RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 MSH5O43196 834 aa33.29■■■□□ 2.92
MSH2-203ENST00000454849 ATP6V1AP38606 617 aa33.29■■■□□ 2.92
MSH2-203ENST00000454849 ITPK1Q13572 414 aa33.29■■■□□ 2.92
MSH2-203ENST00000454849 LINC00116Q8NCU8 138 aa33.28■■■□□ 2.92
MSH2-203ENST00000454849 SLC4A9Q96Q91 983 aa33.26■■■□□ 2.91
MSH2-203ENST00000454849 PTCD1O75127 700 aaKnown RBP33.25■■■□□ 2.91
MSH2-203ENST00000454849 PTGER2P43116 358 aa33.25■■■□□ 2.91
MSH2-203ENST00000454849 MTFR1LQ9H019 292 aa33.25■■■□□ 2.91
MSH2-203ENST00000454849 C5P01031 1676 aa33.24■■■□□ 2.91
MSH2-203ENST00000454849 AMIGO3Q86WK7 504 aa33.24■■■□□ 2.91
MSH2-203ENST00000454849 COL23A1Q86Y22 540 aaPredicted RBP33.24■■■□□ 2.91
MSH2-203ENST00000454849 TUBGCP6Q96RT7 1819 aa33.23■■■□□ 2.91
MSH2-203ENST00000454849 RALBP1Q15311 655 aa33.23■■■□□ 2.91
MSH2-203ENST00000454849 AK7Q96M32 723 aa33.23■■■□□ 2.91
MSH2-203ENST00000454849 SLC52A2Q9HAB3 445 aa33.23■■■□□ 2.91
MSH2-203ENST00000454849 PHF14O94880 888 aa33.21■■■□□ 2.91
MSH2-203ENST00000454849 SLC39A6Q13433 755 aa33.21■■■□□ 2.91
MSH2-203ENST00000454849 GAS2L2Q8NHY3 880 aa33.21■■■□□ 2.91
MSH2-203ENST00000454849 SCN11AQ9UI33 1791 aa33.21■■■□□ 2.91
MSH2-203ENST00000454849 TAF1LQ8IZX4 1826 aa33.21■■■□□ 2.91
MSH2-203ENST00000454849 GNAT3A8MTJ3 354 aa33.19■■■□□ 2.9
MSH2-203ENST00000454849 FCHSD2O94868 740 aa33.18■■■□□ 2.9
MSH2-203ENST00000454849 IL17REQ8NFR9 667 aa33.18■■■□□ 2.9
MSH2-203ENST00000454849 C4BP0C0L5 1744 aa33.18■■■□□ 2.9
MSH2-203ENST00000454849 MAP3K5Q99683 1374 aa33.18■■■□□ 2.9
MSH2-203ENST00000454849 MSL1Q68DK7 614 aa33.17■■■□□ 2.9
MSH2-203ENST00000454849 SGIP1Q9BQI5 828 aa33.16■■■□□ 2.9
MSH2-203ENST00000454849 GNPATO15228 680 aa33.15■■■□□ 2.9
MSH2-203ENST00000454849 SLC16A10Q8TF71 515 aa33.13■■■□□ 2.89
MSH2-203ENST00000454849 QSER1Q2KHR3 1735 aa33.12■■■□□ 2.89
MSH2-203ENST00000454849 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.12■■■□□ 2.89
MSH2-203ENST00000454849 MYBBP1AQ9BQG0 1328 aaKnown RBP33.11■■■□□ 2.89
MSH2-203ENST00000454849 HMGB2P26583 209 aaKnown RBP33.1■■■□□ 2.89
MSH2-203ENST00000454849 TEFQ10587 303 aa33.1■■■□□ 2.89
MSH2-203ENST00000454849 VIRMAQ69YN4 1812 aaKnown RBP33.09■■■□□ 2.89
MSH2-203ENST00000454849 ZNF316A6NFI3 1004 aaPredicted RBP33.09■■■□□ 2.89
MSH2-203ENST00000454849 MCM10Q7L590 875 aa33.09■■■□□ 2.89
MSH2-203ENST00000454849 ARXQ96QS3 562 aa33.09■■■□□ 2.89
MSH2-203ENST00000454849 MRC1P22897 1456 aa33.08■■■□□ 2.89
MSH2-203ENST00000454849 DCTN1Q14203 1278 aa33.08■■■□□ 2.89
MSH2-203ENST00000454849 FLAD1Q8NFF5 587 aa33.08■■■□□ 2.89
MSH2-203ENST00000454849 FHDC1Q9C0D6 1143 aaPredicted RBP33.07■■■□□ 2.88
MSH2-203ENST00000454849 DNAJC10Q8IXB1 793 aa33.06■■■□□ 2.88
MSH2-203ENST00000454849 KLHL34Q8N239 644 aa33.06■■■□□ 2.88
MSH2-203ENST00000454849 PRKRIP1Q9H875 184 aaPredicted RBP33.06■■■□□ 2.88
MSH2-203ENST00000454849 ADAMTS7Q9UKP4 1686 aa33.06■■■□□ 2.88
MSH2-203ENST00000454849 POLD1P28340 1107 aa33.05■■■□□ 2.88
MSH2-203ENST00000454849 UBR3Q6ZT12 1888 aa33.04■■■□□ 2.88
MSH2-203ENST00000454849 RTF1Q92541 710 aaKnown RBP33.04■■■□□ 2.88
MSH2-203ENST00000454849 PLEKHF1Q96S99 279 aa33.04■■■□□ 2.88
MSH2-203ENST00000454849 SSFA2P28290 1259 aa33.03■■■□□ 2.88
MSH2-203ENST00000454849 CRKLP46109 303 aaKnown RBP33.03■■■□□ 2.88
MSH2-203ENST00000454849 RTCBQ9Y3I0 505 aaKnown RBP33.03■■■□□ 2.88
MSH2-203ENST00000454849 NEFMP07197 916 aa33.02■■■□□ 2.88
MSH2-203ENST00000454849 KCNQ3O43525 872 aa33.01■■■□□ 2.87
MSH2-203ENST00000454849 RC3H1Q5TC82 1133 aaKnown RBP33.01■■■□□ 2.87
MSH2-203ENST00000454849 TTC5Q8N0Z6 440 aa33.01■■■□□ 2.87
MSH2-203ENST00000454849 CNTNAP4Q9C0A0 1308 aa33.01■■■□□ 2.87
MSH2-203ENST00000454849 SYT17Q9BSW7 474 aa33■■■□□ 2.87
MSH2-203ENST00000454849 CEMIPQ8WUJ3 1361 aa32.99■■■□□ 2.87
MSH2-203ENST00000454849 TRAPPC3LQ5T215 181 aa32.99■■■□□ 2.87
MSH2-203ENST00000454849 KCPQ6ZWJ8 1503 aa32.98■■■□□ 2.87
MSH2-203ENST00000454849 ARHGEF1Q92888 912 aaKnown RBP32.98■■■□□ 2.87
MSH2-203ENST00000454849 ZNF496Q96IT1 587 aaPredicted RBP32.98■■■□□ 2.87
MSH2-203ENST00000454849 BTBD11A6QL63 1104 aa32.97■■■□□ 2.87
MSH2-203ENST00000454849 RPS6KA4O75676 772 aa32.97■■■□□ 2.87
MSH2-203ENST00000454849 INTS5Q6P9B9 1019 aaKnown RBP32.97■■■□□ 2.87
MSH2-203ENST00000454849 ZNF790Q6PG37 636 aa32.97■■■□□ 2.87
MSH2-203ENST00000454849 MYH14Q7Z406 1995 aaKnown RBP32.97■■■□□ 2.87
MSH2-203ENST00000454849 ZNF831Q5JPB2 1677 aa32.97■■■□□ 2.87
MSH2-203ENST00000454849 COL5A3P25940 1745 aaPredicted RBP32.97■■■□□ 2.87
MSH2-203ENST00000454849 TJP1Q07157 1748 aa32.97■■■□□ 2.87
MSH2-203ENST00000454849 CCDC146Q8IYE0 955 aa32.96■■■□□ 2.87
MSH2-203ENST00000454849 MAPK8IP3Q9UPT6 1336 aa32.96■■■□□ 2.87
MSH2-203ENST00000454849 NFE2L2Q16236 605 aa32.95■■■□□ 2.87
MSH2-203ENST00000454849 THUMPD2Q9BTF0 503 aaKnown RBP32.95■■■□□ 2.87
MSH2-203ENST00000454849 CYP19A1P11511 503 aaPredicted RBP32.94■■■□□ 2.86
MSH2-203ENST00000454849 PNNQ9H307 717 aaKnown RBP32.93■■■□□ 2.86
MSH2-203ENST00000454849 CCDC87Q9NVE4 849 aa32.93■■■□□ 2.86
MSH2-203ENST00000454849 MIS18AQ9NYP9 233 aa32.93■■■□□ 2.86
MSH2-203ENST00000454849 HTATSF1O43719 755 aaKnown RBP32.91■■■□□ 2.86
MSH2-203ENST00000454849 RFC4P35249 363 aa32.91■■■□□ 2.86
MSH2-203ENST00000454849 WDR43Q15061 677 aaKnown RBP eCLIP32.91■■■□□ 2.86
MSH2-203ENST00000454849 SIPA1L3O60292 1781 aaPredicted RBP32.91■■■□□ 2.86
MSH2-203ENST00000454849 SRP68Q9UHB9 627 aaKnown RBP32.9■■■□□ 2.86
MSH2-203ENST00000454849 COL24A1Q17RW2 1714 aa32.9■■■□□ 2.86
MSH2-203ENST00000454849 ADAMTS8Q9UP79 889 aa32.89■■■□□ 2.86
MSH2-203ENST00000454849 RRP7AQ9Y3A4 280 aaKnown RBP32.89■■■□□ 2.86
MSH2-203ENST00000454849 VSIG10Q8N0Z9 540 aa32.88■■■□□ 2.85
MSH2-203ENST00000454849 NLGN2Q8NFZ4 835 aa32.88■■■□□ 2.85
MSH2-203ENST00000454849 ZBTB1Q9Y2K1 713 aa32.88■■■□□ 2.85
MSH2-203ENST00000454849 HEG1Q9ULI3 1381 aa32.87■■■□□ 2.85
MSH2-203ENST00000454849 ADRA2BP18089 450 aa32.87■■■□□ 2.85
MSH2-203ENST00000454849 CANXP27824 592 aaKnown RBP32.87■■■□□ 2.85
MSH2-203ENST00000454849 FMNL2Q96PY5 1086 aa32.87■■■□□ 2.85
MSH2-203ENST00000454849 UBR2Q8IWV8 1755 aa32.86■■■□□ 2.85
MSH2-203ENST00000454849 RIPK4P57078 832 aa32.86■■■□□ 2.85
MSH2-203ENST00000454849 TAF7Q15545 349 aaPredicted RBP32.86■■■□□ 2.85
MSH2-203ENST00000454849 NEUROD2Q15784 382 aa32.86■■■□□ 2.85
MSH2-203ENST00000454849 DLG5Q8TDM6 1919 aa32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms