RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 IL17REQ8NFR9 667 aa3.57□□□□□ -1.84
LINC00393-201ENST00000443621 TSR2Q969E8 191 aaKnown RBP3.57□□□□□ -1.84
LINC00393-201ENST00000443621 PCDH11XQ9BZA7 1347 aa3.57□□□□□ -1.84
LINC00393-201ENST00000443621 PCDH11YQ9BZA8 1340 aa3.57□□□□□ -1.84
LINC00393-201ENST00000443621 SENP3Q9H4L4 574 aaPredicted RBP3.57□□□□□ -1.84
LINC00393-201ENST00000443621 ZNF335Q9H4Z2 1342 aaPredicted RBP3.57□□□□□ -1.84
LINC00393-201ENST00000443621 DBF4Q9UBU7 674 aaPredicted RBP3.57□□□□□ -1.84
LINC00393-201ENST00000443621 NOB1Q9ULX3 412 aaKnown RBP3.57□□□□□ -1.84
LINC00393-201ENST00000443621 ROBO1Q9Y6N7 1651 aa3.57□□□□□ -1.84
LINC00393-201ENST00000443621 LAMB4A4D0S4 1761 aa3.56□□□□□ -1.84
LINC00393-201ENST00000443621 UBR2Q8IWV8 1755 aa3.56□□□□□ -1.84
LINC00393-201ENST00000443621 COL16A1Q07092 1604 aaPredicted RBP3.56□□□□□ -1.84
LINC00393-201ENST00000443621 BCL9O00512 1426 aa3.56□□□□□ -1.84
LINC00393-201ENST00000443621 HMMRO75330 724 aa3.56□□□□□ -1.84
LINC00393-201ENST00000443621 ALDH1L1O75891 902 aa3.56□□□□□ -1.84
LINC00393-201ENST00000443621 IL2RBP14784 551 aa3.56□□□□□ -1.84
LINC00393-201ENST00000443621 PHKG2P15735 406 aa3.56□□□□□ -1.84
LINC00393-201ENST00000443621 EIF4A1P60842 406 aaKnown RBP3.56□□□□□ -1.84
LINC00393-201ENST00000443621 PLCB2Q00722 1185 aa3.56□□□□□ -1.84
LINC00393-201ENST00000443621 TPRNQ4KMQ1 711 aa3.56□□□□□ -1.84
LINC00393-201ENST00000443621 C20orf194Q5TEA3 1177 aa3.56□□□□□ -1.84
LINC00393-201ENST00000443621 B4GALNT3Q6L9W6 998 aa3.56□□□□□ -1.84
LINC00393-201ENST00000443621 ZNF530Q6P9A1 599 aaPredicted RBP3.56□□□□□ -1.84
LINC00393-201ENST00000443621 FRAT1Q92837 279 aaPredicted RBP3.56□□□□□ -1.84
LINC00393-201ENST00000443621 SLC52A2Q9HAB3 445 aa3.56□□□□□ -1.84
LINC00393-201ENST00000443621 PRDM11Q9NQV5 511 aa3.56□□□□□ -1.84
LINC00393-201ENST00000443621 HYPKQ9NX55 129 aa3.56□□□□□ -1.84
LINC00393-201ENST00000443621 AXIN2Q9Y2T1 843 aa3.56□□□□□ -1.84
LINC00393-201ENST00000443621 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.56□□□□□ -1.84
LINC00393-201ENST00000443621 PAPPAQ13219 1627 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 DISP2A7MBM2 1401 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 UTYO14607 1347 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 SPATA31A6Q5VVP1 1343 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 FAM83GA6ND36 823 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 BTBD11A6QL63 1104 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 PLIN1O60240 522 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 GIGYF1O75420 1035 aaPredicted RBP3.55□□□□□ -1.84
LINC00393-201ENST00000443621 DDX58O95786 925 aaKnown RBP3.55□□□□□ -1.84
LINC00393-201ENST00000443621 SLC4A2P04920 1241 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 MTX1Q13505 466 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 FAM161AQ3B820 660 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 HSP90AB4PQ58FF6 505 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 ZNF790Q6PG37 636 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 BARGINQ6ZT62 677 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 MCM10Q7L590 875 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 TMEM57Q8N5G2 664 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 TSPYL6Q8N831 410 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 ANKRD44Q8N8A2 993 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 ZCRB1Q8TBF4 217 aaKnown RBP3.55□□□□□ -1.84
LINC00393-201ENST00000443621 BACH2Q9BYV9 841 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 DCTPP1Q9H773 170 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 DDX21Q9NR30 783 aaKnown RBP eCLIP3.55□□□□□ -1.84
LINC00393-201ENST00000443621 COG6Q9Y2V7 657 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 WNK3Q9BYP7 1800 aa3.55□□□□□ -1.84
LINC00393-201ENST00000443621 SLIT2O94813 1529 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 TNS2Q63HR2 1409 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 PHLPP1O60346 1717 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 NRAPQ86VF7 1730 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 SHANK3Q9BYB0 1731 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 RAB11FIP3O75154 756 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 GNAI2P04899 355 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 SNRPA1P09661 255 aaKnown RBP3.54□□□□□ -1.84
LINC00393-201ENST00000443621 RLBP1P12271 317 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 ZC3H6P61129 1189 aaKnown RBP3.54□□□□□ -1.84
LINC00393-201ENST00000443621 IRX6P78412 446 aaPredicted RBP3.54□□□□□ -1.84
LINC00393-201ENST00000443621 NUCB1Q02818 461 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 FLIIQ13045 1269 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 TRIM28Q13263 835 aaKnown RBP3.54□□□□□ -1.84
LINC00393-201ENST00000443621 BMP2KLQ5H9B9 411 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 HDGFL1Q5TGJ6 251 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 NUTM2GQ5VZR2 741 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 LMOD2Q6P5Q4 547 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 KSR2Q6VAB6 950 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 ITPRIPQ8IWB1 547 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 PANK1Q8TE04 598 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 RBM33Q96EV2 1170 aaKnown RBP3.54□□□□□ -1.84
LINC00393-201ENST00000443621 FMNL2Q96PY5 1086 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 SRCIN1Q9C0H9 1055 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 OSBPL3Q9H4L5 887 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 TSHZ2Q9NRE2 1034 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 ATG3Q9NT62 314 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 NLRP2Q9NX02 1062 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 FBXO3Q9UK99 471 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 LAS1LQ9Y4W2 734 aaKnown RBP3.54□□□□□ -1.84
LINC00393-201ENST00000443621 PCDHB15Q9Y5E8 787 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 MEGF6O75095 1541 aa3.54□□□□□ -1.84
LINC00393-201ENST00000443621 KDM6AO15550 1401 aaPredicted RBP3.53□□□□□ -1.84
LINC00393-201ENST00000443621 JCADQ9P266 1359 aa3.53□□□□□ -1.84
LINC00393-201ENST00000443621 AOX1Q06278 1338 aa3.53□□□□□ -1.84
LINC00393-201ENST00000443621 SOX12O15370 315 aa3.53□□□□□ -1.84
LINC00393-201ENST00000443621 CYP27B1O15528 508 aa3.53□□□□□ -1.84
LINC00393-201ENST00000443621 CSB-PGBD3P0DP91 1061 aa3.53□□□□□ -1.84
LINC00393-201ENST00000443621 PDE4AP27815 886 aa3.53□□□□□ -1.84
LINC00393-201ENST00000443621 EVA1CP58658 441 aa3.53□□□□□ -1.84
LINC00393-201ENST00000443621 DCTN1Q14203 1278 aa3.53□□□□□ -1.84
LINC00393-201ENST00000443621 LARP1Q6PKG0 1096 aaKnown RBP3.53□□□□□ -1.84
LINC00393-201ENST00000443621 TOM1L2Q6ZVM7 507 aa3.53□□□□□ -1.84
LINC00393-201ENST00000443621 CHD1LQ86WJ1 897 aa3.53□□□□□ -1.84
LINC00393-201ENST00000443621 TTC5Q8N0Z6 440 aa3.53□□□□□ -1.84
LINC00393-201ENST00000443621 FNBP4Q8N3X1 1017 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms