RNA–Protein interactions for RNA: ENST00000454040.5

PCGEM1-201, PCGEM1, prostate-specific transcript, humanhuman

TSL 1 (best) BASIC

Gene PCGEM1, Length 1,590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGEM1-201ENST00000454040 PPM1GO15355 546 aaPredicted RBP7.82□□□□□ -1.16
PCGEM1-201ENST00000454040 DOC2BQ14184 412 aa7.82□□□□□ -1.16
PCGEM1-201ENST00000454040 MAP10Q9P2G4 905 aa7.82□□□□□ -1.16
PCGEM1-201ENST00000454040 IVNS1ABPQ9Y6Y0 642 aa7.82□□□□□ -1.16
PCGEM1-201ENST00000454040 PIK3R2O00459 728 aa7.81□□□□□ -1.16
PCGEM1-201ENST00000454040 TTLL12Q14166 644 aaPredicted RBP7.81□□□□□ -1.16
PCGEM1-201ENST00000454040 FOXD4L6Q3SYB3 417 aaPredicted RBP7.81□□□□□ -1.16
PCGEM1-201ENST00000454040 FOXD4L3Q6VB84 417 aaPredicted RBP7.81□□□□□ -1.16
PCGEM1-201ENST00000454040 SND1Q7KZF4 910 aaKnown RBP eCLIP7.81□□□□□ -1.16
PCGEM1-201ENST00000454040 AGBL1Q96MI9 1066 aa7.81□□□□□ -1.16
PCGEM1-201ENST00000454040 FAM217BQ9NTX9 383 aaPredicted RBP7.81□□□□□ -1.16
PCGEM1-201ENST00000454040 SOGA1O94964 1423 aa7.81□□□□□ -1.16
PCGEM1-201ENST00000454040 RELBQ01201 579 aa7.8□□□□□ -1.16
PCGEM1-201ENST00000454040 GIGYF2Q6Y7W6 1299 aaKnown RBP7.8□□□□□ -1.16
PCGEM1-201ENST00000454040 TRERF1Q96PN7 1200 aa7.8□□□□□ -1.16
PCGEM1-201ENST00000454040 NCAPD3P42695 1498 aa7.8□□□□□ -1.16
PCGEM1-201ENST00000454040 CEP164Q9UPV0 1460 aa7.8□□□□□ -1.16
PCGEM1-201ENST00000454040 CEP162Q5TB80 1403 aa7.8□□□□□ -1.16
PCGEM1-201ENST00000454040 BIVM-ERCC5R4GMW8 1640 aa7.8□□□□□ -1.16
PCGEM1-201ENST00000454040 MX2P20592 715 aa7.8□□□□□ -1.16
PCGEM1-201ENST00000454040 RRAGCQ9HB90 399 aa7.8□□□□□ -1.16
PCGEM1-201ENST00000454040 TOP2BQ02880 1626 aa7.79□□□□□ -1.16
PCGEM1-201ENST00000454040 SYNJ1O43426 1573 aa7.79□□□□□ -1.16
PCGEM1-201ENST00000454040 LYSMD3Q7Z3D4 306 aa7.79□□□□□ -1.16
PCGEM1-201ENST00000454040 PPARGC1BQ86YN6 1023 aaKnown RBP7.79□□□□□ -1.16
PCGEM1-201ENST00000454040 PROCA1Q8NCQ7 364 aaPredicted RBP7.79□□□□□ -1.16
PCGEM1-201ENST00000454040 ARMC2Q8NEN0 867 aa7.79□□□□□ -1.16
PCGEM1-201ENST00000454040 OXCT2Q9BYC2 517 aaPredicted RBP7.79□□□□□ -1.16
PCGEM1-201ENST00000454040 GPCPD1Q9NPB8 672 aa7.79□□□□□ -1.16
PCGEM1-201ENST00000454040 COBLO75128 1261 aa7.78□□□□□ -1.16
PCGEM1-201ENST00000454040 CHRNA4P43681 627 aa7.78□□□□□ -1.16
PCGEM1-201ENST00000454040 MAP2K3P46734 347 aa7.78□□□□□ -1.16
PCGEM1-201ENST00000454040 PRPF38BQ5VTL8 546 aaKnown RBP7.78□□□□□ -1.16
PCGEM1-201ENST00000454040 CWC22Q9HCG8 908 aaKnown RBP7.78□□□□□ -1.16
PCGEM1-201ENST00000454040 KIAA1522Q9P206 1035 aaPredicted RBP7.78□□□□□ -1.16
PCGEM1-201ENST00000454040 PRDM2Q13029 1718 aa7.78□□□□□ -1.16
PCGEM1-201ENST00000454040 SHISA8B8ZZ34 492 aa7.77□□□□□ -1.17
PCGEM1-201ENST00000454040 NEFLP07196 543 aa7.77□□□□□ -1.17
PCGEM1-201ENST00000454040 CLCN1P35523 988 aa7.77□□□□□ -1.17
PCGEM1-201ENST00000454040 DHX9Q08211 1270 aaKnown RBP7.77□□□□□ -1.17
PCGEM1-201ENST00000454040 DBN1Q16643 649 aa7.77□□□□□ -1.17
PCGEM1-201ENST00000454040 SUV39H2Q9H5I1 410 aa7.77□□□□□ -1.17
PCGEM1-201ENST00000454040 SNRKQ9NRH2 765 aa7.77□□□□□ -1.17
PCGEM1-201ENST00000454040 H7C1W4 665 aa7.76□□□□□ -1.17
PCGEM1-201ENST00000454040 NDUFV2P19404 249 aa7.76□□□□□ -1.17
PCGEM1-201ENST00000454040 LINC00114Q6XXX2 140 aa7.76□□□□□ -1.17
PCGEM1-201ENST00000454040 ZNF395Q9H8N7 513 aaPredicted RBP7.76□□□□□ -1.17
PCGEM1-201ENST00000454040 USTQ9Y2C2 406 aa7.76□□□□□ -1.17
PCGEM1-201ENST00000454040 RBM47A0AV96 593 aaKnown RBP7.76□□□□□ -1.17
PCGEM1-201ENST00000454040 SPIRE2Q8WWL2 714 aa7.76□□□□□ -1.17
PCGEM1-201ENST00000454040 GTPBP3Q969Y2 492 aaKnown RBP7.76□□□□□ -1.17
PCGEM1-201ENST00000454040 RUSC2Q8N2Y8 1516 aa7.75□□□□□ -1.17
PCGEM1-201ENST00000454040 POM121CA8CG34 1229 aa7.75□□□□□ -1.17
PCGEM1-201ENST00000454040 SKIV2LQ15477 1246 aaKnown RBP7.75□□□□□ -1.17
PCGEM1-201ENST00000454040 CALR3Q96L12 384 aaKnown RBP7.75□□□□□ -1.17
PCGEM1-201ENST00000454040 NBPF14Q5TI25 921 aa7.74□□□□□ -1.17
PCGEM1-201ENST00000454040 SH3BP5LQ7L8J4 393 aa7.74□□□□□ -1.17
PCGEM1-201ENST00000454040 PBXIP1Q96AQ6 731 aa7.74□□□□□ -1.17
PCGEM1-201ENST00000454040 BCCIPQ9P287 314 aaKnown RBP eCLIP7.74□□□□□ -1.17
PCGEM1-201ENST00000454040 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.73□□□□□ -1.17
PCGEM1-201ENST00000454040 MOXD2PA6NHM9 499 aa7.73□□□□□ -1.17
PCGEM1-201ENST00000454040 GNB5O14775 395 aa7.73□□□□□ -1.17
PCGEM1-201ENST00000454040 RIPOR1Q6ZS17 1223 aa7.73□□□□□ -1.17
PCGEM1-201ENST00000454040 GLMNQ92990 594 aa7.73□□□□□ -1.17
PCGEM1-201ENST00000454040 ERICH3Q5RHP9 1530 aa7.73□□□□□ -1.17
PCGEM1-201ENST00000454040 MAGEB6P1A0A0J9YX57 407 aa7.72□□□□□ -1.17
PCGEM1-201ENST00000454040 SMARCA5O60264 1052 aaPredicted RBP7.72□□□□□ -1.17
PCGEM1-201ENST00000454040 GATA4P43694 442 aa7.72□□□□□ -1.17
PCGEM1-201ENST00000454040 EDARADDQ8WWZ3 215 aa7.72□□□□□ -1.17
PCGEM1-201ENST00000454040 NOP53Q9NZM5 478 aaKnown RBP7.72□□□□□ -1.17
PCGEM1-201ENST00000454040 GDF2Q9UK05 429 aaPredicted RBP7.72□□□□□ -1.17
PCGEM1-201ENST00000454040 SRPK2P78362 688 aaKnown RBP7.71□□□□□ -1.17
PCGEM1-201ENST00000454040 RSPO4Q2I0M5 234 aaPredicted RBP7.71□□□□□ -1.17
PCGEM1-201ENST00000454040 TXNDC2Q86VQ3 553 aa7.71□□□□□ -1.18
PCGEM1-201ENST00000454040 CSB-PGBD3P0DP91 1061 aa7.7□□□□□ -1.18
PCGEM1-201ENST00000454040 YBX3P16989 372 aaKnown RBP eCLIP7.7□□□□□ -1.18
PCGEM1-201ENST00000454040 HOXB4P17483 251 aaPredicted RBP7.7□□□□□ -1.18
PCGEM1-201ENST00000454040 C1orf229Q6ZS94 237 aaPredicted RBP7.7□□□□□ -1.18
PCGEM1-201ENST00000454040 MRRFQ96E11 262 aaKnown RBP7.7□□□□□ -1.18
PCGEM1-201ENST00000454040 KRTAP4-9Q9BYQ8 210 aa7.7□□□□□ -1.18
PCGEM1-201ENST00000454040 GDPD2Q9HCC8 539 aa7.7□□□□□ -1.18
PCGEM1-201ENST00000454040 CDV3Q9UKY7 258 aaKnown RBP7.7□□□□□ -1.18
PCGEM1-201ENST00000454040 CFTRP13569 1480 aa7.7□□□□□ -1.18
PCGEM1-201ENST00000454040 CFAP99D6REC4 459 aa7.69□□□□□ -1.18
PCGEM1-201ENST00000454040 NKAPLQ5M9Q1 402 aa7.69□□□□□ -1.18
PCGEM1-201ENST00000454040 FBXO31Q5XUX0 539 aaPredicted RBP7.69□□□□□ -1.18
PCGEM1-201ENST00000454040 SPATA32Q96LK8 384 aa7.69□□□□□ -1.18
PCGEM1-201ENST00000454040 KCTD15Q96SI1 283 aaPredicted RBP7.69□□□□□ -1.18
PCGEM1-201ENST00000454040 CLIP1P30622 1438 aa7.68□□□□□ -1.18
PCGEM1-201ENST00000454040 RHOQP17081 205 aa7.68□□□□□ -1.18
PCGEM1-201ENST00000454040 RFX1P22670 979 aa7.68□□□□□ -1.18
PCGEM1-201ENST00000454040 GJA5P36382 358 aa7.68□□□□□ -1.18
PCGEM1-201ENST00000454040 ERFEQ4G0M1 354 aa7.68□□□□□ -1.18
PCGEM1-201ENST00000454040 PRICKLE2Q7Z3G6 844 aa7.68□□□□□ -1.18
PCGEM1-201ENST00000454040 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.68□□□□□ -1.18
PCGEM1-201ENST00000454040 POLR3EQ9NVU0 708 aa7.68□□□□□ -1.18
PCGEM1-201ENST00000454040 DYRK1BQ9Y463 629 aa7.68□□□□□ -1.18
PCGEM1-201ENST00000454040 VPS8Q8N3P4 1428 aa7.68□□□□□ -1.18
PCGEM1-201ENST00000454040 KLRG1Q96E93 195 aa7.67□□□□□ -1.18
PCGEM1-201ENST00000454040 CADPSQ9ULU8 1353 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms