RNA–Protein interactions for RNA: ENST00000444664.5

SHC1-209, Transcript of SHC adaptor protein 1, humanhuman

TSL 5

Gene SHC1, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-209ENST00000444664 NFATC2IPQ8NCF5 419 aa22.33■■□□□ 1.17
SHC1-209ENST00000444664 DLG5Q8TDM6 1919 aa22.33■■□□□ 1.16
SHC1-209ENST00000444664 QSER1Q2KHR3 1735 aa22.33■■□□□ 1.16
SHC1-209ENST00000444664 AKT1S1Q96B36 256 aa22.32■■□□□ 1.16
SHC1-209ENST00000444664 PDGFDQ9GZP0 370 aaPredicted RBP22.32■■□□□ 1.16
SHC1-209ENST00000444664 LRP5O75197 1615 aa22.32■■□□□ 1.16
SHC1-209ENST00000444664 SLC52A2Q9HAB3 445 aa22.31■■□□□ 1.16
SHC1-209ENST00000444664 SIPA1L3O60292 1781 aaPredicted RBP22.31■■□□□ 1.16
SHC1-209ENST00000444664 LOC102724428A0A0B4J2F2 783 aa22.31■■□□□ 1.16
SHC1-209ENST00000444664 GNAT3A8MTJ3 354 aa22.31■■□□□ 1.16
SHC1-209ENST00000444664 SIK1P57059 783 aa22.31■■□□□ 1.16
SHC1-209ENST00000444664 C4BP0C0L5 1744 aa22.3■■□□□ 1.16
SHC1-209ENST00000444664 IL17REQ8NFR9 667 aa22.29■■□□□ 1.16
SHC1-209ENST00000444664 PLEKHF1Q96S99 279 aa22.29■■□□□ 1.16
SHC1-209ENST00000444664 ZNF831Q5JPB2 1677 aa22.28■■□□□ 1.16
SHC1-209ENST00000444664 RBM42Q9BTD8 480 aaKnown RBP22.28■■□□□ 1.16
SHC1-209ENST00000444664 SLC4A9Q96Q91 983 aa22.27■■□□□ 1.16
SHC1-209ENST00000444664 COL5A3P25940 1745 aaPredicted RBP22.26■■□□□ 1.15
SHC1-209ENST00000444664 ATP6V1AP38606 617 aa22.26■■□□□ 1.15
SHC1-209ENST00000444664 ITPK1Q13572 414 aa22.26■■□□□ 1.15
SHC1-209ENST00000444664 LINC00116Q8NCU8 138 aa22.26■■□□□ 1.15
SHC1-209ENST00000444664 TFCP2L1Q9NZI6 479 aa22.26■■□□□ 1.15
SHC1-209ENST00000444664 UBR3Q6ZT12 1888 aa22.25■■□□□ 1.15
SHC1-209ENST00000444664 PTCD1O75127 700 aaKnown RBP22.25■■□□□ 1.15
SHC1-209ENST00000444664 NEFMP07197 916 aa22.25■■□□□ 1.15
SHC1-209ENST00000444664 TJP1Q07157 1748 aa22.25■■□□□ 1.15
SHC1-209ENST00000444664 CEMIPQ8WUJ3 1361 aa22.24■■□□□ 1.15
SHC1-209ENST00000444664 UBR2Q8IWV8 1755 aa22.24■■□□□ 1.15
SHC1-209ENST00000444664 PNPLA7Q6ZV29 1317 aa22.24■■□□□ 1.15
SHC1-209ENST00000444664 SLC39A6Q13433 755 aa22.24■■□□□ 1.15
SHC1-209ENST00000444664 MAPK8IP3Q9UPT6 1336 aa22.23■■□□□ 1.15
SHC1-209ENST00000444664 ZBTB7AO95365 584 aa22.23■■□□□ 1.15
SHC1-209ENST00000444664 TEFQ10587 303 aa22.23■■□□□ 1.15
SHC1-209ENST00000444664 WDR43Q15061 677 aaKnown RBP eCLIP22.23■■□□□ 1.15
SHC1-209ENST00000444664 MCM10Q7L590 875 aa22.23■■□□□ 1.15
SHC1-209ENST00000444664 PNNQ9H307 717 aaKnown RBP22.23■■□□□ 1.15
SHC1-209ENST00000444664 KCPQ6ZWJ8 1503 aa22.22■■□□□ 1.15
SHC1-209ENST00000444664 CICQ96RK0 1608 aaPredicted RBP22.22■■□□□ 1.15
SHC1-209ENST00000444664 DCTN1Q14203 1278 aa22.22■■□□□ 1.15
SHC1-209ENST00000444664 CCDC184Q52MB2 194 aa22.22■■□□□ 1.15
SHC1-209ENST00000444664 ANP32CO43423 234 aa22.21■■□□□ 1.15
SHC1-209ENST00000444664 NFE2L2Q16236 605 aa22.21■■□□□ 1.15
SHC1-209ENST00000444664 CCDC146Q8IYE0 955 aa22.21■■□□□ 1.15
SHC1-209ENST00000444664 RTF1Q92541 710 aaKnown RBP22.21■■□□□ 1.15
SHC1-209ENST00000444664 AK7Q96M32 723 aa22.21■■□□□ 1.15
SHC1-209ENST00000444664 MYH14Q7Z406 1995 aaKnown RBP22.2■■□□□ 1.14
SHC1-209ENST00000444664 AMIGO3Q86WK7 504 aa22.2■■□□□ 1.14
SHC1-209ENST00000444664 SPON1Q9HCB6 807 aa22.2■■□□□ 1.14
SHC1-209ENST00000444664 ADAMTS8Q9UP79 889 aa22.2■■□□□ 1.14
SHC1-209ENST00000444664 SMIM5Q71RC9 77 aa22.19■■□□□ 1.14
SHC1-209ENST00000444664 ATF5Q9Y2D1 282 aaPredicted RBP22.19■■□□□ 1.14
SHC1-209ENST00000444664 HMGB2P26583 209 aaKnown RBP22.18■■□□□ 1.14
SHC1-209ENST00000444664 HTATSF1O43719 755 aaKnown RBP22.17■■□□□ 1.14
SHC1-209ENST00000444664 COL23A1Q86Y22 540 aaPredicted RBP22.17■■□□□ 1.14
SHC1-209ENST00000444664 MTFR1LQ9H019 292 aa22.16■■□□□ 1.14
SHC1-209ENST00000444664 COL24A1Q17RW2 1714 aa22.16■■□□□ 1.14
SHC1-209ENST00000444664 GNPATO15228 680 aa22.15■■□□□ 1.14
SHC1-209ENST00000444664 MSH5O43196 834 aa22.15■■□□□ 1.14
SHC1-209ENST00000444664 PHF14O94880 888 aa22.15■■□□□ 1.14
SHC1-209ENST00000444664 ZNF790Q6PG37 636 aa22.14■■□□□ 1.14
SHC1-209ENST00000444664 DNAJC10Q8IXB1 793 aa22.14■■□□□ 1.14
SHC1-209ENST00000444664 TTC5Q8N0Z6 440 aa22.14■■□□□ 1.14
SHC1-209ENST00000444664 THUMPD2Q9BTF0 503 aaKnown RBP22.14■■□□□ 1.14
SHC1-209ENST00000444664 CNTNAP4Q9C0A0 1308 aa22.14■■□□□ 1.13
SHC1-209ENST00000444664 BTBD11A6QL63 1104 aa22.13■■□□□ 1.13
SHC1-209ENST00000444664 KCNQ3O43525 872 aa22.13■■□□□ 1.13
SHC1-209ENST00000444664 TMPOP42166 694 aaKnown RBP22.13■■□□□ 1.13
SHC1-209ENST00000444664 PTGER2P43116 358 aa22.13■■□□□ 1.13
SHC1-209ENST00000444664 RUNDC1Q96C34 613 aa22.13■■□□□ 1.13
SHC1-209ENST00000444664 RRP7AQ9Y3A4 280 aaKnown RBP22.13■■□□□ 1.13
SHC1-209ENST00000444664 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.12■■□□□ 1.13
SHC1-209ENST00000444664 RIPK4P57078 832 aa22.12■■□□□ 1.13
SHC1-209ENST00000444664 SLC16A10Q8TF71 515 aa22.12■■□□□ 1.13
SHC1-209ENST00000444664 ZNF496Q96IT1 587 aaPredicted RBP22.12■■□□□ 1.13
SHC1-209ENST00000444664 SSFA2P28290 1259 aa22.11■■□□□ 1.13
SHC1-209ENST00000444664 CRKLP46109 303 aaKnown RBP22.11■■□□□ 1.13
SHC1-209ENST00000444664 FLAD1Q8NFF5 587 aa22.11■■□□□ 1.13
SHC1-209ENST00000444664 KDM3BQ7LBC6 1761 aa22.11■■□□□ 1.13
SHC1-209ENST00000444664 C4AP0C0L4 1744 aa22.11■■□□□ 1.13
SHC1-209ENST00000444664 RC3H1Q5TC82 1133 aaKnown RBP22.1■■□□□ 1.13
SHC1-209ENST00000444664 SGIP1Q9BQI5 828 aa22.1■■□□□ 1.13
SHC1-209ENST00000444664 MRS2Q9HD23 443 aa22.1■■□□□ 1.13
SHC1-209ENST00000444664 NEUROD2Q15784 382 aa22.09■■□□□ 1.13
SHC1-209ENST00000444664 VSIG10Q8N0Z9 540 aa22.09■■□□□ 1.13
SHC1-209ENST00000444664 HEG1Q9ULI3 1381 aa22.09■■□□□ 1.13
SHC1-209ENST00000444664 CYP19A1P11511 503 aaPredicted RBP22.08■■□□□ 1.13
SHC1-209ENST00000444664 TAF7Q15545 349 aaPredicted RBP22.08■■□□□ 1.13
SHC1-209ENST00000444664 MIS18AQ9NYP9 233 aa22.08■■□□□ 1.13
SHC1-209ENST00000444664 PPP1R1BQ9UD71 204 aaPredicted RBP22.08■■□□□ 1.13
SHC1-209ENST00000444664 RTCBQ9Y3I0 505 aaKnown RBP22.08■■□□□ 1.13
SHC1-209ENST00000444664 RPS6KA4O75676 772 aa22.07■■□□□ 1.12
SHC1-209ENST00000444664 MSL1Q68DK7 614 aa22.07■■□□□ 1.12
SHC1-209ENST00000444664 INTS5Q6P9B9 1019 aaKnown RBP22.07■■□□□ 1.12
SHC1-209ENST00000444664 FMNL2Q96PY5 1086 aa22.07■■□□□ 1.12
SHC1-209ENST00000444664 CCDC87Q9NVE4 849 aa22.06■■□□□ 1.12
SHC1-209ENST00000444664 LMOD3Q0VAK6 560 aa22.06■■□□□ 1.12
SHC1-209ENST00000444664 PNISRQ8TF01 805 aaKnown RBP22.06■■□□□ 1.12
SHC1-209ENST00000444664 TRAPPC3LQ5T215 181 aa22.05■■□□□ 1.12
SHC1-209ENST00000444664 APAF1O14727 1248 aa22.04■■□□□ 1.12
SHC1-209ENST00000444664 ARHGEF1Q92888 912 aaKnown RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms