RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 RBM42Q9BTD8 480 aaKnown RBP13.74□□□□□ -0.21
TOP3B-212ENST00000456075 SLC52A2Q9HAB3 445 aa13.74□□□□□ -0.21
TOP3B-212ENST00000456075 ATG3Q9NT62 314 aa13.74□□□□□ -0.21
TOP3B-212ENST00000456075 MSH5O43196 834 aa13.73□□□□□ -0.21
TOP3B-212ENST00000456075 ATP6V1AP38606 617 aa13.73□□□□□ -0.21
TOP3B-212ENST00000456075 PHACTR3Q96KR7 559 aa13.73□□□□□ -0.21
TOP3B-212ENST00000456075 AK7Q96M32 723 aa13.73□□□□□ -0.21
TOP3B-212ENST00000456075 LGR6Q9HBX8 967 aa13.73□□□□□ -0.21
TOP3B-212ENST00000456075 SPON1Q9HCB6 807 aa13.73□□□□□ -0.21
TOP3B-212ENST00000456075 AKT1S1Q96B36 256 aa13.72□□□□□ -0.21
TOP3B-212ENST00000456075 PPP1R1BQ9UD71 204 aaPredicted RBP13.72□□□□□ -0.21
TOP3B-212ENST00000456075 PAPPAQ13219 1627 aa13.72□□□□□ -0.21
TOP3B-212ENST00000456075 ANP32CO43423 234 aa13.71□□□□□ -0.21
TOP3B-212ENST00000456075 PTCD1O75127 700 aaKnown RBP13.71□□□□□ -0.21
TOP3B-212ENST00000456075 ZBTB7AO95365 584 aa13.71□□□□□ -0.21
TOP3B-212ENST00000456075 TTC5Q8N0Z6 440 aa13.71□□□□□ -0.21
TOP3B-212ENST00000456075 SCN11AQ9UI33 1791 aa13.71□□□□□ -0.22
TOP3B-212ENST00000456075 C5P01031 1676 aa13.69□□□□□ -0.22
TOP3B-212ENST00000456075 FLAD1Q8NFF5 587 aa13.69□□□□□ -0.22
TOP3B-212ENST00000456075 LRP5O75197 1615 aa13.68□□□□□ -0.22
TOP3B-212ENST00000456075 MRC1P22897 1456 aa13.68□□□□□ -0.22
TOP3B-212ENST00000456075 IL17REQ8NFR9 667 aa13.68□□□□□ -0.22
TOP3B-212ENST00000456075 PDGFDQ9GZP0 370 aaPredicted RBP13.68□□□□□ -0.22
TOP3B-212ENST00000456075 MTFR1LQ9H019 292 aa13.68□□□□□ -0.22
TOP3B-212ENST00000456075 ATF5Q9Y2D1 282 aaPredicted RBP13.68□□□□□ -0.22
TOP3B-212ENST00000456075 PNPLA7Q6ZV29 1317 aa13.67□□□□□ -0.22
TOP3B-212ENST00000456075 GNPATO15228 680 aa13.67□□□□□ -0.22
TOP3B-212ENST00000456075 HTATSF1O43719 755 aaKnown RBP13.67□□□□□ -0.22
TOP3B-212ENST00000456075 PHF14O94880 888 aa13.67□□□□□ -0.22
TOP3B-212ENST00000456075 SLC39A6Q13433 755 aa13.67□□□□□ -0.22
TOP3B-212ENST00000456075 ITPK1Q13572 414 aa13.67□□□□□ -0.22
TOP3B-212ENST00000456075 LINC00116Q8NCU8 138 aa13.67□□□□□ -0.22
TOP3B-212ENST00000456075 SLC16A10Q8TF71 515 aa13.67□□□□□ -0.22
TOP3B-212ENST00000456075 NFE2L2Q16236 605 aa13.66□□□□□ -0.22
TOP3B-212ENST00000456075 MCM10Q7L590 875 aa13.66□□□□□ -0.22
TOP3B-212ENST00000456075 PLEKHF1Q96S99 279 aa13.66□□□□□ -0.22
TOP3B-212ENST00000456075 C4BP0C0L5 1744 aa13.66□□□□□ -0.22
TOP3B-212ENST00000456075 CASZ1Q86V15 1759 aa13.66□□□□□ -0.22
TOP3B-212ENST00000456075 BTBD11A6QL63 1104 aa13.65□□□□□ -0.22
TOP3B-212ENST00000456075 POLD1P28340 1107 aa13.65□□□□□ -0.22
TOP3B-212ENST00000456075 RTCBQ9Y3I0 505 aaKnown RBP13.65□□□□□ -0.22
TOP3B-212ENST00000456075 CEMIPQ8WUJ3 1361 aa13.65□□□□□ -0.22
TOP3B-212ENST00000456075 ADAMTS7Q9UKP4 1686 aa13.65□□□□□ -0.22
TOP3B-212ENST00000456075 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.64□□□□□ -0.23
TOP3B-212ENST00000456075 SSFA2P28290 1259 aa13.64□□□□□ -0.23
TOP3B-212ENST00000456075 LMOD3Q0VAK6 560 aa13.64□□□□□ -0.23
TOP3B-212ENST00000456075 DCTN1Q14203 1278 aa13.64□□□□□ -0.23
TOP3B-212ENST00000456075 ZNF790Q6PG37 636 aa13.64□□□□□ -0.23
TOP3B-212ENST00000456075 COL23A1Q86Y22 540 aaPredicted RBP13.64□□□□□ -0.23
TOP3B-212ENST00000456075 CCDC146Q8IYE0 955 aa13.64□□□□□ -0.23
TOP3B-212ENST00000456075 SLC4A9Q96Q91 983 aa13.64□□□□□ -0.23
TOP3B-212ENST00000456075 TAF1LQ8IZX4 1826 aa13.64□□□□□ -0.23
TOP3B-212ENST00000456075 VIRMAQ69YN4 1812 aaKnown RBP13.63□□□□□ -0.23
TOP3B-212ENST00000456075 RIPK4P57078 832 aa13.63□□□□□ -0.23
TOP3B-212ENST00000456075 RC3H1Q5TC82 1133 aaKnown RBP13.63□□□□□ -0.23
TOP3B-212ENST00000456075 RUNDC1Q96C34 613 aa13.63□□□□□ -0.23
TOP3B-212ENST00000456075 ADAMTS8Q9UP79 889 aa13.63□□□□□ -0.23
TOP3B-212ENST00000456075 QSER1Q2KHR3 1735 aa13.63□□□□□ -0.23
TOP3B-212ENST00000456075 CNTNAP4Q9C0A0 1308 aa13.63□□□□□ -0.23
TOP3B-212ENST00000456075 ZNF831Q5JPB2 1677 aa13.63□□□□□ -0.23
TOP3B-212ENST00000456075 STARD3NLO95772 234 aa13.62□□□□□ -0.23
TOP3B-212ENST00000456075 CRKLP46109 303 aaKnown RBP13.62□□□□□ -0.23
TOP3B-212ENST00000456075 NEUROD2Q15784 382 aa13.62□□□□□ -0.23
TOP3B-212ENST00000456075 TRAPPC3LQ5T215 181 aa13.62□□□□□ -0.23
TOP3B-212ENST00000456075 VSIG10Q8N0Z9 540 aa13.62□□□□□ -0.23
TOP3B-212ENST00000456075 FMNL2Q96PY5 1086 aa13.62□□□□□ -0.23
TOP3B-212ENST00000456075 MRS2Q9HD23 443 aa13.62□□□□□ -0.23
TOP3B-212ENST00000456075 ADRA2BP18089 450 aa13.61□□□□□ -0.23
TOP3B-212ENST00000456075 TAF7Q15545 349 aaPredicted RBP13.61□□□□□ -0.23
TOP3B-212ENST00000456075 MSL1Q68DK7 614 aa13.61□□□□□ -0.23
TOP3B-212ENST00000456075 DNAJC10Q8IXB1 793 aa13.61□□□□□ -0.23
TOP3B-212ENST00000456075 PNISRQ8TF01 805 aaKnown RBP13.61□□□□□ -0.23
TOP3B-212ENST00000456075 TEX13AQ9BXU3 409 aaPredicted RBP13.61□□□□□ -0.23
TOP3B-212ENST00000456075 TUBGCP6Q96RT7 1819 aa13.61□□□□□ -0.23
TOP3B-212ENST00000456075 RPS6KA4O75676 772 aa13.6□□□□□ -0.23
TOP3B-212ENST00000456075 RFC4P35249 363 aa13.6□□□□□ -0.23
TOP3B-212ENST00000456075 TMPOP42166 694 aaKnown RBP13.6□□□□□ -0.23
TOP3B-212ENST00000456075 PTGER2P43116 358 aa13.6□□□□□ -0.23
TOP3B-212ENST00000456075 NPM2Q86SE8 214 aaKnown RBP13.6□□□□□ -0.23
TOP3B-212ENST00000456075 KLHL34Q8N239 644 aa13.6□□□□□ -0.23
TOP3B-212ENST00000456075 ZNF496Q96IT1 587 aaPredicted RBP13.6□□□□□ -0.23
TOP3B-212ENST00000456075 ARXQ96QS3 562 aa13.6□□□□□ -0.23
TOP3B-212ENST00000456075 CCDC87Q9NVE4 849 aa13.6□□□□□ -0.23
TOP3B-212ENST00000456075 RRP7AQ9Y3A4 280 aaKnown RBP13.6□□□□□ -0.23
TOP3B-212ENST00000456075 KCPQ6ZWJ8 1503 aa13.59□□□□□ -0.23
TOP3B-212ENST00000456075 HEG1Q9ULI3 1381 aa13.59□□□□□ -0.23
TOP3B-212ENST00000456075 SMIM5Q71RC9 77 aa13.59□□□□□ -0.23
TOP3B-212ENST00000456075 THUMPD2Q9BTF0 503 aaKnown RBP13.59□□□□□ -0.23
TOP3B-212ENST00000456075 DCAF8L1A6NGE4 600 aa13.58□□□□□ -0.24
TOP3B-212ENST00000456075 CYP19A1P11511 503 aaPredicted RBP13.58□□□□□ -0.24
TOP3B-212ENST00000456075 AMIGO3Q86WK7 504 aa13.58□□□□□ -0.24
TOP3B-212ENST00000456075 COL5A3P25940 1745 aaPredicted RBP13.58□□□□□ -0.24
TOP3B-212ENST00000456075 SIPA1L3O60292 1781 aaPredicted RBP13.58□□□□□ -0.24
TOP3B-212ENST00000456075 UBR3Q6ZT12 1888 aa13.57□□□□□ -0.24
TOP3B-212ENST00000456075 TJP1Q07157 1748 aa13.57□□□□□ -0.24
TOP3B-212ENST00000456075 KCNQ3O43525 872 aa13.57□□□□□ -0.24
TOP3B-212ENST00000456075 ARHGEF1Q92888 912 aaKnown RBP13.57□□□□□ -0.24
TOP3B-212ENST00000456075 MIS18AQ9NYP9 233 aa13.57□□□□□ -0.24
TOP3B-212ENST00000456075 UBR2Q8IWV8 1755 aa13.56□□□□□ -0.24
TOP3B-212ENST00000456075 SNRPA1P09661 255 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms