RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-208ENST00000448217 RGS17Q9UGC6 210 aaPredicted RBP15.47■□□□□ 0.07
SCAP-208ENST00000448217 TSR2Q969E8 191 aaKnown RBP15.46■□□□□ 0.07
SCAP-208ENST00000448217 SOS1Q07889 1333 aaPredicted RBP15.45■□□□□ 0.06
SCAP-208ENST00000448217 ILDR1Q86SU0 546 aaPredicted RBP15.45■□□□□ 0.06
SCAP-208ENST00000448217 SEPT12Q8IYM1 358 aa15.45■□□□□ 0.06
SCAP-208ENST00000448217 ZNF428Q96B54 188 aa15.45■□□□□ 0.06
SCAP-208ENST00000448217 TSPYL4Q9UJ04 414 aa15.45■□□□□ 0.06
SCAP-208ENST00000448217 PAPPAQ13219 1627 aa15.45■□□□□ 0.06
SCAP-208ENST00000448217 DOT1LQ8TEK3 1739 aa15.44■□□□□ 0.06
SCAP-208ENST00000448217 CABP4P57796 275 aa15.44■□□□□ 0.06
SCAP-208ENST00000448217 NFATC2IPQ8NCF5 419 aa15.44■□□□□ 0.06
SCAP-208ENST00000448217 LAS1LQ9Y4W2 734 aaKnown RBP15.44■□□□□ 0.06
SCAP-208ENST00000448217 HEG1Q9ULI3 1381 aa15.44■□□□□ 0.06
SCAP-208ENST00000448217 BRWD3Q6RI45 1802 aa15.43■□□□□ 0.06
SCAP-208ENST00000448217 BTBD11A6QL63 1104 aa15.43■□□□□ 0.06
SCAP-208ENST00000448217 EXOSC9Q06265 439 aaKnown RBP15.43■□□□□ 0.06
SCAP-208ENST00000448217 UBR2Q8IWV8 1755 aa15.43■□□□□ 0.06
SCAP-208ENST00000448217 RXRBP28702 533 aa15.42■□□□□ 0.06
SCAP-208ENST00000448217 SBF2Q86WG5 1849 aa15.41■□□□□ 0.06
SCAP-208ENST00000448217 HOXB7P09629 217 aa15.41■□□□□ 0.06
SCAP-208ENST00000448217 EIF4A1P60842 406 aaKnown RBP15.41■□□□□ 0.06
SCAP-208ENST00000448217 ZNF790Q6PG37 636 aa15.41■□□□□ 0.06
SCAP-208ENST00000448217 MIS18AQ9NYP9 233 aa15.41■□□□□ 0.06
SCAP-208ENST00000448217 VAMP4O75379 141 aa15.4■□□□□ 0.06
SCAP-208ENST00000448217 POTEAQ6S8J7 498 aa15.4■□□□□ 0.06
SCAP-208ENST00000448217 C8orf58Q8NAV2 365 aa15.4■□□□□ 0.06
SCAP-208ENST00000448217 TMOD3Q9NYL9 352 aa15.4■□□□□ 0.06
SCAP-208ENST00000448217 RCAN3Q9UKA8 241 aa15.4■□□□□ 0.06
SCAP-208ENST00000448217 NHSQ6T4R5 1651 aa15.4■□□□□ 0.06
SCAP-208ENST00000448217 KAT6BQ8WYB5 2073 aa15.4■□□□□ 0.06
SCAP-208ENST00000448217 CACNA1FO60840 1977 aa15.4■□□□□ 0.06
SCAP-208ENST00000448217 RNF123Q5XPI4 1314 aa15.4■□□□□ 0.06
SCAP-208ENST00000448217 A0A0G2JS52 829 aa15.39■□□□□ 0.05
SCAP-208ENST00000448217 MYT1Q01538 1121 aa15.39■□□□□ 0.05
SCAP-208ENST00000448217 PIGBQ92521 554 aa15.39■□□□□ 0.05
SCAP-208ENST00000448217 BRPF1P55201 1214 aaPredicted RBP15.38■□□□□ 0.05
SCAP-208ENST00000448217 TWISTNBQ3B726 338 aaPredicted RBP15.38■□□□□ 0.05
SCAP-208ENST00000448217 ALDH1L2Q3SY69 923 aa15.38■□□□□ 0.05
SCAP-208ENST00000448217 TSPYL6Q8N831 410 aa15.38■□□□□ 0.05
SCAP-208ENST00000448217 CHMP4AQ9BY43 222 aa15.38■□□□□ 0.05
SCAP-208ENST00000448217 KCPQ6ZWJ8 1503 aa15.38■□□□□ 0.05
SCAP-208ENST00000448217 RGS12O14924 1447 aa15.37■□□□□ 0.05
SCAP-208ENST00000448217 KCNQ3O43525 872 aa15.37■□□□□ 0.05
SCAP-208ENST00000448217 PRIM1P49642 420 aaKnown RBP15.37■□□□□ 0.05
SCAP-208ENST00000448217 RARSP54136 660 aaKnown RBP15.37■□□□□ 0.05
SCAP-208ENST00000448217 KRT27Q7Z3Y8 459 aa15.37■□□□□ 0.05
SCAP-208ENST00000448217 CICQ96RK0 1608 aaPredicted RBP15.36■□□□□ 0.05
SCAP-208ENST00000448217 ZNF831Q5JPB2 1677 aa15.36■□□□□ 0.05
SCAP-208ENST00000448217 TTC5Q8N0Z6 440 aa15.36■□□□□ 0.05
SCAP-208ENST00000448217 GIGYF1O75420 1035 aaPredicted RBP15.35■□□□□ 0.05
SCAP-208ENST00000448217 SLC39A6Q13433 755 aa15.35■□□□□ 0.05
SCAP-208ENST00000448217 KRT24Q2M2I5 525 aa15.35■□□□□ 0.05
SCAP-208ENST00000448217 FAM196AQ6ZSG2 479 aa15.35■□□□□ 0.05
SCAP-208ENST00000448217 ZNF496Q96IT1 587 aaPredicted RBP15.35■□□□□ 0.05
SCAP-208ENST00000448217 FMNL2Q96PY5 1086 aa15.35■□□□□ 0.05
SCAP-208ENST00000448217 ATG3Q9NT62 314 aa15.35■□□□□ 0.05
SCAP-208ENST00000448217 LAMB4A4D0S4 1761 aa15.34■□□□□ 0.05
SCAP-208ENST00000448217 VSIG10Q8N0Z9 540 aa15.34■□□□□ 0.05
SCAP-208ENST00000448217 C5P01031 1676 aa15.33■□□□□ 0.04
SCAP-208ENST00000448217 SNRPA1P09661 255 aaKnown RBP15.33■□□□□ 0.04
SCAP-208ENST00000448217 SMARCC1Q92922 1105 aaPredicted RBP15.33■□□□□ 0.04
SCAP-208ENST00000448217 BTAF1O14981 1849 aa15.33■□□□□ 0.04
SCAP-208ENST00000448217 ELL2O00472 640 aaPredicted RBP15.32■□□□□ 0.04
SCAP-208ENST00000448217 SSH1Q8WYL5 1049 aa15.32■□□□□ 0.04
SCAP-208ENST00000448217 ACSBG1Q96GR2 724 aa15.32■□□□□ 0.04
SCAP-208ENST00000448217 ASAP1Q9ULH1 1129 aa15.32■□□□□ 0.04
SCAP-208ENST00000448217 KCNQ2O43526 872 aa15.31■□□□□ 0.04
SCAP-208ENST00000448217 CCDC30Q5VVM6 783 aa15.31■□□□□ 0.04
SCAP-208ENST00000448217 SYTL4Q96C24 671 aaPredicted RBP15.31■□□□□ 0.04
SCAP-208ENST00000448217 BCL11BQ9C0K0 894 aaPredicted RBP15.31■□□□□ 0.04
SCAP-208ENST00000448217 MRPL50Q8N5N7 158 aaKnown RBP15.3■□□□□ 0.04
SCAP-208ENST00000448217 TEX13AQ9BXU3 409 aaPredicted RBP15.3■□□□□ 0.04
SCAP-208ENST00000448217 SUPT16HQ9Y5B9 1047 aaKnown RBP15.3■□□□□ 0.04
SCAP-208ENST00000448217 LY75O60449 1722 aa15.29■□□□□ 0.04
SCAP-208ENST00000448217 ERBB4Q15303 1308 aa15.29■□□□□ 0.04
SCAP-208ENST00000448217 KIF16BQ96L93 1317 aa15.29■□□□□ 0.04
SCAP-208ENST00000448217 BCAR3O75815 825 aa15.29■□□□□ 0.04
SCAP-208ENST00000448217 RRP1P56182 461 aaKnown RBP15.29■□□□□ 0.04
SCAP-208ENST00000448217 TJP1Q07157 1748 aa15.29■□□□□ 0.04
SCAP-208ENST00000448217 PALLDQ8WX93 1383 aa15.28■□□□□ 0.04
SCAP-208ENST00000448217 FAM182BQ5T319 152 aa15.28■□□□□ 0.04
SCAP-208ENST00000448217 HDGFL1Q5TGJ6 251 aa15.28■□□□□ 0.04
SCAP-208ENST00000448217 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.28■□□□□ 0.04
SCAP-208ENST00000448217 ARHGAP45Q92619 1136 aa15.28■□□□□ 0.04
SCAP-208ENST00000448217 SMC4Q9NTJ3 1288 aa15.28■□□□□ 0.04
SCAP-208ENST00000448217 SLC4A9Q96Q91 983 aa15.27■□□□□ 0.04
SCAP-208ENST00000448217 DBF4Q9UBU7 674 aaPredicted RBP15.27■□□□□ 0.04
SCAP-208ENST00000448217 PTCD1O75127 700 aaKnown RBP15.26■□□□□ 0.03
SCAP-208ENST00000448217 STK31Q9BXU1 1019 aa15.26■□□□□ 0.03
SCAP-208ENST00000448217 USP16Q9Y5T5 823 aa15.26■□□□□ 0.03
SCAP-208ENST00000448217 COL5A3P25940 1745 aaPredicted RBP15.26■□□□□ 0.03
SCAP-208ENST00000448217 RREB1Q92766 1687 aa15.25■□□□□ 0.03
SCAP-208ENST00000448217 LOC102724428A0A0B4J2F2 783 aa15.25■□□□□ 0.03
SCAP-208ENST00000448217 PRAMEF22A3QJZ6 481 aa15.25■□□□□ 0.03
SCAP-208ENST00000448217 IPO8O15397 1037 aaKnown RBP15.25■□□□□ 0.03
SCAP-208ENST00000448217 SIK1P57059 783 aa15.25■□□□□ 0.03
SCAP-208ENST00000448217 PTF1AQ7RTS3 328 aa15.25■□□□□ 0.03
SCAP-208ENST00000448217 DDX21Q9NR30 783 aaKnown RBP eCLIP15.25■□□□□ 0.03
SCAP-208ENST00000448217 RGPD3A6NKT7 1758 aaPredicted RBP15.24■□□□□ 0.03
SCAP-208ENST00000448217 RGPD4Q7Z3J3 1758 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms