RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 SPATA31A5Q5VU36 1347 aa8□□□□□ -1.13
PUM1-207ENST00000440538 SPATA31A7Q8IWB4 1347 aa8□□□□□ -1.13
PUM1-207ENST00000440538 CRB1P82279 1406 aa8□□□□□ -1.13
PUM1-207ENST00000440538 SLFN5Q08AF3 891 aa8□□□□□ -1.13
PUM1-207ENST00000440538 RTL1A6NKG5 1358 aa8□□□□□ -1.13
PUM1-207ENST00000440538 GNAI1P63096 354 aa7.99□□□□□ -1.13
PUM1-207ENST00000440538 TAF7Q15545 349 aaPredicted RBP7.99□□□□□ -1.13
PUM1-207ENST00000440538 TWISTNBQ3B726 338 aaPredicted RBP7.99□□□□□ -1.13
PUM1-207ENST00000440538 MAP3K5Q99683 1374 aa7.99□□□□□ -1.13
PUM1-207ENST00000440538 BLMP54132 1417 aaPredicted RBP7.99□□□□□ -1.13
PUM1-207ENST00000440538 PCDH11XQ9BZA7 1347 aa7.99□□□□□ -1.13
PUM1-207ENST00000440538 PCDH11YQ9BZA8 1340 aa7.99□□□□□ -1.13
PUM1-207ENST00000440538 RGPD5Q99666 1765 aa7.99□□□□□ -1.13
PUM1-207ENST00000440538 COL3A1P02461 1466 aaPredicted RBP7.99□□□□□ -1.13
PUM1-207ENST00000440538 TRPM3Q9HCF6 1732 aaPredicted RBP7.99□□□□□ -1.13
PUM1-207ENST00000440538 NFKBIBQ15653 356 aa7.99□□□□□ -1.13
PUM1-207ENST00000440538 VPS72Q15906 364 aa7.99□□□□□ -1.13
PUM1-207ENST00000440538 DUSP27Q5VZP5 1158 aa7.99□□□□□ -1.13
PUM1-207ENST00000440538 FNBP4Q8N3X1 1017 aaPredicted RBP7.99□□□□□ -1.13
PUM1-207ENST00000440538 COL16A1Q07092 1604 aaPredicted RBP7.99□□□□□ -1.13
PUM1-207ENST00000440538 LTN1O94822 1766 aa7.98□□□□□ -1.13
PUM1-207ENST00000440538 GSE1Q14687 1217 aa7.98□□□□□ -1.13
PUM1-207ENST00000440538 ZNF772Q68DY9 489 aaPredicted RBP7.98□□□□□ -1.13
PUM1-207ENST00000440538 ZNF496Q96IT1 587 aaPredicted RBP7.98□□□□□ -1.13
PUM1-207ENST00000440538 PHF14O94880 888 aa7.98□□□□□ -1.13
PUM1-207ENST00000440538 PIGBQ92521 554 aa7.98□□□□□ -1.13
PUM1-207ENST00000440538 SLC4A2P04920 1241 aa7.97□□□□□ -1.13
PUM1-207ENST00000440538 HDGFL1Q5TGJ6 251 aa7.97□□□□□ -1.13
PUM1-207ENST00000440538 KRT27Q7Z3Y8 459 aa7.97□□□□□ -1.13
PUM1-207ENST00000440538 BCL9LQ86UU0 1499 aa7.97□□□□□ -1.13
PUM1-207ENST00000440538 C20orf194Q5TEA3 1177 aa7.97□□□□□ -1.13
PUM1-207ENST00000440538 PANK1Q8TE04 598 aa7.97□□□□□ -1.13
PUM1-207ENST00000440538 DCAF5Q96JK2 942 aa7.97□□□□□ -1.13
PUM1-207ENST00000440538 RGS17Q9UGC6 210 aaPredicted RBP7.97□□□□□ -1.13
PUM1-207ENST00000440538 RGPD2P0DJD1 1756 aa7.97□□□□□ -1.13
PUM1-207ENST00000440538 ALS2Q96Q42 1657 aa7.97□□□□□ -1.13
PUM1-207ENST00000440538 F6X3S4 739 aa7.97□□□□□ -1.13
PUM1-207ENST00000440538 CALD1Q05682 793 aaKnown RBP7.97□□□□□ -1.13
PUM1-207ENST00000440538 JARID2Q92833 1246 aaPredicted RBP7.97□□□□□ -1.13
PUM1-207ENST00000440538 CFAP44Q96MT7 982 aa7.97□□□□□ -1.13
PUM1-207ENST00000440538 SLC52A2Q9HAB3 445 aa7.97□□□□□ -1.13
PUM1-207ENST00000440538 SLIT3O75094 1523 aa7.97□□□□□ -1.13
PUM1-207ENST00000440538 RBM6P78332 1123 aaKnown RBP7.97□□□□□ -1.13
PUM1-207ENST00000440538 CRBNQ96SW2 442 aa7.97□□□□□ -1.13
PUM1-207ENST00000440538 AHDC1Q5TGY3 1603 aaPredicted RBP7.96□□□□□ -1.13
PUM1-207ENST00000440538 A1BGP04217 495 aa7.96□□□□□ -1.13
PUM1-207ENST00000440538 FTSJ3Q8IY81 847 aaKnown RBP7.96□□□□□ -1.13
PUM1-207ENST00000440538 SSH1Q8WYL5 1049 aa7.96□□□□□ -1.13
PUM1-207ENST00000440538 USP16Q9Y5T5 823 aa7.96□□□□□ -1.13
PUM1-207ENST00000440538 NHSL1Q5SYE7 1610 aa7.96□□□□□ -1.14
PUM1-207ENST00000440538 ZNF790Q6PG37 636 aa7.96□□□□□ -1.14
PUM1-207ENST00000440538 WDR63Q8IWG1 891 aa7.96□□□□□ -1.14
PUM1-207ENST00000440538 STK31Q9BXU1 1019 aa7.96□□□□□ -1.14
PUM1-207ENST00000440538 FRAT2O75474 233 aaPredicted RBP7.96□□□□□ -1.14
PUM1-207ENST00000440538 APBA3O96018 575 aa7.96□□□□□ -1.14
PUM1-207ENST00000440538 ATP6V1AP38606 617 aa7.96□□□□□ -1.14
PUM1-207ENST00000440538 FKBP5Q13451 457 aaPredicted RBP7.96□□□□□ -1.14
PUM1-207ENST00000440538 COG6Q9Y2V7 657 aa7.96□□□□□ -1.14
PUM1-207ENST00000440538 HSP90AB1P08238 724 aaKnown RBP7.95□□□□□ -1.14
PUM1-207ENST00000440538 BICDL1Q6ZP65 573 aa7.95□□□□□ -1.14
PUM1-207ENST00000440538 DNAJC10Q8IXB1 793 aa7.95□□□□□ -1.14
PUM1-207ENST00000440538 KDRP35968 1356 aa7.95□□□□□ -1.14
PUM1-207ENST00000440538 KIF24Q5T7B8 1368 aa7.95□□□□□ -1.14
PUM1-207ENST00000440538 G2E3Q7L622 706 aa7.95□□□□□ -1.14
PUM1-207ENST00000440538 DEFB132Q7Z7B7 95 aa7.95□□□□□ -1.14
PUM1-207ENST00000440538 PHAXQ9H814 394 aaKnown RBP7.95□□□□□ -1.14
PUM1-207ENST00000440538 CHPF2Q9P2E5 772 aa7.95□□□□□ -1.14
PUM1-207ENST00000440538 WWC3Q9ULE0 1092 aa7.95□□□□□ -1.14
PUM1-207ENST00000440538 IFT57Q9NWB7 429 aa7.95□□□□□ -1.14
PUM1-207ENST00000440538 NOB1Q9ULX3 412 aaKnown RBP7.95□□□□□ -1.14
PUM1-207ENST00000440538 PROSER3Q2NL68 480 aa7.94□□□□□ -1.14
PUM1-207ENST00000440538 ITPRIPQ8IWB1 547 aa7.94□□□□□ -1.14
PUM1-207ENST00000440538 UBE2Q2Q8WVN8 375 aa7.94□□□□□ -1.14
PUM1-207ENST00000440538 PHRF1Q9P1Y6 1649 aaKnown RBP7.94□□□□□ -1.14
PUM1-207ENST00000440538 NPHP1O15259 732 aa7.94□□□□□ -1.14
PUM1-207ENST00000440538 ZBTB3Q9H5J0 574 aa7.94□□□□□ -1.14
PUM1-207ENST00000440538 APBB1O00213 710 aa7.94□□□□□ -1.14
PUM1-207ENST00000440538 TBC1D2BQ9UPU7 963 aa7.94□□□□□ -1.14
PUM1-207ENST00000440538 UTRNP46939 3433 aa7.94□□□□□ -1.14
PUM1-207ENST00000440538 CHL1O00533 1208 aa7.93□□□□□ -1.14
PUM1-207ENST00000440538 C1orf115Q9H7X2 142 aa7.93□□□□□ -1.14
PUM1-207ENST00000440538 CCDC24Q8N4L8 307 aa7.93□□□□□ -1.14
PUM1-207ENST00000440538 ANKRD26Q9UPS8 1709 aa7.93□□□□□ -1.14
PUM1-207ENST00000440538 EN1Q05925 392 aaPredicted RBP7.93□□□□□ -1.14
PUM1-207ENST00000440538 SF3B2Q13435 895 aaKnown RBP7.93□□□□□ -1.14
PUM1-207ENST00000440538 FMNL2Q96PY5 1086 aa7.93□□□□□ -1.14
PUM1-207ENST00000440538 BCL11BQ9C0K0 894 aaPredicted RBP7.93□□□□□ -1.14
PUM1-207ENST00000440538 ATG3Q9NT62 314 aa7.93□□□□□ -1.14
PUM1-207ENST00000440538 SHPRHQ149N8 1683 aa7.92□□□□□ -1.14
PUM1-207ENST00000440538 VAMP4O75379 141 aa7.92□□□□□ -1.14
PUM1-207ENST00000440538 RGS3P49796 1198 aa7.92□□□□□ -1.14
PUM1-207ENST00000440538 RARSP54136 660 aaKnown RBP7.92□□□□□ -1.14
PUM1-207ENST00000440538 EIF4A1P60842 406 aaKnown RBP7.92□□□□□ -1.14
PUM1-207ENST00000440538 KLHL34Q8N239 644 aa7.92□□□□□ -1.14
PUM1-207ENST00000440538 CCDC85AQ96PX6 553 aaPredicted RBP7.92□□□□□ -1.14
PUM1-207ENST00000440538 DAXXQ9UER7 740 aaPredicted RBP7.92□□□□□ -1.14
PUM1-207ENST00000440538 THRAP3Q9Y2W1 955 aaKnown RBP7.92□□□□□ -1.14
PUM1-207ENST00000440538 ZNF521Q96K83 1311 aa7.92□□□□□ -1.14
PUM1-207ENST00000440538 ATP5J2-PTCD1G3V325 749 aa7.92□□□□□ -1.14
PUM1-207ENST00000440538 MARF1Q9Y4F3 1742 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms