RNA–Protein interactions for RNA: ENST00000442942.6

UBXN11-210, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-210ENST00000442942 ZNF831Q5JPB2 1677 aa18.23■□□□□ 0.51
UBXN11-210ENST00000442942 RNMTO43148 476 aaKnown RBP18.23■□□□□ 0.51
UBXN11-210ENST00000442942 ZNF827Q17R98 1081 aa18.23■□□□□ 0.51
UBXN11-210ENST00000442942 ATG3Q9NT62 314 aa18.23■□□□□ 0.51
UBXN11-210ENST00000442942 SIPA1L3O60292 1781 aaPredicted RBP18.22■□□□□ 0.51
UBXN11-210ENST00000442942 NFATC2IPQ8NCF5 419 aa18.22■□□□□ 0.51
UBXN11-210ENST00000442942 AKT1S1Q96B36 256 aa18.22■□□□□ 0.51
UBXN11-210ENST00000442942 LOC102724428A0A0B4J2F2 783 aa18.21■□□□□ 0.51
UBXN11-210ENST00000442942 GNAT3A8MTJ3 354 aa18.21■□□□□ 0.51
UBXN11-210ENST00000442942 SIK1P57059 783 aa18.21■□□□□ 0.51
UBXN11-210ENST00000442942 SLC52A2Q9HAB3 445 aa18.21■□□□□ 0.51
UBXN11-210ENST00000442942 C4BP0C0L5 1744 aa18.2■□□□□ 0.5
UBXN11-210ENST00000442942 PDGFDQ9GZP0 370 aaPredicted RBP18.2■□□□□ 0.5
UBXN11-210ENST00000442942 UBR3Q6ZT12 1888 aa18.2■□□□□ 0.5
UBXN11-210ENST00000442942 PLEKHF1Q96S99 279 aa18.19■□□□□ 0.5
UBXN11-210ENST00000442942 COL5A3P25940 1745 aaPredicted RBP18.18■□□□□ 0.5
UBXN11-210ENST00000442942 IL17REQ8NFR9 667 aa18.18■□□□□ 0.5
UBXN11-210ENST00000442942 UBR2Q8IWV8 1755 aa18.17■□□□□ 0.5
UBXN11-210ENST00000442942 MYH14Q7Z406 1995 aaKnown RBP18.17■□□□□ 0.5
UBXN11-210ENST00000442942 HMGB2P26583 209 aaKnown RBP18.17■□□□□ 0.5
UBXN11-210ENST00000442942 CEMIPQ8WUJ3 1361 aa18.17■□□□□ 0.5
UBXN11-210ENST00000442942 CICQ96RK0 1608 aaPredicted RBP18.16■□□□□ 0.5
UBXN11-210ENST00000442942 NEFMP07197 916 aa18.16■□□□□ 0.5
UBXN11-210ENST00000442942 SLC4A9Q96Q91 983 aa18.16■□□□□ 0.5
UBXN11-210ENST00000442942 RBM42Q9BTD8 480 aaKnown RBP18.16■□□□□ 0.5
UBXN11-210ENST00000442942 PNNQ9H307 717 aaKnown RBP18.16■□□□□ 0.5
UBXN11-210ENST00000442942 TFCP2L1Q9NZI6 479 aa18.16■□□□□ 0.5
UBXN11-210ENST00000442942 TJP1Q07157 1748 aa18.15■□□□□ 0.5
UBXN11-210ENST00000442942 ATP6V1AP38606 617 aa18.15■□□□□ 0.5
UBXN11-210ENST00000442942 ITPK1Q13572 414 aa18.15■□□□□ 0.5
UBXN11-210ENST00000442942 LINC00116Q8NCU8 138 aa18.15■□□□□ 0.5
UBXN11-210ENST00000442942 PNPLA7Q6ZV29 1317 aa18.15■□□□□ 0.5
UBXN11-210ENST00000442942 PTCD1O75127 700 aaKnown RBP18.14■□□□□ 0.49
UBXN11-210ENST00000442942 TEFQ10587 303 aa18.14■□□□□ 0.49
UBXN11-210ENST00000442942 KCPQ6ZWJ8 1503 aa18.13■□□□□ 0.49
UBXN11-210ENST00000442942 SLC39A6Q13433 755 aa18.13■□□□□ 0.49
UBXN11-210ENST00000442942 WDR43Q15061 677 aaKnown RBP eCLIP18.13■□□□□ 0.49
UBXN11-210ENST00000442942 RTF1Q92541 710 aaKnown RBP18.13■□□□□ 0.49
UBXN11-210ENST00000442942 COL24A1Q17RW2 1714 aa18.12■□□□□ 0.49
UBXN11-210ENST00000442942 HTATSF1O43719 755 aaKnown RBP18.12■□□□□ 0.49
UBXN11-210ENST00000442942 ZBTB7AO95365 584 aa18.12■□□□□ 0.49
UBXN11-210ENST00000442942 AK7Q96M32 723 aa18.12■□□□□ 0.49
UBXN11-210ENST00000442942 SPON1Q9HCB6 807 aa18.12■□□□□ 0.49
UBXN11-210ENST00000442942 MAPK8IP3Q9UPT6 1336 aa18.12■□□□□ 0.49
UBXN11-210ENST00000442942 ANP32CO43423 234 aa18.11■□□□□ 0.49
UBXN11-210ENST00000442942 NFE2L2Q16236 605 aa18.11■□□□□ 0.49
UBXN11-210ENST00000442942 MCM10Q7L590 875 aa18.11■□□□□ 0.49
UBXN11-210ENST00000442942 DCTN1Q14203 1278 aa18.1■□□□□ 0.49
UBXN11-210ENST00000442942 MTFR1LQ9H019 292 aa18.1■□□□□ 0.49
UBXN11-210ENST00000442942 AMIGO3Q86WK7 504 aa18.09■□□□□ 0.49
UBXN11-210ENST00000442942 COL23A1Q86Y22 540 aaPredicted RBP18.09■□□□□ 0.49
UBXN11-210ENST00000442942 ADAMTS8Q9UP79 889 aa18.09■□□□□ 0.49
UBXN11-210ENST00000442942 CNTNAP4Q9C0A0 1308 aa18.08■□□□□ 0.49
UBXN11-210ENST00000442942 CCDC184Q52MB2 194 aa18.08■□□□□ 0.48
UBXN11-210ENST00000442942 SLC16A10Q8TF71 515 aa18.08■□□□□ 0.48
UBXN11-210ENST00000442942 ATF5Q9Y2D1 282 aaPredicted RBP18.08■□□□□ 0.48
UBXN11-210ENST00000442942 GNPATO15228 680 aa18.07■□□□□ 0.48
UBXN11-210ENST00000442942 PTGER2P43116 358 aa18.07■□□□□ 0.48
UBXN11-210ENST00000442942 RC3H1Q5TC82 1133 aaKnown RBP18.07■□□□□ 0.48
UBXN11-210ENST00000442942 ZNF790Q6PG37 636 aa18.07■□□□□ 0.48
UBXN11-210ENST00000442942 CCDC146Q8IYE0 955 aa18.07■□□□□ 0.48
UBXN11-210ENST00000442942 TTC5Q8N0Z6 440 aa18.07■□□□□ 0.48
UBXN11-210ENST00000442942 FLAD1Q8NFF5 587 aa18.07■□□□□ 0.48
UBXN11-210ENST00000442942 BTBD11A6QL63 1104 aa18.06■□□□□ 0.48
UBXN11-210ENST00000442942 SSFA2P28290 1259 aa18.06■□□□□ 0.48
UBXN11-210ENST00000442942 TMPOP42166 694 aaKnown RBP18.06■□□□□ 0.48
UBXN11-210ENST00000442942 SMIM5Q71RC9 77 aa18.06■□□□□ 0.48
UBXN11-210ENST00000442942 RUNDC1Q96C34 613 aa18.06■□□□□ 0.48
UBXN11-210ENST00000442942 KDM3BQ7LBC6 1761 aa18.06■□□□□ 0.48
UBXN11-210ENST00000442942 C4AP0C0L4 1744 aa18.06■□□□□ 0.48
UBXN11-210ENST00000442942 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.05■□□□□ 0.48
UBXN11-210ENST00000442942 MSH5O43196 834 aa18.05■□□□□ 0.48
UBXN11-210ENST00000442942 PHF14O94880 888 aa18.05■□□□□ 0.48
UBXN11-210ENST00000442942 DNAJC10Q8IXB1 793 aa18.05■□□□□ 0.48
UBXN11-210ENST00000442942 VSIG10Q8N0Z9 540 aa18.05■□□□□ 0.48
UBXN11-210ENST00000442942 SGIP1Q9BQI5 828 aa18.05■□□□□ 0.48
UBXN11-210ENST00000442942 CRKLP46109 303 aaKnown RBP18.04■□□□□ 0.48
UBXN11-210ENST00000442942 RIPK4P57078 832 aa18.04■□□□□ 0.48
UBXN11-210ENST00000442942 ZNF496Q96IT1 587 aaPredicted RBP18.04■□□□□ 0.48
UBXN11-210ENST00000442942 KCNQ3O43525 872 aa18.03■□□□□ 0.48
UBXN11-210ENST00000442942 TAF7Q15545 349 aaPredicted RBP18.03■□□□□ 0.48
UBXN11-210ENST00000442942 THUMPD2Q9BTF0 503 aaKnown RBP18.03■□□□□ 0.48
UBXN11-210ENST00000442942 RTCBQ9Y3I0 505 aaKnown RBP18.03■□□□□ 0.48
UBXN11-210ENST00000442942 HEG1Q9ULI3 1381 aa18.03■□□□□ 0.48
UBXN11-210ENST00000442942 RPS6KA4O75676 772 aa18.02■□□□□ 0.48
UBXN11-210ENST00000442942 CYP19A1P11511 503 aaPredicted RBP18.02■□□□□ 0.48
UBXN11-210ENST00000442942 FMNL2Q96PY5 1086 aa18.02■□□□□ 0.48
UBXN11-210ENST00000442942 PPP1R1BQ9UD71 204 aaPredicted RBP18.02■□□□□ 0.48
UBXN11-210ENST00000442942 LMOD3Q0VAK6 560 aa18.01■□□□□ 0.47
UBXN11-210ENST00000442942 INTS5Q6P9B9 1019 aaKnown RBP18.01■□□□□ 0.47
UBXN11-210ENST00000442942 MRS2Q9HD23 443 aa18.01■□□□□ 0.47
UBXN11-210ENST00000442942 RRP7AQ9Y3A4 280 aaKnown RBP18.01■□□□□ 0.47
UBXN11-210ENST00000442942 ADRA2BP18089 450 aa18■□□□□ 0.47
UBXN11-210ENST00000442942 CCDC87Q9NVE4 849 aa18■□□□□ 0.47
UBXN11-210ENST00000442942 NEUROD2Q15784 382 aa17.99■□□□□ 0.47
UBXN11-210ENST00000442942 TRAPPC3LQ5T215 181 aa17.99■□□□□ 0.47
UBXN11-210ENST00000442942 MSL1Q68DK7 614 aa17.99■□□□□ 0.47
UBXN11-210ENST00000442942 PNISRQ8TF01 805 aaKnown RBP17.99■□□□□ 0.47
UBXN11-210ENST00000442942 MIS18AQ9NYP9 233 aa17.99■□□□□ 0.47
UBXN11-210ENST00000442942 ARHGEF1Q92888 912 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms