RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 MADDQ8WXG6 1647 aa14□□□□□ -0.17
SMPD4-209ENST00000439886 LAMC1P11047 1609 aa13.99□□□□□ -0.17
SMPD4-209ENST00000439886 KDM4AO75164 1064 aa13.99□□□□□ -0.17
SMPD4-209ENST00000439886 NUTM1Q86Y26 1132 aa13.99□□□□□ -0.17
SMPD4-209ENST00000439886 RPAP2Q8IXW5 612 aaPredicted RBP13.99□□□□□ -0.17
SMPD4-209ENST00000439886 IQSEC2Q5JU85 1478 aa13.99□□□□□ -0.17
SMPD4-209ENST00000439886 MCM2P49736 904 aa13.99□□□□□ -0.17
SMPD4-209ENST00000439886 A0A1W2PP64 1363 aa13.99□□□□□ -0.17
SMPD4-209ENST00000439886 CCDC186Q7Z3E2 898 aa13.99□□□□□ -0.17
SMPD4-209ENST00000439886 ZRANB1Q9UGI0 708 aa13.99□□□□□ -0.17
SMPD4-209ENST00000439886 MX1P20591 662 aa13.98□□□□□ -0.17
SMPD4-209ENST00000439886 OS9Q13438 667 aaPredicted RBP13.98□□□□□ -0.17
SMPD4-209ENST00000439886 CCDC83Q8IWF9 413 aa13.98□□□□□ -0.17
SMPD4-209ENST00000439886 ARHGAP45Q92619 1136 aa13.98□□□□□ -0.17
SMPD4-209ENST00000439886 DNM1Q05193 864 aaKnown RBP13.98□□□□□ -0.17
SMPD4-209ENST00000439886 LRMPQ12912 555 aa13.98□□□□□ -0.17
SMPD4-209ENST00000439886 ZNF428Q96B54 188 aa13.98□□□□□ -0.17
SMPD4-209ENST00000439886 ESYT1Q9BSJ8 1104 aa13.98□□□□□ -0.17
SMPD4-209ENST00000439886 ANKRD36BQ8N2N9 1353 aa13.98□□□□□ -0.17
SMPD4-209ENST00000439886 VGFO15240 615 aaPredicted RBP13.97□□□□□ -0.17
SMPD4-209ENST00000439886 TNNT1P13805 278 aa13.97□□□□□ -0.17
SMPD4-209ENST00000439886 FAM173BQ6P4H8 233 aa13.97□□□□□ -0.17
SMPD4-209ENST00000439886 CCDC112Q8NEF3 446 aa13.97□□□□□ -0.17
SMPD4-209ENST00000439886 FOSBP53539 338 aa13.97□□□□□ -0.17
SMPD4-209ENST00000439886 RTF1Q92541 710 aaKnown RBP13.97□□□□□ -0.17
SMPD4-209ENST00000439886 CDK19Q9BWU1 502 aa13.97□□□□□ -0.17
SMPD4-209ENST00000439886 LMOD3Q0VAK6 560 aa13.96□□□□□ -0.17
SMPD4-209ENST00000439886 FKBP5Q13451 457 aaPredicted RBP13.96□□□□□ -0.17
SMPD4-209ENST00000439886 LUZP1Q86V48 1076 aa13.96□□□□□ -0.17
SMPD4-209ENST00000439886 ABCA8O94911 1581 aa13.96□□□□□ -0.18
SMPD4-209ENST00000439886 TTC37Q6PGP7 1564 aa13.96□□□□□ -0.18
SMPD4-209ENST00000439886 CCDC192P0DO97 292 aa13.96□□□□□ -0.18
SMPD4-209ENST00000439886 UVSSAQ2YD98 709 aa13.96□□□□□ -0.18
SMPD4-209ENST00000439886 LRRCC1Q9C099 1032 aa13.96□□□□□ -0.18
SMPD4-209ENST00000439886 TRMT1Q9NXH9 659 aaKnown RBP13.96□□□□□ -0.18
SMPD4-209ENST00000439886 TFIP11Q9UBB9 837 aaKnown RBP13.96□□□□□ -0.18
SMPD4-209ENST00000439886 SPG7Q9UQ90 795 aa13.96□□□□□ -0.18
SMPD4-209ENST00000439886 STX6O43752 255 aa13.95□□□□□ -0.18
SMPD4-209ENST00000439886 CWC27Q6UX04 472 aaKnown RBP13.95□□□□□ -0.18
SMPD4-209ENST00000439886 POLKQ9UBT6 870 aa13.95□□□□□ -0.18
SMPD4-209ENST00000439886 ABCC4O15439 1325 aa13.95□□□□□ -0.18
SMPD4-209ENST00000439886 SULT6B1Q6IMI4 303 aa13.95□□□□□ -0.18
SMPD4-209ENST00000439886 ATP6V1DQ9Y5K8 247 aa13.95□□□□□ -0.18
SMPD4-209ENST00000439886 IQGAP1P46940 1657 aa13.94□□□□□ -0.18
SMPD4-209ENST00000439886 CEBPZQ03701 1054 aaKnown RBP13.94□□□□□ -0.18
SMPD4-209ENST00000439886 MYOM1P52179 1685 aa13.94□□□□□ -0.18
SMPD4-209ENST00000439886 UBE2HP62256 183 aa13.94□□□□□ -0.18
SMPD4-209ENST00000439886 NME9Q86XW9 330 aa13.94□□□□□ -0.18
SMPD4-209ENST00000439886 ZSCAN22P10073 491 aaPredicted RBP13.94□□□□□ -0.18
SMPD4-209ENST00000439886 SYT1P21579 422 aa13.94□□□□□ -0.18
SMPD4-209ENST00000439886 NECAB1Q8N987 351 aa13.94□□□□□ -0.18
SMPD4-209ENST00000439886 BICD2Q8TD16 824 aa13.94□□□□□ -0.18
SMPD4-209ENST00000439886 NRBP1Q9UHY1 535 aa13.94□□□□□ -0.18
SMPD4-209ENST00000439886 IQGAP3Q86VI3 1631 aa13.93□□□□□ -0.18
SMPD4-209ENST00000439886 FILIP1Q7Z7B0 1213 aa13.93□□□□□ -0.18
SMPD4-209ENST00000439886 STK31Q9BXU1 1019 aa13.93□□□□□ -0.18
SMPD4-209ENST00000439886 MSH6P52701 1360 aa13.93□□□□□ -0.18
SMPD4-209ENST00000439886 CEP152O94986 1710 aa13.93□□□□□ -0.18
SMPD4-209ENST00000439886 CASTP20810 708 aaKnown RBP13.93□□□□□ -0.18
SMPD4-209ENST00000439886 G2E3Q7L622 706 aa13.93□□□□□ -0.18
SMPD4-209ENST00000439886 CDC42BPBQ9Y5S2 1711 aa13.93□□□□□ -0.18
SMPD4-209ENST00000439886 UNC5CLQ8IV45 518 aa13.92□□□□□ -0.18
SMPD4-209ENST00000439886 SURF6O75683 361 aaKnown RBP13.92□□□□□ -0.18
SMPD4-209ENST00000439886 GNAI2P04899 355 aa13.92□□□□□ -0.18
SMPD4-209ENST00000439886 STK3Q13188 491 aa13.92□□□□□ -0.18
SMPD4-209ENST00000439886 KIAA1524Q8TCG1 905 aa13.92□□□□□ -0.18
SMPD4-209ENST00000439886 CLTCL1P53675 1640 aa13.92□□□□□ -0.18
SMPD4-209ENST00000439886 UNC13BO14795 1591 aa13.92□□□□□ -0.18
SMPD4-209ENST00000439886 CHMLP26374 656 aa13.92□□□□□ -0.18
SMPD4-209ENST00000439886 GORABQ5T7V8 394 aa13.92□□□□□ -0.18
SMPD4-209ENST00000439886 EP400NLQ6ZTU2 488 aa13.92□□□□□ -0.18
SMPD4-209ENST00000439886 WAPLQ7Z5K2 1190 aa13.92□□□□□ -0.18
SMPD4-209ENST00000439886 TCEANC2Q96MN5 208 aa13.92□□□□□ -0.18
SMPD4-209ENST00000439886 TNMDQ9H2S6 317 aa13.92□□□□□ -0.18
SMPD4-209ENST00000439886 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.92□□□□□ -0.18
SMPD4-209ENST00000439886 GJB2P29033 226 aa13.91□□□□□ -0.18
SMPD4-209ENST00000439886 SYTL4Q96C24 671 aaPredicted RBP13.91□□□□□ -0.18
SMPD4-209ENST00000439886 RNF17Q9BXT8 1623 aaKnown RBP13.91□□□□□ -0.18
SMPD4-209ENST00000439886 NUP62CLQ9H1M0 184 aa13.91□□□□□ -0.18
SMPD4-209ENST00000439886 KCNF1Q9H3M0 494 aa13.91□□□□□ -0.18
SMPD4-209ENST00000439886 TSPYL4Q9UJ04 414 aa13.91□□□□□ -0.18
SMPD4-209ENST00000439886 AK2P54819 239 aa13.91□□□□□ -0.18
SMPD4-209ENST00000439886 ZNF622Q969S3 477 aaKnown RBP eCLIP13.91□□□□□ -0.18
SMPD4-209ENST00000439886 CFAP74Q9C0B2 1584 aa13.91□□□□□ -0.18
SMPD4-209ENST00000439886 GOLGA6L19H0YKK7 550 aa13.9□□□□□ -0.18
SMPD4-209ENST00000439886 PRR29P0C7W0 189 aa13.9□□□□□ -0.18
SMPD4-209ENST00000439886 JAKMIP1Q96N16 626 aaKnown RBP13.9□□□□□ -0.18
SMPD4-209ENST00000439886 LOC102724159A0A0B4J2E5 919 aa13.9□□□□□ -0.18
SMPD4-209ENST00000439886 CCDC66A2RUB6 948 aa13.9□□□□□ -0.18
SMPD4-209ENST00000439886 AP5Z1O43299 807 aa13.9□□□□□ -0.18
SMPD4-209ENST00000439886 F13A1P00488 732 aa13.9□□□□□ -0.18
SMPD4-209ENST00000439886 PWP2Q15269 919 aaKnown RBP13.9□□□□□ -0.18
SMPD4-209ENST00000439886 MAP3K11Q16584 847 aa13.9□□□□□ -0.18
SMPD4-209ENST00000439886 COG3Q96JB2 828 aa13.9□□□□□ -0.18
SMPD4-209ENST00000439886 ANO6Q4KMQ2 910 aa13.89□□□□□ -0.19
SMPD4-209ENST00000439886 LARP1BQ659C4 914 aaKnown RBP13.89□□□□□ -0.19
SMPD4-209ENST00000439886 NSD2O96028 1365 aa13.89□□□□□ -0.19
SMPD4-209ENST00000439886 TIGD1Q96MW7 591 aa13.89□□□□□ -0.19
SMPD4-209ENST00000439886 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.89□□□□□ -0.191e-6■■■■□ 23.9
SMPD4-209ENST00000439886 INTS4Q96HW7 963 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms