RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 NFATC2IPQ8NCF5 419 aa19.07■□□□□ 0.64
SHANK2-210ENST00000449116 CDCA7LQ96GN5 454 aa19.07■□□□□ 0.64
SHANK2-210ENST00000449116 SPINK5Q9NQ38 1064 aaPredicted RBP19.07■□□□□ 0.64
SHANK2-210ENST00000449116 BABAM1Q9NWV8 329 aa19.07■□□□□ 0.64
SHANK2-210ENST00000449116 TMOD3Q9NYL9 352 aa19.07■□□□□ 0.64
SHANK2-210ENST00000449116 LAS1LQ9Y4W2 734 aaKnown RBP19.07■□□□□ 0.64
SHANK2-210ENST00000449116 SLFN5Q08AF3 891 aa19.06■□□□□ 0.64
SHANK2-210ENST00000449116 FAM196AQ6ZSG2 479 aa19.06■□□□□ 0.64
SHANK2-210ENST00000449116 ACSBG1Q96GR2 724 aa19.06■□□□□ 0.64
SHANK2-210ENST00000449116 MYH16Q9H6N6 1097 aa19.06■□□□□ 0.64
SHANK2-210ENST00000449116 SIPA1L3O60292 1781 aaPredicted RBP19.06■□□□□ 0.64
SHANK2-210ENST00000449116 BTBD11A6QL63 1104 aa19.05■□□□□ 0.64
SHANK2-210ENST00000449116 CHL1O00533 1208 aa19.05■□□□□ 0.64
SHANK2-210ENST00000449116 PRIM1P49642 420 aaKnown RBP19.05■□□□□ 0.64
SHANK2-210ENST00000449116 SYTL4Q96C24 671 aaPredicted RBP19.05■□□□□ 0.64
SHANK2-210ENST00000449116 MIS18AQ9NYP9 233 aa19.04■□□□□ 0.64
SHANK2-210ENST00000449116 TSPYL4Q9UJ04 414 aa19.04■□□□□ 0.64
SHANK2-210ENST00000449116 TRMT2AQ8IZ69 625 aaKnown RBP19.03■□□□□ 0.64
SHANK2-210ENST00000449116 PIGBQ92521 554 aa19.03■□□□□ 0.64
SHANK2-210ENST00000449116 MBIPQ9NS73 344 aa19.03■□□□□ 0.64
SHANK2-210ENST00000449116 FANCIQ9NVI1 1328 aa19.02■□□□□ 0.64
SHANK2-210ENST00000449116 ITGB4P16144 1822 aa19.02■□□□□ 0.64
SHANK2-210ENST00000449116 TSR2Q969E8 191 aaKnown RBP19.02■□□□□ 0.64
SHANK2-210ENST00000449116 NHSQ6T4R5 1651 aa19.01■□□□□ 0.63
SHANK2-210ENST00000449116 KCNQ2O43526 872 aa19.01■□□□□ 0.63
SHANK2-210ENST00000449116 DUSP27Q5VZP5 1158 aa19.01■□□□□ 0.63
SHANK2-210ENST00000449116 ZNF790Q6PG37 636 aa19■□□□□ 0.63
SHANK2-210ENST00000449116 KDM3BQ7LBC6 1761 aa19■□□□□ 0.63
SHANK2-210ENST00000449116 KAT6BQ8WYB5 2073 aa18.99■□□□□ 0.63
SHANK2-210ENST00000449116 SLC39A6Q13433 755 aa18.99■□□□□ 0.63
SHANK2-210ENST00000449116 TTC5Q8N0Z6 440 aa18.99■□□□□ 0.63
SHANK2-210ENST00000449116 SBF2Q86WG5 1849 aa18.98■□□□□ 0.63
SHANK2-210ENST00000449116 KCNQ3O43525 872 aa18.98■□□□□ 0.63
SHANK2-210ENST00000449116 BCL11BQ9C0K0 894 aaPredicted RBP18.98■□□□□ 0.63
SHANK2-210ENST00000449116 PAPPAQ13219 1627 aa18.98■□□□□ 0.63
SHANK2-210ENST00000449116 ATG3Q9NT62 314 aa18.97■□□□□ 0.63
SHANK2-210ENST00000449116 EIF4A1P60842 406 aaKnown RBP18.96■□□□□ 0.63
SHANK2-210ENST00000449116 PTF1AQ7RTS3 328 aa18.96■□□□□ 0.63
SHANK2-210ENST00000449116 ASAP1Q9ULH1 1129 aa18.96■□□□□ 0.63
SHANK2-210ENST00000449116 TRIM37O94972 964 aa18.95■□□□□ 0.62
SHANK2-210ENST00000449116 EXOSC9Q06265 439 aaKnown RBP18.95■□□□□ 0.62
SHANK2-210ENST00000449116 SMARCC1Q92922 1105 aaPredicted RBP18.95■□□□□ 0.62
SHANK2-210ENST00000449116 FMNL2Q96PY5 1086 aa18.94■□□□□ 0.62
SHANK2-210ENST00000449116 KCPQ6ZWJ8 1503 aa18.94■□□□□ 0.62
SHANK2-210ENST00000449116 BTAF1O14981 1849 aa18.93■□□□□ 0.62
SHANK2-210ENST00000449116 ZNF496Q96IT1 587 aaPredicted RBP18.93■□□□□ 0.62
SHANK2-210ENST00000449116 UBR2Q8IWV8 1755 aa18.93■□□□□ 0.62
SHANK2-210ENST00000449116 PALLDQ8WX93 1383 aa18.93■□□□□ 0.62
SHANK2-210ENST00000449116 HEG1Q9ULI3 1381 aa18.93■□□□□ 0.62
SHANK2-210ENST00000449116 KRT24Q2M2I5 525 aa18.92■□□□□ 0.62
SHANK2-210ENST00000449116 C8orf58Q8NAV2 365 aa18.92■□□□□ 0.62
SHANK2-210ENST00000449116 PTCD1O75127 700 aaKnown RBP18.91■□□□□ 0.62
SHANK2-210ENST00000449116 CT47B1P0C2W7 299 aaPredicted RBP18.91■□□□□ 0.62
SHANK2-210ENST00000449116 SOS1Q07889 1333 aaPredicted RBP18.91■□□□□ 0.62
SHANK2-210ENST00000449116 TWISTNBQ3B726 338 aaPredicted RBP18.9■□□□□ 0.62
SHANK2-210ENST00000449116 TSPYL6Q8N831 410 aa18.9■□□□□ 0.62
SHANK2-210ENST00000449116 RBM42Q9BTD8 480 aaKnown RBP18.9■□□□□ 0.62
SHANK2-210ENST00000449116 EP400Q96L91 3159 aa18.89■□□□□ 0.61
SHANK2-210ENST00000449116 ELL2O00472 640 aaPredicted RBP18.89■□□□□ 0.61
SHANK2-210ENST00000449116 GIGYF1O75420 1035 aaPredicted RBP18.89■□□□□ 0.61
SHANK2-210ENST00000449116 HOXB7P09629 217 aa18.89■□□□□ 0.61
SHANK2-210ENST00000449116 SNRPA1P09661 255 aaKnown RBP18.89■□□□□ 0.61
SHANK2-210ENST00000449116 VSIG10Q8N0Z9 540 aa18.89■□□□□ 0.61
SHANK2-210ENST00000449116 LOC102724428A0A0B4J2F2 783 aa18.88■□□□□ 0.61
SHANK2-210ENST00000449116 VAMP4O75379 141 aa18.88■□□□□ 0.61
SHANK2-210ENST00000449116 SIK1P57059 783 aa18.88■□□□□ 0.61
SHANK2-210ENST00000449116 CENPBP07199 599 aaPredicted RBP18.87■□□□□ 0.61
SHANK2-210ENST00000449116 TNS1Q9HBL0 1735 aaKnown RBP18.86■□□□□ 0.61
SHANK2-210ENST00000449116 PRAMEF22A3QJZ6 481 aa18.86■□□□□ 0.61
SHANK2-210ENST00000449116 APBA3O96018 575 aa18.86■□□□□ 0.61
SHANK2-210ENST00000449116 SLC4A9Q96Q91 983 aa18.86■□□□□ 0.61
SHANK2-210ENST00000449116 TEX13AQ9BXU3 409 aaPredicted RBP18.86■□□□□ 0.61
SHANK2-210ENST00000449116 ATP6V1AP38606 617 aa18.85■□□□□ 0.61
SHANK2-210ENST00000449116 ZNF428Q96B54 188 aa18.85■□□□□ 0.61
SHANK2-210ENST00000449116 CHMP4AQ9BY43 222 aa18.85■□□□□ 0.61
SHANK2-210ENST00000449116 LY75O60449 1722 aa18.84■□□□□ 0.61
SHANK2-210ENST00000449116 PLSCR1O15162 318 aa18.84■□□□□ 0.61
SHANK2-210ENST00000449116 C5P01031 1676 aa18.84■□□□□ 0.61
SHANK2-210ENST00000449116 ZNF831Q5JPB2 1677 aa18.83■□□□□ 0.61
SHANK2-210ENST00000449116 CICQ96RK0 1608 aaPredicted RBP18.83■□□□□ 0.61
SHANK2-210ENST00000449116 EIF2S2P20042 333 aaKnown RBP18.83■□□□□ 0.6
SHANK2-210ENST00000449116 SF3B2Q13435 895 aaKnown RBP18.83■□□□□ 0.6
SHANK2-210ENST00000449116 HDGFL1Q5TGJ6 251 aa18.83■□□□□ 0.6
SHANK2-210ENST00000449116 DNAJC10Q8IXB1 793 aa18.83■□□□□ 0.6
SHANK2-210ENST00000449116 CCNL1Q9UK58 526 aaPredicted RBP18.83■□□□□ 0.6
SHANK2-210ENST00000449116 USP16Q9Y5T5 823 aa18.83■□□□□ 0.6
SHANK2-210ENST00000449116 SLC27A3Q5K4L6 730 aa18.82■□□□□ 0.6
SHANK2-210ENST00000449116 CCDC30Q5VVM6 783 aa18.82■□□□□ 0.6
SHANK2-210ENST00000449116 CCDC125Q86Z20 511 aa18.82■□□□□ 0.6
SHANK2-210ENST00000449116 LAMB4A4D0S4 1761 aa18.82■□□□□ 0.6
SHANK2-210ENST00000449116 TJP1Q07157 1748 aa18.82■□□□□ 0.6
SHANK2-210ENST00000449116 STARD3NLO95772 234 aa18.81■□□□□ 0.6
SHANK2-210ENST00000449116 RARSP54136 660 aaKnown RBP18.81■□□□□ 0.6
SHANK2-210ENST00000449116 ITPK1Q13572 414 aa18.81■□□□□ 0.6
SHANK2-210ENST00000449116 ALDH1L2Q3SY69 923 aa18.81■□□□□ 0.6
SHANK2-210ENST00000449116 RCAN3Q9UKA8 241 aa18.81■□□□□ 0.6
SHANK2-210ENST00000449116 NECTIN2Q92692 538 aa18.8■□□□□ 0.6
SHANK2-210ENST00000449116 RGPD3A6NKT7 1758 aaPredicted RBP18.8■□□□□ 0.6
SHANK2-210ENST00000449116 RGPD4Q7Z3J3 1758 aa18.8■□□□□ 0.6
SHANK2-210ENST00000449116 CYP19A1P11511 503 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms