RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 CCNL1Q9UK58 526 aaPredicted RBP10.58□□□□□ -0.72
RBM39-218ENST00000449489 CICQ96RK0 1608 aaPredicted RBP10.58□□□□□ -0.72
RBM39-218ENST00000449489 SOX12O15370 315 aa10.57□□□□□ -0.72
RBM39-218ENST00000449489 ANKRD24Q8TF21 1146 aa10.57□□□□□ -0.72
RBM39-218ENST00000449489 KLRG1Q96E93 195 aa10.57□□□□□ -0.72
RBM39-218ENST00000449489 WDR90Q96KV7 1748 aa10.56□□□□□ -0.72
RBM39-218ENST00000449489 RAB3GAP2Q9H2M9 1393 aa10.56□□□□□ -0.72
RBM39-218ENST00000449489 KCNQ4P56696 695 aa10.56□□□□□ -0.72
RBM39-218ENST00000449489 RBM46Q8TBY0 533 aaKnown RBP10.56□□□□□ -0.72
RBM39-218ENST00000449489 DDX54Q8TDD1 881 aaKnown RBP10.56□□□□□ -0.72
RBM39-218ENST00000449489 LTN1O94822 1766 aa10.56□□□□□ -0.72
RBM39-218ENST00000449489 IGSF1Q8N6C5 1336 aa10.56□□□□□ -0.72
RBM39-218ENST00000449489 KTN1Q86UP2 1357 aaKnown RBP10.55□□□□□ -0.72
RBM39-218ENST00000449489 FAM208AQ9UK61 1670 aaKnown RBP10.55□□□□□ -0.72
RBM39-218ENST00000449489 TNS4Q8IZW8 715 aa10.55□□□□□ -0.72
RBM39-218ENST00000449489 USP47Q96K76 1375 aa10.54□□□□□ -0.72
RBM39-218ENST00000449489 FSTL1Q12841 308 aa10.54□□□□□ -0.72
RBM39-218ENST00000449489 MSL1Q68DK7 614 aa10.54□□□□□ -0.72
RBM39-218ENST00000449489 MON2Q7Z3U7 1717 aa10.54□□□□□ -0.72
RBM39-218ENST00000449489 DOT1LQ8TEK3 1739 aa10.54□□□□□ -0.72
RBM39-218ENST00000449489 SYTL4Q96C24 671 aaPredicted RBP10.54□□□□□ -0.72
RBM39-218ENST00000449489 TAF1LQ8IZX4 1826 aa10.54□□□□□ -0.72
RBM39-218ENST00000449489 IP6K1Q92551 441 aa10.53□□□□□ -0.72
RBM39-218ENST00000449489 C5P01031 1676 aa10.53□□□□□ -0.72
RBM39-218ENST00000449489 GTPBP6O43824 516 aaPredicted RBP10.52□□□□□ -0.73
RBM39-218ENST00000449489 NKX1-1Q15270 411 aaPredicted RBP10.52□□□□□ -0.73
RBM39-218ENST00000449489 ZCRB1Q8TBF4 217 aaKnown RBP10.52□□□□□ -0.73
RBM39-218ENST00000449489 TSHZ2Q9NRE2 1034 aa10.52□□□□□ -0.73
RBM39-218ENST00000449489 PCDHB13Q9Y5F0 798 aa10.52□□□□□ -0.73
RBM39-218ENST00000449489 CGNL1Q0VF96 1302 aa10.52□□□□□ -0.73
RBM39-218ENST00000449489 NSD3Q9BZ95 1437 aa10.51□□□□□ -0.73
RBM39-218ENST00000449489 GALR2O43603 387 aaPredicted RBP10.51□□□□□ -0.73
RBM39-218ENST00000449489 SLC34A2O95436 690 aa10.51□□□□□ -0.73
RBM39-218ENST00000449489 C10orf71Q711Q0 1435 aa10.5□□□□□ -0.73
RBM39-218ENST00000449489 KIF13BQ9NQT8 1826 aa10.5□□□□□ -0.73
RBM39-218ENST00000449489 PSEN1P49768 467 aa10.5□□□□□ -0.73
RBM39-218ENST00000449489 TGFB2P61812 414 aa10.5□□□□□ -0.73
RBM39-218ENST00000449489 SBNO2Q9Y2G9 1366 aa10.5□□□□□ -0.73
RBM39-218ENST00000449489 UBR3Q6ZT12 1888 aa10.49□□□□□ -0.73
RBM39-218ENST00000449489 SSFA2P28290 1259 aa10.49□□□□□ -0.73
RBM39-218ENST00000449489 PHF12Q96QT6 1004 aa10.49□□□□□ -0.73
RBM39-218ENST00000449489 NMRK2Q9NPI5 230 aa10.49□□□□□ -0.73
RBM39-218ENST00000449489 C4BP0C0L5 1744 aa10.48□□□□□ -0.73
RBM39-218ENST00000449489 NME9Q86XW9 330 aa10.48□□□□□ -0.73
RBM39-218ENST00000449489 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.48□□□□□ -0.73
RBM39-218ENST00000449489 C16orf71Q8IYS4 520 aaPredicted RBP10.48□□□□□ -0.73
RBM39-218ENST00000449489 KIF12Q96FN5 646 aa10.48□□□□□ -0.73
RBM39-218ENST00000449489 PCDHB8Q9UN66 801 aa10.48□□□□□ -0.73
RBM39-218ENST00000449489 PLEKHG2Q9H7P9 1386 aa10.48□□□□□ -0.73
RBM39-218ENST00000449489 SMARCC1Q92922 1105 aaPredicted RBP10.47□□□□□ -0.73
RBM39-218ENST00000449489 AK7Q96M32 723 aa10.47□□□□□ -0.73
RBM39-218ENST00000449489 PALLDQ8WX93 1383 aa10.47□□□□□ -0.73
RBM39-218ENST00000449489 EDC4Q6P2E9 1401 aaKnown RBP10.47□□□□□ -0.73
RBM39-218ENST00000449489 CD163L1Q9NR16 1453 aa10.47□□□□□ -0.73
RBM39-218ENST00000449489 TOGARAM1Q9Y4F4 1720 aa10.47□□□□□ -0.73
RBM39-218ENST00000449489 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.46□□□□□ -0.73
RBM39-218ENST00000449489 WWC3Q9ULE0 1092 aa10.46□□□□□ -0.73
RBM39-218ENST00000449489 PXDNLA1KZ92 1463 aa10.46□□□□□ -0.74
RBM39-218ENST00000449489 MEGF6O75095 1541 aa10.46□□□□□ -0.74
RBM39-218ENST00000449489 KIAA1551Q9HCM1 1747 aa10.46□□□□□ -0.74
RBM39-218ENST00000449489 KDM2BQ8NHM5 1336 aa10.45□□□□□ -0.74
RBM39-218ENST00000449489 MAP3K13O43283 966 aa10.45□□□□□ -0.74
RBM39-218ENST00000449489 HOXC9P31274 260 aa10.45□□□□□ -0.74
RBM39-218ENST00000449489 HTRA3P83110 453 aa10.45□□□□□ -0.74
RBM39-218ENST00000449489 HDGFL2Q7Z4V5 671 aaPredicted RBP10.45□□□□□ -0.74
RBM39-218ENST00000449489 AMIGO3Q86WK7 504 aa10.45□□□□□ -0.74
RBM39-218ENST00000449489 PCDH10Q9P2E7 1040 aa10.45□□□□□ -0.74
RBM39-218ENST00000449489 BRCA1P38398 1863 aaKnown RBP10.44□□□□□ -0.74
RBM39-218ENST00000449489 ARHGAP27Q6ZUM4 889 aa10.44□□□□□ -0.74
RBM39-218ENST00000449489 PUS7Q96PZ0 661 aaKnown RBP10.44□□□□□ -0.74
RBM39-218ENST00000449489 ARFGEF1Q9Y6D6 1849 aa10.44□□□□□ -0.74
RBM39-218ENST00000449489 MAP3K19Q56UN5 1328 aa10.43□□□□□ -0.74
RBM39-218ENST00000449489 MAP2P11137 1827 aaKnown RBP10.43□□□□□ -0.74
RBM39-218ENST00000449489 HSPA1AP0DMV8 641 aaKnown RBP10.43□□□□□ -0.74
RBM39-218ENST00000449489 HSPA1BP0DMV9 641 aaKnown RBP10.43□□□□□ -0.74
RBM39-218ENST00000449489 IFNL1Q8IU54 200 aa10.43□□□□□ -0.74
RBM39-218ENST00000449489 SMC1BQ8NDV3 1235 aa10.43□□□□□ -0.74
RBM39-218ENST00000449489 LTV1Q96GA3 475 aaPredicted RBP10.43□□□□□ -0.74
RBM39-218ENST00000449489 TERF2IPQ9NYB0 399 aa10.43□□□□□ -0.74
RBM39-218ENST00000449489 BCS1LQ9Y276 419 aa10.43□□□□□ -0.74
RBM39-218ENST00000449489 RGPD2P0DJD1 1756 aa10.43□□□□□ -0.74
RBM39-218ENST00000449489 ITGB4P16144 1822 aa10.42□□□□□ -0.74
RBM39-218ENST00000449489 N4BP2Q86UW6 1770 aaPredicted RBP10.42□□□□□ -0.74
RBM39-218ENST00000449489 RTL1A6NKG5 1358 aa10.42□□□□□ -0.74
RBM39-218ENST00000449489 PCDH11XQ9BZA7 1347 aa10.42□□□□□ -0.74
RBM39-218ENST00000449489 PCDH11YQ9BZA8 1340 aa10.42□□□□□ -0.74
RBM39-218ENST00000449489 ZC3H4Q9UPT8 1303 aaKnown RBP10.42□□□□□ -0.74
RBM39-218ENST00000449489 TNRC6CQ9HCJ0 1690 aaKnown RBP10.42□□□□□ -0.74
RBM39-218ENST00000449489 MMP10P09238 476 aa10.42□□□□□ -0.74
RBM39-218ENST00000449489 C9orf131Q5VYM1 1079 aa10.42□□□□□ -0.74
RBM39-218ENST00000449489 NLGN1Q8N2Q7 840 aa10.42□□□□□ -0.74
RBM39-218ENST00000449489 RAPGEF4Q8WZA2 1011 aa10.42□□□□□ -0.74
RBM39-218ENST00000449489 A0A0G2JLW4 131 aa10.41□□□□□ -0.74
RBM39-218ENST00000449489 PHF14O94880 888 aa10.41□□□□□ -0.74
RBM39-218ENST00000449489 TATP17735 454 aaPredicted RBP10.41□□□□□ -0.74
RBM39-218ENST00000449489 AMPHP49418 695 aa10.41□□□□□ -0.74
RBM39-218ENST00000449489 NBPF6Q5VWK0 638 aa10.41□□□□□ -0.74
RBM39-218ENST00000449489 MPRIPQ6WCQ1 1025 aa10.41□□□□□ -0.74
RBM39-218ENST00000449489 NBPF4Q96M43 638 aa10.41□□□□□ -0.74
RBM39-218ENST00000449489 PKD1L3Q7Z443 1732 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms