RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 RBM6P78332 1123 aaKnown RBP6.7□□□□□ -1.34
LMO3-209ENST00000447609 ARHGEF25Q86VW2 580 aa6.7□□□□□ -1.34
LMO3-209ENST00000447609 ZCRB1Q8TBF4 217 aaKnown RBP6.7□□□□□ -1.34
LMO3-209ENST00000447609 ACSBG1Q96GR2 724 aa6.7□□□□□ -1.34
LMO3-209ENST00000447609 KIF20AO95235 890 aa6.7□□□□□ -1.34
LMO3-209ENST00000447609 SMC5Q8IY18 1101 aa6.7□□□□□ -1.34
LMO3-209ENST00000447609 TRMT2AQ8IZ69 625 aaKnown RBP6.7□□□□□ -1.34
LMO3-209ENST00000447609 SPRYD3Q8NCJ5 442 aa6.7□□□□□ -1.34
LMO3-209ENST00000447609 PRDM4Q9UKN5 801 aa6.7□□□□□ -1.34
LMO3-209ENST00000447609 ATP7BP35670 1465 aa6.7□□□□□ -1.34
LMO3-209ENST00000447609 IGHDP01880 384 aa6.69□□□□□ -1.34
LMO3-209ENST00000447609 MFAP1P55081 439 aaKnown RBP6.69□□□□□ -1.34
LMO3-209ENST00000447609 RIPK4P57078 832 aa6.69□□□□□ -1.34
LMO3-209ENST00000447609 FGD1P98174 961 aa6.69□□□□□ -1.34
LMO3-209ENST00000447609 MPRIPQ6WCQ1 1025 aa6.69□□□□□ -1.34
LMO3-209ENST00000447609 PDZRN3Q9UPQ7 1066 aa6.69□□□□□ -1.34
LMO3-209ENST00000447609 QRICH2Q9H0J4 1663 aa6.69□□□□□ -1.34
LMO3-209ENST00000447609 CCDC94Q9BW85 323 aaPredicted RBP6.69□□□□□ -1.34
LMO3-209ENST00000447609 CDCA7Q9BWT1 371 aaPredicted RBP6.69□□□□□ -1.34
LMO3-209ENST00000447609 DDX49Q9Y6V7 483 aaKnown RBP6.69□□□□□ -1.34
LMO3-209ENST00000447609 ERBB4Q15303 1308 aa6.69□□□□□ -1.34
LMO3-209ENST00000447609 PNPLA6Q8IY17 1366 aa6.69□□□□□ -1.34
LMO3-209ENST00000447609 NPC1L1Q9UHC9 1359 aa6.69□□□□□ -1.34
LMO3-209ENST00000447609 LETM1O95202 739 aaPredicted RBP6.69□□□□□ -1.34
LMO3-209ENST00000447609 SEC24BO95487 1268 aa6.69□□□□□ -1.34
LMO3-209ENST00000447609 EIF4A2Q14240 407 aaKnown RBP6.69□□□□□ -1.34
LMO3-209ENST00000447609 KLHL40Q2TBA0 621 aa6.69□□□□□ -1.34
LMO3-209ENST00000447609 CHMP4BQ9H444 224 aaKnown RBP6.69□□□□□ -1.34
LMO3-209ENST00000447609 NOL7Q9UMY1 257 aaKnown RBP6.69□□□□□ -1.34
LMO3-209ENST00000447609 KIF16BQ96L93 1317 aa6.69□□□□□ -1.34
LMO3-209ENST00000447609 APAF1O14727 1248 aa6.68□□□□□ -1.34
LMO3-209ENST00000447609 NUCB2P80303 420 aa6.68□□□□□ -1.34
LMO3-209ENST00000447609 RAB3GAP1Q15042 981 aa6.68□□□□□ -1.34
LMO3-209ENST00000447609 AMOTQ4VCS5 1084 aa6.68□□□□□ -1.34
LMO3-209ENST00000447609 SEPT12Q8IYM1 358 aa6.68□□□□□ -1.34
LMO3-209ENST00000447609 COG6Q9Y2V7 657 aa6.68□□□□□ -1.34
LMO3-209ENST00000447609 RBM25P49756 843 aaKnown RBP6.68□□□□□ -1.34
LMO3-209ENST00000447609 PDE4CQ08493 712 aa6.68□□□□□ -1.34
LMO3-209ENST00000447609 IFNL2Q8IZJ0 200 aa6.68□□□□□ -1.34
LMO3-209ENST00000447609 KLHL34Q8N239 644 aa6.68□□□□□ -1.34
LMO3-209ENST00000447609 TNPO1Q92973 898 aaKnown RBP6.68□□□□□ -1.34
LMO3-209ENST00000447609 GJD4Q96KN9 370 aaPredicted RBP6.68□□□□□ -1.34
LMO3-209ENST00000447609 KIAA1210Q9ULL0 1709 aa6.68□□□□□ -1.34
LMO3-209ENST00000447609 PTMAP06454 111 aaKnown RBP6.68□□□□□ -1.34
LMO3-209ENST00000447609 DMTNQ08495 405 aa6.68□□□□□ -1.34
LMO3-209ENST00000447609 FAM182BQ5T319 152 aa6.68□□□□□ -1.34
LMO3-209ENST00000447609 RUNDC1Q96C34 613 aa6.68□□□□□ -1.34
LMO3-209ENST00000447609 EYA1Q99502 592 aa6.68□□□□□ -1.34
LMO3-209ENST00000447609 TMOD3Q9NYL9 352 aa6.68□□□□□ -1.34
LMO3-209ENST00000447609 POLR3AO14802 1390 aaPredicted RBP6.67□□□□□ -1.34
LMO3-209ENST00000447609 CHD2O14647 1828 aaKnown RBP6.67□□□□□ -1.34
LMO3-209ENST00000447609 KIAA2012Q0VF49 1180 aa6.67□□□□□ -1.34
LMO3-209ENST00000447609 FTSJ3Q8IY81 847 aaKnown RBP6.67□□□□□ -1.34
LMO3-209ENST00000447609 PRIMPOLQ96LW4 560 aa6.67□□□□□ -1.34
LMO3-209ENST00000447609 BCL11BQ9C0K0 894 aaPredicted RBP6.67□□□□□ -1.34
LMO3-209ENST00000447609 CDC42BPGQ6DT37 1551 aa6.67□□□□□ -1.34
LMO3-209ENST00000447609 CT47B1P0C2W7 299 aaPredicted RBP6.67□□□□□ -1.34
LMO3-209ENST00000447609 ZNF445P59923 1031 aa6.67□□□□□ -1.34
LMO3-209ENST00000447609 DNTTIP2Q5QJE6 756 aaKnown RBP6.67□□□□□ -1.34
LMO3-209ENST00000447609 KRT27Q7Z3Y8 459 aa6.67□□□□□ -1.34
LMO3-209ENST00000447609 ZKSCAN5Q9Y2L8 839 aa6.67□□□□□ -1.34
LMO3-209ENST00000447609 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.67□□□□□ -1.34
LMO3-209ENST00000447609 BCAR3O75815 825 aa6.66□□□□□ -1.34
LMO3-209ENST00000447609 CHAF1AQ13111 956 aaPredicted RBP6.66□□□□□ -1.34
LMO3-209ENST00000447609 NBPF6Q5VWK0 638 aa6.66□□□□□ -1.34
LMO3-209ENST00000447609 NBPF4Q96M43 638 aa6.66□□□□□ -1.34
LMO3-209ENST00000447609 WDR17Q8IZU2 1322 aa6.66□□□□□ -1.34
LMO3-209ENST00000447609 ELL2O00472 640 aaPredicted RBP6.66□□□□□ -1.34
LMO3-209ENST00000447609 PTCD1O75127 700 aaKnown RBP6.66□□□□□ -1.34
LMO3-209ENST00000447609 FCHSD2O94868 740 aa6.66□□□□□ -1.34
LMO3-209ENST00000447609 CDK11BP21127 795 aaKnown RBP6.66□□□□□ -1.34
LMO3-209ENST00000447609 BAG6P46379 1132 aa6.66□□□□□ -1.34
LMO3-209ENST00000447609 AEBP1Q8IUX7 1158 aa6.66□□□□□ -1.34
LMO3-209ENST00000447609 SYAP1Q96A49 352 aaPredicted RBP6.66□□□□□ -1.34
LMO3-209ENST00000447609 CARD10Q9BWT7 1032 aa6.66□□□□□ -1.34
LMO3-209ENST00000447609 EIF2S2P20042 333 aaKnown RBP6.66□□□□□ -1.34
LMO3-209ENST00000447609 TSPYL4Q9UJ04 414 aa6.66□□□□□ -1.34
LMO3-209ENST00000447609 NRXN3Q9Y4C0 1643 aa6.65□□□□□ -1.34
LMO3-209ENST00000447609 PANK1Q8TE04 598 aa6.65□□□□□ -1.34
LMO3-209ENST00000447609 IQSEC2Q5JU85 1478 aa6.65□□□□□ -1.34
LMO3-209ENST00000447609 GNAT3A8MTJ3 354 aa6.65□□□□□ -1.35
LMO3-209ENST00000447609 K7ELQ4 463 aaPredicted RBP6.65□□□□□ -1.35
LMO3-209ENST00000447609 PHF14O94880 888 aa6.65□□□□□ -1.35
LMO3-209ENST00000447609 APBA3O96018 575 aa6.65□□□□□ -1.35
LMO3-209ENST00000447609 GTF2E1P29083 439 aaPredicted RBP6.65□□□□□ -1.35
LMO3-209ENST00000447609 CLEC17AQ6ZS10 378 aa6.65□□□□□ -1.35
LMO3-209ENST00000447609 CHMP4AQ9BY43 222 aa6.65□□□□□ -1.35
LMO3-209ENST00000447609 AXIN2Q9Y2T1 843 aa6.65□□□□□ -1.35
LMO3-209ENST00000447609 LTBP4Q8N2S1 1624 aa6.65□□□□□ -1.35
LMO3-209ENST00000447609 ERBB3P21860 1342 aa6.65□□□□□ -1.35
LMO3-209ENST00000447609 VPS72Q15906 364 aa6.65□□□□□ -1.35
LMO3-209ENST00000447609 ZKSCAN2Q63HK3 967 aa6.65□□□□□ -1.35
LMO3-209ENST00000447609 NECTIN2Q92692 538 aa6.65□□□□□ -1.35
LMO3-209ENST00000447609 STK31Q9BXU1 1019 aa6.65□□□□□ -1.35
LMO3-209ENST00000447609 DDX19BQ9UMR2 479 aa6.65□□□□□ -1.35
LMO3-209ENST00000447609 ARHGEF28Q8N1W1 1705 aaKnown RBP6.64□□□□□ -1.35
LMO3-209ENST00000447609 MBD3O95983 291 aa6.64□□□□□ -1.35
LMO3-209ENST00000447609 WDR63Q8IWG1 891 aa6.64□□□□□ -1.35
LMO3-209ENST00000447609 NBPF14Q5TI25 921 aa6.64□□□□□ -1.35
LMO3-209ENST00000447609 FAM196AQ6ZSG2 479 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms