RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 CCDC8Q9H0W5 538 aaPredicted RBP12.31□□□□□ -0.44
CTC1-202ENST00000449476 TCEAL9Q9UHQ7 104 aa12.31□□□□□ -0.44
CTC1-202ENST00000449476 HSP90AB2PQ58FF8 381 aa12.3□□□□□ -0.44
CTC1-202ENST00000449476 MYD88Q99836 296 aa12.3□□□□□ -0.44
CTC1-202ENST00000449476 SLC3A2P08195 630 aaKnown RBP12.3□□□□□ -0.44
CTC1-202ENST00000449476 TNNQ9UQP3 1299 aa12.3□□□□□ -0.44
CTC1-202ENST00000449476 RBM10P98175 930 aaKnown RBP12.3□□□□□ -0.44
CTC1-202ENST00000449476 C8orf34Q49A92 452 aa12.3□□□□□ -0.44
CTC1-202ENST00000449476 TTC22Q5TAA0 569 aa12.3□□□□□ -0.44
CTC1-202ENST00000449476 ZSCAN30Q86W11 494 aa12.3□□□□□ -0.44
CTC1-202ENST00000449476 KIAA0556O60303 1618 aa12.3□□□□□ -0.44
CTC1-202ENST00000449476 SERPINC1P01008 464 aa12.29□□□□□ -0.44
CTC1-202ENST00000449476 FILIP1LQ4L180 1135 aa12.29□□□□□ -0.44
CTC1-202ENST00000449476 MEX3CQ5U5Q3 659 aaKnown RBP12.29□□□□□ -0.44
CTC1-202ENST00000449476 PZPP20742 1482 aa12.29□□□□□ -0.44
CTC1-202ENST00000449476 CCDC69A6NI79 296 aa12.29□□□□□ -0.44
CTC1-202ENST00000449476 RLBP1P12271 317 aa12.29□□□□□ -0.44
CTC1-202ENST00000449476 A2MP01023 1474 aa12.29□□□□□ -0.44
CTC1-202ENST00000449476 IDH1O75874 414 aaKnown RBP12.29□□□□□ -0.44
CTC1-202ENST00000449476 MEIS3Q99687 375 aa12.29□□□□□ -0.44
CTC1-202ENST00000449476 CTDP1Q9Y5B0 961 aaPredicted RBP12.29□□□□□ -0.44
CTC1-202ENST00000449476 ARHGEF12Q9NZN5 1544 aa12.29□□□□□ -0.44
CTC1-202ENST00000449476 TXLNAP40222 546 aa12.29□□□□□ -0.44
CTC1-202ENST00000449476 NAP1L1P55209 391 aaKnown RBP12.29□□□□□ -0.44
CTC1-202ENST00000449476 MAP3K11Q16584 847 aa12.29□□□□□ -0.44
CTC1-202ENST00000449476 TSHZ3Q63HK5 1081 aa12.29□□□□□ -0.44
CTC1-202ENST00000449476 NUP133Q8WUM0 1156 aa12.29□□□□□ -0.44
CTC1-202ENST00000449476 LIMCH1Q9UPQ0 1083 aa12.29□□□□□ -0.44
CTC1-202ENST00000449476 BRPF1P55201 1214 aaPredicted RBP12.28□□□□□ -0.44
CTC1-202ENST00000449476 SAMD1Q6SPF0 538 aaPredicted RBP12.28□□□□□ -0.44
CTC1-202ENST00000449476 SH2B1Q9NRF2 756 aaPredicted RBP12.28□□□□□ -0.44
CTC1-202ENST00000449476 TTLL5Q6EMB2 1281 aa12.28□□□□□ -0.44
CTC1-202ENST00000449476 PIK3C2GO75747 1445 aa12.28□□□□□ -0.44
CTC1-202ENST00000449476 PI4KAP2A4QPH2 592 aa12.28□□□□□ -0.44
CTC1-202ENST00000449476 CDKL5O76039 1030 aa12.28□□□□□ -0.44
CTC1-202ENST00000449476 PPP1R42Q7Z4L9 355 aa12.28□□□□□ -0.44
CTC1-202ENST00000449476 CEP57L1Q8IYX8 460 aa12.28□□□□□ -0.44
CTC1-202ENST00000449476 PI4KAP1Q8N8J0 262 aa12.28□□□□□ -0.44
CTC1-202ENST00000449476 C8orf58Q8NAV2 365 aa12.28□□□□□ -0.44
CTC1-202ENST00000449476 ECHDC1Q9NTX5 307 aa12.28□□□□□ -0.44
CTC1-202ENST00000449476 HYPKQ9NX55 129 aa12.28□□□□□ -0.44
CTC1-202ENST00000449476 POLKQ9UBT6 870 aa12.28□□□□□ -0.44
CTC1-202ENST00000449476 U3KPZ7 1027 aaPredicted RBP12.28□□□□□ -0.44
CTC1-202ENST00000449476 IMMTQ16891 758 aaKnown RBP12.27□□□□□ -0.44
CTC1-202ENST00000449476 TDO2P48775 406 aa12.27□□□□□ -0.45
CTC1-202ENST00000449476 FILIP1Q7Z7B0 1213 aa12.27□□□□□ -0.45
CTC1-202ENST00000449476 PUS7Q96PZ0 661 aaKnown RBP12.27□□□□□ -0.45
CTC1-202ENST00000449476 LARP6Q9BRS8 491 aaKnown RBP12.27□□□□□ -0.45
CTC1-202ENST00000449476 ADAMTS12P58397 1594 aa12.26□□□□□ -0.45
CTC1-202ENST00000449476 OFD1O75665 1012 aa12.26□□□□□ -0.45
CTC1-202ENST00000449476 METTL24Q5JXM2 366 aa12.26□□□□□ -0.45
CTC1-202ENST00000449476 SPINK5Q9NQ38 1064 aaPredicted RBP12.26□□□□□ -0.45
CTC1-202ENST00000449476 CCP110O43303 1012 aa12.26□□□□□ -0.45
CTC1-202ENST00000449476 BAG4O95429 457 aaKnown RBP12.26□□□□□ -0.45
CTC1-202ENST00000449476 STARD3NLO95772 234 aa12.26□□□□□ -0.45
CTC1-202ENST00000449476 IFIT1P09914 478 aaKnown RBP12.26□□□□□ -0.45
CTC1-202ENST00000449476 SDSP20132 328 aa12.26□□□□□ -0.45
CTC1-202ENST00000449476 CAMK4Q16566 473 aa12.26□□□□□ -0.45
CTC1-202ENST00000449476 SCAND2PQ9GZW5 306 aaPredicted RBP12.26□□□□□ -0.45
CTC1-202ENST00000449476 SHANK2Q9UPX8 1470 aa12.26□□□□□ -0.45
CTC1-202ENST00000449476 ANXA1P04083 346 aa12.26□□□□□ -0.45
CTC1-202ENST00000449476 PRKCSHP14314 528 aaPredicted RBP12.26□□□□□ -0.45
CTC1-202ENST00000449476 MRPL50Q8N5N7 158 aaKnown RBP12.26□□□□□ -0.45
CTC1-202ENST00000449476 ANKRD44Q8N8A2 993 aa12.26□□□□□ -0.45
CTC1-202ENST00000449476 CCDC43Q96MW1 224 aaKnown RBP12.26□□□□□ -0.45
CTC1-202ENST00000449476 ASXL2Q76L83 1435 aa12.26□□□□□ -0.45
CTC1-202ENST00000449476 A0A087WZG4 1122 aa12.26□□□□□ -0.45
CTC1-202ENST00000449476 HSP90B2PQ58FF3 399 aa12.26□□□□□ -0.45
CTC1-202ENST00000449476 PIK3R4Q99570 1358 aa12.25□□□□□ -0.45
CTC1-202ENST00000449476 UBAC1Q9BSL1 405 aa12.25□□□□□ -0.45
CTC1-202ENST00000449476 GDPD2Q9HCC8 539 aa12.25□□□□□ -0.45
CTC1-202ENST00000449476 MAP3K2Q9Y2U5 619 aa12.25□□□□□ -0.45
CTC1-202ENST00000449476 CCDC183Q5T5S1 534 aa12.25□□□□□ -0.45
CTC1-202ENST00000449476 CCDC112Q8NEF3 446 aa12.25□□□□□ -0.45
CTC1-202ENST00000449476 SMARCE1Q969G3 411 aa12.25□□□□□ -0.45
CTC1-202ENST00000449476 AKAP2Q9Y2D5 859 aa12.25□□□□□ -0.45
CTC1-202ENST00000449476 IKQ13123 557 aaPredicted RBP12.25□□□□□ -0.45
CTC1-202ENST00000449476 LRP2BPQ9P2M1 347 aa12.25□□□□□ -0.45
CTC1-202ENST00000449476 ZRANB1Q9UGI0 708 aa12.25□□□□□ -0.45
CTC1-202ENST00000449476 EIF2AK4Q9P2K8 1649 aaKnown RBP12.25□□□□□ -0.45
CTC1-202ENST00000449476 PIP4K2AP48426 406 aaPredicted RBP12.25□□□□□ -0.45
CTC1-202ENST00000449476 DHX8Q14562 1220 aaKnown RBP12.25□□□□□ -0.45
CTC1-202ENST00000449476 AIDAQ96BJ3 306 aa12.25□□□□□ -0.45
CTC1-202ENST00000449476 ACBD3Q9H3P7 528 aa12.25□□□□□ -0.45
CTC1-202ENST00000449476 EVI5LQ96CN4 794 aa12.24□□□□□ -0.45
CTC1-202ENST00000449476 VAMP4O75379 141 aa12.24□□□□□ -0.45
CTC1-202ENST00000449476 RAI14Q9P0K7 980 aa12.24□□□□□ -0.45
CTC1-202ENST00000449476 DACH1Q9UI36 760 aa12.24□□□□□ -0.45
CTC1-202ENST00000449476 UHRF1BP1Q6BDS2 1440 aa12.24□□□□□ -0.45
CTC1-202ENST00000449476 COL17A1Q9UMD9 1497 aaPredicted RBP12.24□□□□□ -0.45
CTC1-202ENST00000449476 UQCRHLA0A096LP55 91 aa12.23□□□□□ -0.45
CTC1-202ENST00000449476 UQCRHP07919 91 aa12.23□□□□□ -0.45
CTC1-202ENST00000449476 EPS15P42566 896 aa12.23□□□□□ -0.45
CTC1-202ENST00000449476 TSPYL6Q8N831 410 aa12.23□□□□□ -0.45
CTC1-202ENST00000449476 RHPN1Q8TCX5 695 aa12.23□□□□□ -0.45
CTC1-202ENST00000449476 DNMT1P26358 1616 aaKnown RBP12.23□□□□□ -0.45
CTC1-202ENST00000449476 PDE1AP54750 535 aa12.23□□□□□ -0.45
CTC1-202ENST00000449476 EIF4A2Q14240 407 aaKnown RBP12.23□□□□□ -0.45
CTC1-202ENST00000449476 CDK5RAP3Q96JB5 506 aa12.23□□□□□ -0.45
CTC1-202ENST00000449476 MAGEC2Q9UBF1 373 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms