RNA–Protein interactions for RNA: ENST00000441896.1

TNRC18P3-201, Transcript of trinucleotide repeat containing 18 pseudogene 3, humanhuman

BASIC

Gene TNRC18P3, Length 2,691 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18P3-201ENST00000441896 U2AF1Q01081 240 aaKnown RBP eCLIP20.95■□□□□ 0.94
TNRC18P3-201ENST00000441896 USP25Q9UHP3 1055 aa20.95■□□□□ 0.94
TNRC18P3-201ENST00000441896 USP26Q9BXU7 913 aa20.94■□□□□ 0.94
TNRC18P3-201ENST00000441896 GGNBP2Q9H3C7 697 aa20.93■□□□□ 0.94
TNRC18P3-201ENST00000441896 RIOK3O14730 519 aaKnown RBP20.93■□□□□ 0.94
TNRC18P3-201ENST00000441896 NSD2O96028 1365 aa20.92■□□□□ 0.94
TNRC18P3-201ENST00000441896 CPSF1Q10570 1443 aaKnown RBP20.92■□□□□ 0.94
TNRC18P3-201ENST00000441896 FYB1O15117 783 aa20.92■□□□□ 0.94
TNRC18P3-201ENST00000441896 NCBP3Q53F19 620 aaKnown RBP20.92■□□□□ 0.94
TNRC18P3-201ENST00000441896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.92■□□□□ 0.94
TNRC18P3-201ENST00000441896 CFAP53Q96M91 514 aa20.91■□□□□ 0.94
TNRC18P3-201ENST00000441896 IPO8O15397 1037 aaKnown RBP20.91■□□□□ 0.94
TNRC18P3-201ENST00000441896 ADCY5O95622 1261 aa20.91■□□□□ 0.94
TNRC18P3-201ENST00000441896 SIRT2Q8IXJ6 389 aa20.9■□□□□ 0.94
TNRC18P3-201ENST00000441896 TRIM35Q9UPQ4 493 aa20.9■□□□□ 0.94
TNRC18P3-201ENST00000441896 CDC42BPGQ6DT37 1551 aa20.9■□□□□ 0.94
TNRC18P3-201ENST00000441896 ST18O60284 1047 aa20.9■□□□□ 0.94
TNRC18P3-201ENST00000441896 ZBTB7BO15156 539 aaPredicted RBP20.89■□□□□ 0.93
TNRC18P3-201ENST00000441896 LMTK3Q96Q04 1460 aa20.88■□□□□ 0.93
TNRC18P3-201ENST00000441896 ACEP12821 1306 aa20.87■□□□□ 0.93
TNRC18P3-201ENST00000441896 SYAP1Q96A49 352 aaPredicted RBP20.87■□□□□ 0.93
TNRC18P3-201ENST00000441896 FEZ1Q99689 392 aa20.87■□□□□ 0.93
TNRC18P3-201ENST00000441896 OGFRQ9NZT2 677 aa20.87■□□□□ 0.93
TNRC18P3-201ENST00000441896 TOPAZ1Q8N9V7 1692 aa20.87■□□□□ 0.93
TNRC18P3-201ENST00000441896 EDC4Q6P2E9 1401 aaKnown RBP20.86■□□□□ 0.93
TNRC18P3-201ENST00000441896 PLEKHG3A1L390 1219 aa20.86■□□□□ 0.93
TNRC18P3-201ENST00000441896 CTIFO43310 598 aaKnown RBP20.86■□□□□ 0.93
TNRC18P3-201ENST00000441896 UVSSAQ2YD98 709 aa20.86■□□□□ 0.93
TNRC18P3-201ENST00000441896 PLEKHM2Q8IWE5 1019 aa20.86■□□□□ 0.93
TNRC18P3-201ENST00000441896 PLCD3Q8N3E9 789 aa20.86■□□□□ 0.93
TNRC18P3-201ENST00000441896 DIAPH3Q9NSV4 1193 aa20.86■□□□□ 0.93
TNRC18P3-201ENST00000441896 GADD45BO75293 160 aaPredicted RBP20.86■□□□□ 0.93
TNRC18P3-201ENST00000441896 TMPOP42166 694 aaKnown RBP20.86■□□□□ 0.93
TNRC18P3-201ENST00000441896 PYCARDQ9ULZ3 195 aa20.85■□□□□ 0.93
TNRC18P3-201ENST00000441896 NALCNQ8IZF0 1738 aa20.85■□□□□ 0.93
TNRC18P3-201ENST00000441896 IRX5P78411 483 aaPredicted RBP20.85■□□□□ 0.93
TNRC18P3-201ENST00000441896 BRD1O95696 1058 aa20.84■□□□□ 0.93
TNRC18P3-201ENST00000441896 CDK11BP21127 795 aaKnown RBP20.84■□□□□ 0.93
TNRC18P3-201ENST00000441896 TTC22Q5TAA0 569 aa20.84■□□□□ 0.93
TNRC18P3-201ENST00000441896 FAM184AQ8NB25 1140 aa20.84■□□□□ 0.93
TNRC18P3-201ENST00000441896 GDPD2Q9HCC8 539 aa20.84■□□□□ 0.93
TNRC18P3-201ENST00000441896 NWD1Q149M9 1564 aa20.84■□□□□ 0.93
TNRC18P3-201ENST00000441896 CHAF1AQ13111 956 aaPredicted RBP20.83■□□□□ 0.93
TNRC18P3-201ENST00000441896 FOXD4L6Q3SYB3 417 aaPredicted RBP20.83■□□□□ 0.93
TNRC18P3-201ENST00000441896 FOXD4L3Q6VB84 417 aaPredicted RBP20.83■□□□□ 0.93
TNRC18P3-201ENST00000441896 C14orf37Q86TY3 774 aa20.83■□□□□ 0.93
TNRC18P3-201ENST00000441896 NME9Q86XW9 330 aa20.83■□□□□ 0.93
TNRC18P3-201ENST00000441896 KIAA1524Q8TCG1 905 aa20.83■□□□□ 0.93
TNRC18P3-201ENST00000441896 KCNF1Q9H3M0 494 aa20.83■□□□□ 0.92
TNRC18P3-201ENST00000441896 ITSN1Q15811 1721 aa20.83■□□□□ 0.92
TNRC18P3-201ENST00000441896 PHF14O94880 888 aa20.82■□□□□ 0.92
TNRC18P3-201ENST00000441896 NCBP1Q09161 790 aaKnown RBP20.82■□□□□ 0.92
TNRC18P3-201ENST00000441896 PROSER2Q86WR7 435 aaPredicted RBP20.82■□□□□ 0.92
TNRC18P3-201ENST00000441896 PLEKHF1Q96S99 279 aa20.82■□□□□ 0.92
TNRC18P3-201ENST00000441896 AKAP12Q02952 1782 aa20.82■□□□□ 0.92
TNRC18P3-201ENST00000441896 SMARCA5O60264 1052 aaPredicted RBP20.82■□□□□ 0.92
TNRC18P3-201ENST00000441896 SLFN14P0C7P3 912 aa20.82■□□□□ 0.92
TNRC18P3-201ENST00000441896 GABPB1Q06547 395 aaPredicted RBP20.82■□□□□ 0.92
TNRC18P3-201ENST00000441896 INTS3Q68E01 1043 aaKnown RBP20.82■□□□□ 0.92
TNRC18P3-201ENST00000441896 ZRANB1Q9UGI0 708 aa20.82■□□□□ 0.92
TNRC18P3-201ENST00000441896 KIF20BQ96Q89 1820 aa20.82■□□□□ 0.92
TNRC18P3-201ENST00000441896 MON2Q7Z3U7 1717 aa20.82■□□□□ 0.92
TNRC18P3-201ENST00000441896 ADGRL3Q9HAR2 1447 aa20.82■□□□□ 0.92
TNRC18P3-201ENST00000441896 HCLS1P14317 486 aaPredicted RBP20.81■□□□□ 0.92
TNRC18P3-201ENST00000441896 KCNJ4P48050 445 aa20.81■□□□□ 0.92
TNRC18P3-201ENST00000441896 RGPD8O14715 1765 aaPredicted RBP20.81■□□□□ 0.92
TNRC18P3-201ENST00000441896 ALDH1L2Q3SY69 923 aa20.81■□□□□ 0.92
TNRC18P3-201ENST00000441896 C16orf71Q8IYS4 520 aaPredicted RBP20.81■□□□□ 0.92
TNRC18P3-201ENST00000441896 CTNNA3Q9UI47 895 aa20.81■□□□□ 0.92
TNRC18P3-201ENST00000441896 ANKARQ7Z5J8 1434 aa20.81■□□□□ 0.92
TNRC18P3-201ENST00000441896 FMN2Q9NZ56 1722 aa20.81■□□□□ 0.92
TNRC18P3-201ENST00000441896 ANKRD26Q9UPS8 1709 aa20.8■□□□□ 0.92
TNRC18P3-201ENST00000441896 NGDNQ8NEJ9 315 aaKnown RBP20.8■□□□□ 0.92
TNRC18P3-201ENST00000441896 TMX3Q96JJ7 454 aa20.8■□□□□ 0.92
TNRC18P3-201ENST00000441896 IL16Q14005 1332 aa20.8■□□□□ 0.92
TNRC18P3-201ENST00000441896 MAPK8IP2Q13387 824 aaPredicted RBP20.79■□□□□ 0.92
TNRC18P3-201ENST00000441896 U2SURPO15042 1029 aaKnown RBP20.79■□□□□ 0.92
TNRC18P3-201ENST00000441896 USP6P35125 1406 aa20.79■□□□□ 0.92
TNRC18P3-201ENST00000441896 TTC21BQ7Z4L5 1316 aa20.78■□□□□ 0.92
TNRC18P3-201ENST00000441896 FBLN1P23142 703 aa20.78■□□□□ 0.92
TNRC18P3-201ENST00000441896 OTUD7AQ8TE49 926 aaPredicted RBP20.78■□□□□ 0.92
TNRC18P3-201ENST00000441896 CFAP44Q96MT7 982 aa20.78■□□□□ 0.92
TNRC18P3-201ENST00000441896 KDM4AO75164 1064 aa20.77■□□□□ 0.92
TNRC18P3-201ENST00000441896 PLCB2Q00722 1185 aa20.77■□□□□ 0.92
TNRC18P3-201ENST00000441896 USP48Q86UV5 1035 aa20.77■□□□□ 0.92
TNRC18P3-201ENST00000441896 AP5Z1O43299 807 aa20.77■□□□□ 0.92
TNRC18P3-201ENST00000441896 STRCQ7RTU9 1775 aa20.76■□□□□ 0.91
TNRC18P3-201ENST00000441896 SDSP20132 328 aa20.76■□□□□ 0.91
TNRC18P3-201ENST00000441896 DDX41Q9UJV9 622 aaKnown RBP20.76■□□□□ 0.91
TNRC18P3-201ENST00000441896 TPRNQ4KMQ1 711 aa20.75■□□□□ 0.91
TNRC18P3-201ENST00000441896 COG3Q96JB2 828 aa20.75■□□□□ 0.91
TNRC18P3-201ENST00000441896 NEK4P51957 841 aa20.74■□□□□ 0.91
TNRC18P3-201ENST00000441896 NRKQ7Z2Y5 1582 aa20.74■□□□□ 0.91
TNRC18P3-201ENST00000441896 STRCP1A6NGW2 1772 aa20.74■□□□□ 0.91
TNRC18P3-201ENST00000441896 NAA30Q147X3 362 aaPredicted RBP20.74■□□□□ 0.91
TNRC18P3-201ENST00000441896 CCDC183Q5T5S1 534 aa20.74■□□□□ 0.91
TNRC18P3-201ENST00000441896 SPC24Q8NBT2 197 aa20.74■□□□□ 0.91
TNRC18P3-201ENST00000441896 NOL8Q76FK4 1167 aaKnown RBP20.73■□□□□ 0.91
TNRC18P3-201ENST00000441896 SSH2Q76I76 1423 aa20.73■□□□□ 0.91
TNRC18P3-201ENST00000441896 TERF2Q15554 542 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms