754 LINC00116Q8NCU8 138 aa18.42■□□□□ 0.54
TIMP1-205ENST00000456754 COL5A3P25940 1745 aaPredicted RBP18.41■□□□□ 0.54
TIMP1-205ENST00000456754 ATP6V1AP38606 617 aa18.41■□□□□ 0.54
TIMP1-205ENST00000456754 KRT24Q2M2I5 525 aa18.41■□□□□ 0.54
TIMP1-205ENST00000456754 SMIM5Q71RC9 77 aa18.41■□□□□ 0.54
TIMP1-205ENST00000456754 TSPYL4Q9UJ04 414 aa18.41■□□□□ 0.54
TIMP1-205ENST00000456754 TUBGCP6Q96RT7 1819 aa18.4■□□□□ 0.54
TIMP1-205ENST00000456754 ZNF827Q17R98 1081 aa18.4■□□□□ 0.54
TIMP1-205ENST00000456754 DNAJC10Q8IXB1 793 aa18.4■□□□□ 0.54
TIMP1-205ENST00000456754 TTC5Q8N0Z6 440 aa18.4■□□□□ 0.54
TIMP1-205ENST00000456754 MYH14Q7Z406 1995 aaKnown RBP18.4■□□□□ 0.54
TIMP1-205ENST00000456754 ZNF521Q96K83 1311 aa18.4■□□□□ 0.54
TIMP1-205ENST00000456754 CHL1O00533 1208 aa18.39■□□□□ 0.53
TIMP1-205ENST00000456754 ZNF853P0CG23 659 aa18.39■□□□□ 0.53
TIMP1-205ENST00000456754 AMIGO3Q86WK7 504 aa18.39■□□□□ 0.53
TIMP1-205ENST00000456754 TSR2Q969E8 191 aaKnown RBP18.39■□□□□ 0.53
TIMP1-205ENST00000456754 MBIPQ9NS73 344 aa18.39■□□□□ 0.53
TIMP1-205ENST00000456754 ZNF831Q5JPB2 1677 aa18.38■□□□□ 0.53
TIMP1-205ENST00000456754 C4BP0C0L5 1744 aa18.38■□□□□ 0.53
TIMP1-205ENST00000456754 EIF4A1P60842 406 aaKnown RBP18.38■□□□□ 0.53
TIMP1-205ENST00000456754 SLC27A3Q5K4L6 730 aa18.38■□□□□ 0.53
TIMP1-205ENST00000456754 HEG1Q9ULI3 1381 aa18.38■□□□□ 0.53
TIMP1-205ENST00000456754 HNRNPUQ00839 825 aaKnown RBP eCLIP18.37■□□□□ 0.53
TIMP1-205ENST00000456754 CFAP44Q96MT7 982 aa18.37■□□□□ 0.53
TIMP1-205ENST00000456754 CICQ96RK0 1608 aaPredicted RBP18.37■□□□□ 0.53
TIMP1-205ENST00000456754 FMNL2Q96PY5 1086 aa18.36■□□□□ 0.53
TIMP1-205ENST00000456754 IFT57Q9NWB7 429 aa18.36■□□□□ 0.53
TIMP1-205ENST00000456754 PSDA5PKW4 1024 aaPredicted RBP18.35■□□□□ 0.53
TIMP1-205ENST00000456754 PIP4K2AP48426 406 aaPredicted RBP18.35■□□□□ 0.53
TIMP1-205ENST00000456754 NCBP3Q53F19 620 aaKnown RBP18.35■□□□□ 0.53
TIMP1-205ENST00000456754 AKT1S1Q96B36 256 aa18.35■□□□□ 0.53
TIMP1-205ENST00000456754 CDCA7LQ96GN5 454 aa18.35■□□□□ 0.53
TIMP1-205ENST00000456754 PDGFDQ9GZP0 370 aaPredicted RBP18.35■□□□□ 0.53
TIMP1-205ENST00000456754 USP16Q9Y5T5 823 aa18.35■□□□□ 0.53
TIMP1-205ENST00000456754 UBR3Q6ZT12 1888 aa18.33■□□□□ 0.53
TIMP1-205ENST00000456754 LAMB4A4D0S4 1761 aa18.33■□□□□ 0.53
TIMP1-205ENST00000456754 CYP19A1P11511 503 aaPredicted RBP18.33■□□□□ 0.52
TIMP1-205ENST00000456754 GNAI1P63096 354 aa18.33■□□□□ 0.52
TIMP1-205ENST00000456754 R3HDM1Q15032 1099 aaKnown RBP18.33■□□□□ 0.52
TIMP1-205ENST00000456754 WDR63Q8IWG1 891 aa18.33■□□□□ 0.52
TIMP1-205ENST00000456754 FANCIQ9NVI1 1328 aa18.32■□□□□ 0.52
TIMP1-205ENST00000456754 GIGYF1O75420 1035 aaPredicted RBP18.32■□□□□ 0.52
TIMP1-205ENST00000456754 CRKLP46109 303 aaKnown RBP18.32■□□□□ 0.52
TIMP1-205ENST00000456754 INTS5Q6P9B9 1019 aaKnown RBP18.32■□□□□ 0.52
TIMP1-205ENST00000456754 IL16Q14005 1332 aa18.31■□□□□ 0.52
TIMP1-205ENST00000456754 ELL2O00472 640 aaPredicted RBP18.31■□□□□ 0.52
TIMP1-205ENST00000456754 A1BGP04217 495 aa18.31■□□□□ 0.52
TIMP1-205ENST00000456754 CALD1Q05682 793 aaKnown RBP18.31■□□□□ 0.52
TIMP1-205ENST00000456754 SLC15A2Q16348 729 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms