RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 HTATSF1O43719 755 aaKnown RBP19.95■□□□□ 0.78
CSNK1E-210ENST00000442216 WDR43Q15061 677 aaKnown RBP eCLIP19.95■□□□□ 0.78
CSNK1E-210ENST00000442216 ATG3Q9NT62 314 aa19.95■□□□□ 0.78
CSNK1E-210ENST00000442216 STK32BQ9NY57 414 aa19.95■□□□□ 0.78
CSNK1E-210ENST00000442216 ASAP1Q9ULH1 1129 aa19.95■□□□□ 0.78
CSNK1E-210ENST00000442216 R3HDM1Q15032 1099 aaKnown RBP19.94■□□□□ 0.78
CSNK1E-210ENST00000442216 SLC15A2Q16348 729 aa19.94■□□□□ 0.78
CSNK1E-210ENST00000442216 ANO8Q9HCE9 1232 aaPredicted RBP19.94■□□□□ 0.78
CSNK1E-210ENST00000442216 CEMIPQ8WUJ3 1361 aa19.94■□□□□ 0.78
CSNK1E-210ENST00000442216 IL17REQ8NFR9 667 aa19.93■□□□□ 0.78
CSNK1E-210ENST00000442216 CICQ96RK0 1608 aaPredicted RBP19.93■□□□□ 0.78
CSNK1E-210ENST00000442216 MAPK8IP3Q9UPT6 1336 aa19.93■□□□□ 0.78
CSNK1E-210ENST00000442216 LOC102724428A0A0B4J2F2 783 aa19.92■□□□□ 0.78
CSNK1E-210ENST00000442216 PSDA5PKW4 1024 aaPredicted RBP19.92■□□□□ 0.78
CSNK1E-210ENST00000442216 SIK1P57059 783 aa19.92■□□□□ 0.78
CSNK1E-210ENST00000442216 CASZ1Q86V15 1759 aa19.91■□□□□ 0.78
CSNK1E-210ENST00000442216 UBR2Q8IWV8 1755 aa19.91■□□□□ 0.78
CSNK1E-210ENST00000442216 TUBGCP6Q96RT7 1819 aa19.91■□□□□ 0.78
CSNK1E-210ENST00000442216 RTF1Q92541 710 aaKnown RBP19.91■□□□□ 0.78
CSNK1E-210ENST00000442216 AKT1S1Q96B36 256 aa19.91■□□□□ 0.78
CSNK1E-210ENST00000442216 C4BP0C0L5 1744 aa19.9■□□□□ 0.78
CSNK1E-210ENST00000442216 TEFQ10587 303 aa19.9■□□□□ 0.78
CSNK1E-210ENST00000442216 NFE2L2Q16236 605 aa19.9■□□□□ 0.78
CSNK1E-210ENST00000442216 COL5A3P25940 1745 aaPredicted RBP19.9■□□□□ 0.78
CSNK1E-210ENST00000442216 KCNQ4P56696 695 aa19.89■□□□□ 0.77
CSNK1E-210ENST00000442216 ADAMTS8Q9UP79 889 aa19.89■□□□□ 0.77
CSNK1E-210ENST00000442216 ATP6V1AP38606 617 aa19.88■□□□□ 0.77
CSNK1E-210ENST00000442216 RUNDC1Q96C34 613 aa19.88■□□□□ 0.77
CSNK1E-210ENST00000442216 LRP5O75197 1615 aa19.87■□□□□ 0.77
CSNK1E-210ENST00000442216 ZNF827Q17R98 1081 aa19.87■□□□□ 0.77
CSNK1E-210ENST00000442216 UBR3Q6ZT12 1888 aa19.87■□□□□ 0.77
CSNK1E-210ENST00000442216 RBM42Q9BTD8 480 aaKnown RBP19.86■□□□□ 0.77
CSNK1E-210ENST00000442216 TJP1Q07157 1748 aa19.85■□□□□ 0.77
CSNK1E-210ENST00000442216 CCDC184Q52MB2 194 aa19.85■□□□□ 0.77
CSNK1E-210ENST00000442216 KCPQ6ZWJ8 1503 aa19.85■□□□□ 0.77
CSNK1E-210ENST00000442216 TMPOP42166 694 aaKnown RBP19.84■□□□□ 0.77
CSNK1E-210ENST00000442216 ITPK1Q13572 414 aa19.84■□□□□ 0.77
CSNK1E-210ENST00000442216 MCM10Q7L590 875 aa19.84■□□□□ 0.77
CSNK1E-210ENST00000442216 SLC4A9Q96Q91 983 aa19.84■□□□□ 0.77
CSNK1E-210ENST00000442216 MRS2Q9HD23 443 aa19.84■□□□□ 0.77
CSNK1E-210ENST00000442216 TFCP2L1Q9NZI6 479 aa19.84■□□□□ 0.77
CSNK1E-210ENST00000442216 PTCD1O75127 700 aaKnown RBP19.83■□□□□ 0.77
CSNK1E-210ENST00000442216 LMOD3Q0VAK6 560 aa19.83■□□□□ 0.77
CSNK1E-210ENST00000442216 SLC39A6Q13433 755 aa19.83■□□□□ 0.77
CSNK1E-210ENST00000442216 TTC5Q8N0Z6 440 aa19.83■□□□□ 0.77
CSNK1E-210ENST00000442216 VSIG10Q8N0Z9 540 aa19.83■□□□□ 0.77
CSNK1E-210ENST00000442216 LINC00116Q8NCU8 138 aa19.83■□□□□ 0.77
CSNK1E-210ENST00000442216 MYH14Q7Z406 1995 aaKnown RBP19.83■□□□□ 0.76
CSNK1E-210ENST00000442216 RIPK4P57078 832 aa19.82■□□□□ 0.76
CSNK1E-210ENST00000442216 RC3H1Q5TC82 1133 aaKnown RBP19.82■□□□□ 0.76
CSNK1E-210ENST00000442216 ZNF790Q6PG37 636 aa19.82■□□□□ 0.76
CSNK1E-210ENST00000442216 CCDC146Q8IYE0 955 aa19.82■□□□□ 0.76
CSNK1E-210ENST00000442216 FLAD1Q8NFF5 587 aa19.82■□□□□ 0.76
CSNK1E-210ENST00000442216 PNISRQ8TF01 805 aaKnown RBP19.82■□□□□ 0.76
CSNK1E-210ENST00000442216 BTBD11A6QL63 1104 aa19.81■□□□□ 0.76
CSNK1E-210ENST00000442216 DCTN1Q14203 1278 aa19.81■□□□□ 0.76
CSNK1E-210ENST00000442216 TAF7Q15545 349 aaPredicted RBP19.81■□□□□ 0.76
CSNK1E-210ENST00000442216 AK7Q96M32 723 aa19.81■□□□□ 0.76
CSNK1E-210ENST00000442216 KDM3BQ7LBC6 1761 aa19.8■□□□□ 0.76
CSNK1E-210ENST00000442216 PNPLA7Q6ZV29 1317 aa19.8■□□□□ 0.76
CSNK1E-210ENST00000442216 CNTNAP4Q9C0A0 1308 aa19.8■□□□□ 0.76
CSNK1E-210ENST00000442216 COL24A1Q17RW2 1714 aa19.8■□□□□ 0.76
CSNK1E-210ENST00000442216 SLC16A10Q8TF71 515 aa19.8■□□□□ 0.76
CSNK1E-210ENST00000442216 PDGFDQ9GZP0 370 aaPredicted RBP19.78■□□□□ 0.76
CSNK1E-210ENST00000442216 SSFA2P28290 1259 aa19.77■□□□□ 0.76
CSNK1E-210ENST00000442216 ZNF496Q96IT1 587 aaPredicted RBP19.77■□□□□ 0.76
CSNK1E-210ENST00000442216 FMNL2Q96PY5 1086 aa19.77■□□□□ 0.76
CSNK1E-210ENST00000442216 TEX13AQ9BXU3 409 aaPredicted RBP19.77■□□□□ 0.76
CSNK1E-210ENST00000442216 MTFR1LQ9H019 292 aa19.77■□□□□ 0.76
CSNK1E-210ENST00000442216 SPON1Q9HCB6 807 aa19.77■□□□□ 0.76
CSNK1E-210ENST00000442216 HEG1Q9ULI3 1381 aa19.77■□□□□ 0.76
CSNK1E-210ENST00000442216 BABAM1Q9NWV8 329 aa19.76■□□□□ 0.75
CSNK1E-210ENST00000442216 GNPATO15228 680 aa19.75■□□□□ 0.75
CSNK1E-210ENST00000442216 COL23A1Q86Y22 540 aaPredicted RBP19.75■□□□□ 0.75
CSNK1E-210ENST00000442216 RRP7AQ9Y3A4 280 aaKnown RBP19.75■□□□□ 0.75
CSNK1E-210ENST00000442216 APAF1O14727 1248 aa19.74■□□□□ 0.75
CSNK1E-210ENST00000442216 RPS6KA4O75676 772 aa19.74■□□□□ 0.75
CSNK1E-210ENST00000442216 ADRA2BP18089 450 aa19.74■□□□□ 0.75
CSNK1E-210ENST00000442216 CRKLP46109 303 aaKnown RBP19.74■□□□□ 0.75
CSNK1E-210ENST00000442216 NEUROD2Q15784 382 aa19.74■□□□□ 0.75
CSNK1E-210ENST00000442216 DNAJC10Q8IXB1 793 aa19.74■□□□□ 0.75
CSNK1E-210ENST00000442216 TRIM35Q9UPQ4 493 aa19.74■□□□□ 0.75
CSNK1E-210ENST00000442216 RTCBQ9Y3I0 505 aaKnown RBP19.74■□□□□ 0.75
CSNK1E-210ENST00000442216 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.73■□□□□ 0.75
CSNK1E-210ENST00000442216 KCNQ3O43525 872 aa19.73■□□□□ 0.75
CSNK1E-210ENST00000442216 CYP19A1P11511 503 aaPredicted RBP19.73■□□□□ 0.75
CSNK1E-210ENST00000442216 NCBP3Q53F19 620 aaKnown RBP19.73■□□□□ 0.75
CSNK1E-210ENST00000442216 THUMPD2Q9BTF0 503 aaKnown RBP19.73■□□□□ 0.75
CSNK1E-210ENST00000442216 ZBTB7AO95365 584 aa19.72■□□□□ 0.75
CSNK1E-210ENST00000442216 STARD3NLO95772 234 aa19.72■□□□□ 0.75
CSNK1E-210ENST00000442216 C4AP0C0L4 1744 aa19.72■□□□□ 0.75
CSNK1E-210ENST00000442216 LAMB4A4D0S4 1761 aa19.72■□□□□ 0.75
CSNK1E-210ENST00000442216 TRAPPC3LQ5T215 181 aa19.71■□□□□ 0.75
CSNK1E-210ENST00000442216 AMIGO3Q86WK7 504 aa19.71■□□□□ 0.75
CSNK1E-210ENST00000442216 CCDC87Q9NVE4 849 aa19.71■□□□□ 0.75
CSNK1E-210ENST00000442216 CCER2I3L3R5 266 aa19.7■□□□□ 0.74
CSNK1E-210ENST00000442216 SNRPA1P09661 255 aaKnown RBP19.7■□□□□ 0.74
CSNK1E-210ENST00000442216 INTS5Q6P9B9 1019 aaKnown RBP19.7■□□□□ 0.74
CSNK1E-210ENST00000442216 MSH5O43196 834 aa19.69■□□□□ 0.74
CSNK1E-210ENST00000442216 PHF14O94880 888 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms