RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 SLKQ9H2G2 1235 aaPredicted RBP12.96□□□□□ -0.33
CPNE1-218ENST00000439806 CEMIPQ8WUJ3 1361 aa12.95□□□□□ -0.34
CPNE1-218ENST00000439806 GNAI2P04899 355 aa12.95□□□□□ -0.34
CPNE1-218ENST00000439806 RBM25P49756 843 aaKnown RBP12.95□□□□□ -0.34
CPNE1-218ENST00000439806 TEFQ10587 303 aa12.95□□□□□ -0.34
CPNE1-218ENST00000439806 AMOTQ4VCS5 1084 aa12.95□□□□□ -0.34
CPNE1-218ENST00000439806 AKAP4Q5JQC9 854 aa12.95□□□□□ -0.34
CPNE1-218ENST00000439806 C1orf141Q5JVX7 400 aa12.95□□□□□ -0.34
CPNE1-218ENST00000439806 TTC22Q5TAA0 569 aa12.95□□□□□ -0.34
CPNE1-218ENST00000439806 HDGFL1Q5TGJ6 251 aa12.95□□□□□ -0.34
CPNE1-218ENST00000439806 PLEKHM2Q8IWE5 1019 aa12.95□□□□□ -0.34
CPNE1-218ENST00000439806 ANKRD24Q8TF21 1146 aa12.95□□□□□ -0.34
CPNE1-218ENST00000439806 STRCP1A6NGW2 1772 aa12.94□□□□□ -0.34
CPNE1-218ENST00000439806 TBC1D9Q6ZT07 1266 aa12.94□□□□□ -0.34
CPNE1-218ENST00000439806 BCL11AQ9H165 835 aa12.94□□□□□ -0.34
CPNE1-218ENST00000439806 C19orf44Q9H6X5 657 aa12.94□□□□□ -0.34
CPNE1-218ENST00000439806 OVOS2A0A0G2JMS6 1433 aa12.94□□□□□ -0.34
CPNE1-218ENST00000439806 APBB1O00213 710 aa12.93□□□□□ -0.34
CPNE1-218ENST00000439806 HOXB7P09629 217 aa12.93□□□□□ -0.34
CPNE1-218ENST00000439806 ATF3P18847 181 aa12.93□□□□□ -0.34
CPNE1-218ENST00000439806 SIPA1L3O60292 1781 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-218ENST00000439806 SMARCA5O60264 1052 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-218ENST00000439806 GSPT1P15170 499 aaKnown RBP12.92□□□□□ -0.34
CPNE1-218ENST00000439806 DCCP43146 1447 aa12.92□□□□□ -0.34
CPNE1-218ENST00000439806 EIF4A1P60842 406 aaKnown RBP12.92□□□□□ -0.34
CPNE1-218ENST00000439806 MST1RQ04912 1400 aa12.92□□□□□ -0.34
CPNE1-218ENST00000439806 CASC1Q6TDU7 716 aa12.92□□□□□ -0.34
CPNE1-218ENST00000439806 LGR6Q9HBX8 967 aa12.92□□□□□ -0.34
CPNE1-218ENST00000439806 PXDNQ92626 1479 aa12.91□□□□□ -0.34
CPNE1-218ENST00000439806 BTBD11A6QL63 1104 aa12.91□□□□□ -0.34
CPNE1-218ENST00000439806 RNMTO43148 476 aaKnown RBP12.91□□□□□ -0.34
CPNE1-218ENST00000439806 FRAT2O75474 233 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-218ENST00000439806 EIF2S2P20042 333 aaKnown RBP12.91□□□□□ -0.34
CPNE1-218ENST00000439806 SCN11AQ9UI33 1791 aa12.91□□□□□ -0.34
CPNE1-218ENST00000439806 NCOA3Q9Y6Q9 1424 aa12.9□□□□□ -0.34
CPNE1-218ENST00000439806 UBTFL1P0CB47 393 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-218ENST00000439806 ATP8B2P98198 1209 aa12.9□□□□□ -0.34
CPNE1-218ENST00000439806 C16orf71Q8IYS4 520 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-218ENST00000439806 SPRYD3Q8NCJ5 442 aa12.9□□□□□ -0.34
CPNE1-218ENST00000439806 SNX21Q969T3 373 aa12.9□□□□□ -0.34
CPNE1-218ENST00000439806 TMEM94Q12767 1356 aa12.9□□□□□ -0.34
CPNE1-218ENST00000439806 LMTK3Q96Q04 1460 aa12.9□□□□□ -0.34
CPNE1-218ENST00000439806 ADAMTS7Q9UKP4 1686 aa12.89□□□□□ -0.35
CPNE1-218ENST00000439806 CRYBG1Q9Y4K1 1723 aa12.89□□□□□ -0.35
CPNE1-218ENST00000439806 MPRIPQ6WCQ1 1025 aa12.89□□□□□ -0.35
CPNE1-218ENST00000439806 ANTXR1Q9H6X2 564 aa12.89□□□□□ -0.35
CPNE1-218ENST00000439806 TUBGCP6Q96RT7 1819 aa12.89□□□□□ -0.35
CPNE1-218ENST00000439806 AK9Q5TCS8 1911 aa12.88□□□□□ -0.35
CPNE1-218ENST00000439806 HSP90AB1P08238 724 aaKnown RBP12.88□□□□□ -0.35
CPNE1-218ENST00000439806 OTUD7AQ8TE49 926 aaPredicted RBP12.88□□□□□ -0.35
CPNE1-218ENST00000439806 SRCIN1Q9C0H9 1055 aa12.88□□□□□ -0.35
CPNE1-218ENST00000439806 PHAXQ9H814 394 aaKnown RBP12.88□□□□□ -0.35
CPNE1-218ENST00000439806 CHMP5Q9NZZ3 219 aa12.88□□□□□ -0.35
CPNE1-218ENST00000439806 LRRFIP2Q9Y608 721 aaKnown RBP12.88□□□□□ -0.35
CPNE1-218ENST00000439806 COL18A1P39060 1754 aa12.88□□□□□ -0.35
CPNE1-218ENST00000439806 KCNQ3O43525 872 aa12.87□□□□□ -0.35
CPNE1-218ENST00000439806 SDSP20132 328 aa12.87□□□□□ -0.35
CPNE1-218ENST00000439806 ZC3H6P61129 1189 aaKnown RBP12.87□□□□□ -0.35
CPNE1-218ENST00000439806 LRRCC1Q9C099 1032 aa12.87□□□□□ -0.35
CPNE1-218ENST00000439806 CHPF2Q9P2E5 772 aa12.87□□□□□ -0.35
CPNE1-218ENST00000439806 EXOC6BQ9Y2D4 811 aa12.87□□□□□ -0.35
CPNE1-218ENST00000439806 ABCC6O95255 1503 aa12.87□□□□□ -0.35
CPNE1-218ENST00000439806 TNS3Q68CZ2 1445 aa12.87□□□□□ -0.35
CPNE1-218ENST00000439806 TATP17735 454 aaPredicted RBP12.86□□□□□ -0.35
CPNE1-218ENST00000439806 GSE1Q14687 1217 aa12.86□□□□□ -0.35
CPNE1-218ENST00000439806 DNAAF4Q8WXU2 420 aa12.86□□□□□ -0.35
CPNE1-218ENST00000439806 RAPGEF4Q8WZA2 1011 aa12.86□□□□□ -0.35
CPNE1-218ENST00000439806 ERBB3P21860 1342 aa12.86□□□□□ -0.35
CPNE1-218ENST00000439806 NPHP3Q7Z494 1330 aa12.86□□□□□ -0.35
CPNE1-218ENST00000439806 XIRP1Q702N8 1843 aaKnown RBP12.85□□□□□ -0.35
CPNE1-218ENST00000439806 IBTKQ9P2D0 1353 aaPredicted RBP12.85□□□□□ -0.35
CPNE1-218ENST00000439806 PDE1AP54750 535 aa12.85□□□□□ -0.35
CPNE1-218ENST00000439806 CADPS2Q86UW7 1296 aa12.85□□□□□ -0.35
CPNE1-218ENST00000439806 USP44Q9H0E7 712 aa12.85□□□□□ -0.35
CPNE1-218ENST00000439806 OSBPL3Q9H4L5 887 aa12.85□□□□□ -0.35
CPNE1-218ENST00000439806 NLRP2Q9NX02 1062 aa12.85□□□□□ -0.35
CPNE1-218ENST00000439806 DBF4Q9UBU7 674 aaPredicted RBP12.85□□□□□ -0.35
CPNE1-218ENST00000439806 AXIN2Q9Y2T1 843 aa12.85□□□□□ -0.35
CPNE1-218ENST00000439806 C5P01031 1676 aa12.84□□□□□ -0.35
CPNE1-218ENST00000439806 PNMA6EA0A0J9YXQ4 647 aa12.84□□□□□ -0.35
CPNE1-218ENST00000439806 HSP90AA1P07900 732 aaKnown RBP12.84□□□□□ -0.35
CPNE1-218ENST00000439806 CSB-PGBD3P0DP91 1061 aa12.84□□□□□ -0.35
CPNE1-218ENST00000439806 SPG7Q9UQ90 795 aa12.84□□□□□ -0.35
CPNE1-218ENST00000439806 PKD1L3Q7Z443 1732 aa12.83□□□□□ -0.36
CPNE1-218ENST00000439806 RAB11FIP3O75154 756 aa12.83□□□□□ -0.36
CPNE1-218ENST00000439806 REC8O95072 547 aa12.83□□□□□ -0.36
CPNE1-218ENST00000439806 RABEP1Q15276 862 aa12.83□□□□□ -0.36
CPNE1-218ENST00000439806 KIF2CQ99661 725 aa12.83□□□□□ -0.36
CPNE1-218ENST00000439806 PI4KAP2A4QPH2 592 aa12.82□□□□□ -0.36
CPNE1-218ENST00000439806 K7ELQ4 463 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-218ENST00000439806 ERC2O15083 957 aa12.82□□□□□ -0.36
CPNE1-218ENST00000439806 ANXA1P04083 346 aa12.82□□□□□ -0.36
CPNE1-218ENST00000439806 MX1P20591 662 aa12.82□□□□□ -0.36
CPNE1-218ENST00000439806 BEND3Q5T5X7 828 aa12.82□□□□□ -0.36
CPNE1-218ENST00000439806 PI4KAP1Q8N8J0 262 aa12.82□□□□□ -0.36
CPNE1-218ENST00000439806 DDX17Q92841 729 aaKnown RBP12.82□□□□□ -0.36
CPNE1-218ENST00000439806 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-218ENST00000439806 HDAC5Q9UQL6 1122 aa12.82□□□□□ -0.36
CPNE1-218ENST00000439806 AOX1Q06278 1338 aa12.82□□□□□ -0.36
CPNE1-218ENST00000439806 PARP4Q9UKK3 1724 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms