RNA–Protein interactions for RNA: ENST00000437733.5

TRAPPC12-208, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 518 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-208ENST00000437733 WNT2BQ93097 391 aa8.36□□□□□ -1.07
TRAPPC12-208ENST00000437733 ADGRL3Q9HAR2 1447 aa8.36□□□□□ -1.07
TRAPPC12-208ENST00000437733 PTPN5P54829 565 aa8.35□□□□□ -1.07
TRAPPC12-208ENST00000437733 PDE3BQ13370 1112 aa8.35□□□□□ -1.07
TRAPPC12-208ENST00000437733 C6orf132Q5T0Z8 1188 aa8.35□□□□□ -1.07
TRAPPC12-208ENST00000437733 NME9Q86XW9 330 aa8.35□□□□□ -1.07
TRAPPC12-208ENST00000437733 COG3Q96JB2 828 aa8.35□□□□□ -1.07
TRAPPC12-208ENST00000437733 SALL2Q9Y467 1007 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC12-208ENST00000437733 USP6P35125 1406 aa8.35□□□□□ -1.07
TRAPPC12-208ENST00000437733 TTC21BQ7Z4L5 1316 aa8.34□□□□□ -1.07
TRAPPC12-208ENST00000437733 GOLGA8CPA6NN73 597 aa8.34□□□□□ -1.07
TRAPPC12-208ENST00000437733 NGDNQ8NEJ9 315 aaKnown RBP8.34□□□□□ -1.07
TRAPPC12-208ENST00000437733 ARHGEF1Q92888 912 aaKnown RBP8.34□□□□□ -1.07
TRAPPC12-208ENST00000437733 NUDCQ9Y266 331 aa8.34□□□□□ -1.07
TRAPPC12-208ENST00000437733 ARIH1Q9Y4X5 557 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC12-208ENST00000437733 TTC21AQ8NDW8 1320 aa8.33□□□□□ -1.08
TRAPPC12-208ENST00000437733 COL3A1P02461 1466 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC12-208ENST00000437733 ONECUT3O60422 494 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC12-208ENST00000437733 PROSER2Q86WR7 435 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC12-208ENST00000437733 CCDC146Q8IYE0 955 aa8.33□□□□□ -1.08
TRAPPC12-208ENST00000437733 PMFBP1Q8TBY8 1022 aa8.33□□□□□ -1.08
TRAPPC12-208ENST00000437733 DDX12PQ92771 950 aa8.33□□□□□ -1.08
TRAPPC12-208ENST00000437733 STRCP1A6NGW2 1772 aa8.33□□□□□ -1.08
TRAPPC12-208ENST00000437733 STRCQ7RTU9 1775 aa8.33□□□□□ -1.08
TRAPPC12-208ENST00000437733 LMTK3Q96Q04 1460 aa8.32□□□□□ -1.08
TRAPPC12-208ENST00000437733 TESPA1A2RU30 521 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC12-208ENST00000437733 SPDYE16A6NNV3 312 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC12-208ENST00000437733 HSPA2P54652 639 aa8.32□□□□□ -1.08
TRAPPC12-208ENST00000437733 IFFO2Q5TF58 517 aa8.32□□□□□ -1.08
TRAPPC12-208ENST00000437733 LAPTM4BQ86VI4 370 aa8.32□□□□□ -1.08
TRAPPC12-208ENST00000437733 NGEFQ8N5V2 710 aa8.32□□□□□ -1.08
TRAPPC12-208ENST00000437733 KCTD17Q8N5Z5 321 aa8.32□□□□□ -1.08
TRAPPC12-208ENST00000437733 IL27Q8NEV9 243 aa8.32□□□□□ -1.08
TRAPPC12-208ENST00000437733 SUPT16HQ9Y5B9 1047 aaKnown RBP8.32□□□□□ -1.08
TRAPPC12-208ENST00000437733 AATKQ6ZMQ8 1374 aa8.32□□□□□ -1.08
TRAPPC12-208ENST00000437733 CDK12Q9NYV4 1490 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC12-208ENST00000437733 PIK3C2AO00443 1686 aa8.31□□□□□ -1.08
TRAPPC12-208ENST00000437733 USP54Q70EL1 1684 aa8.31□□□□□ -1.08
TRAPPC12-208ENST00000437733 OVOS2A0A0J9YW53 1432 aa8.31□□□□□ -1.08
TRAPPC12-208ENST00000437733 OVOS2Q6IE36 1432 aa8.31□□□□□ -1.08
TRAPPC12-208ENST00000437733 SSH2Q76I76 1423 aa8.31□□□□□ -1.08
TRAPPC12-208ENST00000437733 PPM1GO15355 546 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC12-208ENST00000437733 DIAPH1O60610 1272 aaKnown RBP8.31□□□□□ -1.08
TRAPPC12-208ENST00000437733 U2AF1L5P0DN76 240 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC12-208ENST00000437733 U2AF1Q01081 240 aaKnown RBP eCLIP8.31□□□□□ -1.08
TRAPPC12-208ENST00000437733 BARGINQ6ZT62 677 aa8.31□□□□□ -1.08
TRAPPC12-208ENST00000437733 RUNDC1Q96C34 613 aa8.31□□□□□ -1.08
TRAPPC12-208ENST00000437733 RBM33Q96EV2 1170 aaKnown RBP8.31□□□□□ -1.08
TRAPPC12-208ENST00000437733 KIAA1468Q9P260 1216 aa8.31□□□□□ -1.08
TRAPPC12-208ENST00000437733 POLKQ9UBT6 870 aa8.31□□□□□ -1.08
TRAPPC12-208ENST00000437733 KIF1AQ12756 1690 aa8.3□□□□□ -1.08
TRAPPC12-208ENST00000437733 TRIM6-TRIM34B2RNG4 842 aa8.3□□□□□ -1.08
TRAPPC12-208ENST00000437733 APAF1O14727 1248 aa8.3□□□□□ -1.08
TRAPPC12-208ENST00000437733 U2SURPO15042 1029 aaKnown RBP8.3□□□□□ -1.08
TRAPPC12-208ENST00000437733 EN1Q05925 392 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC12-208ENST00000437733 E2F4Q16254 413 aa8.3□□□□□ -1.08
TRAPPC12-208ENST00000437733 PNPLA6Q8IY17 1366 aa8.3□□□□□ -1.08
TRAPPC12-208ENST00000437733 MARF1Q9Y4F3 1742 aaKnown RBP8.29□□□□□ -1.08
TRAPPC12-208ENST00000437733 IGSF3O75054 1194 aa8.29□□□□□ -1.08
TRAPPC12-208ENST00000437733 HMGB1P09429 215 aaKnown RBP8.29□□□□□ -1.08
TRAPPC12-208ENST00000437733 ESCO1Q5FWF5 840 aa8.29□□□□□ -1.08
TRAPPC12-208ENST00000437733 ANKK1Q8NFD2 765 aa8.29□□□□□ -1.08
TRAPPC12-208ENST00000437733 PNNQ9H307 717 aaKnown RBP8.29□□□□□ -1.08
TRAPPC12-208ENST00000437733 EMILIN1Q9Y6C2 1016 aa8.29□□□□□ -1.08
TRAPPC12-208ENST00000437733 USP31Q70CQ4 1352 aa8.29□□□□□ -1.08
TRAPPC12-208ENST00000437733 IQSEC2Q5JU85 1478 aa8.29□□□□□ -1.08
TRAPPC12-208ENST00000437733 NCOA3Q9Y6Q9 1424 aa8.29□□□□□ -1.08
TRAPPC12-208ENST00000437733 RAD21O60216 631 aa8.28□□□□□ -1.08
TRAPPC12-208ENST00000437733 FBLN1P23142 703 aa8.28□□□□□ -1.08
TRAPPC12-208ENST00000437733 CDCA7LQ96GN5 454 aa8.28□□□□□ -1.08
TRAPPC12-208ENST00000437733 AK7Q96M32 723 aa8.28□□□□□ -1.08
TRAPPC12-208ENST00000437733 TRAIPQ9BWF2 469 aa8.28□□□□□ -1.08
TRAPPC12-208ENST00000437733 C19orf44Q9H6X5 657 aa8.28□□□□□ -1.08
TRAPPC12-208ENST00000437733 GPBP1L1Q9HC44 474 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC12-208ENST00000437733 XIRP1Q702N8 1843 aaKnown RBP8.28□□□□□ -1.08
TRAPPC12-208ENST00000437733 LRRC7Q96NW7 1537 aa8.28□□□□□ -1.08
TRAPPC12-208ENST00000437733 ZNF521Q96K83 1311 aa8.28□□□□□ -1.08
TRAPPC12-208ENST00000437733 MAPK8IP3Q9UPT6 1336 aa8.28□□□□□ -1.08
TRAPPC12-208ENST00000437733 TMEM94Q12767 1356 aa8.27□□□□□ -1.09
TRAPPC12-208ENST00000437733 PEAK1Q9H792 1746 aa8.27□□□□□ -1.09
TRAPPC12-208ENST00000437733 SOWAHBA6NEL2 793 aa8.27□□□□□ -1.09
TRAPPC12-208ENST00000437733 ATF3P18847 181 aa8.27□□□□□ -1.09
TRAPPC12-208ENST00000437733 PRIM1P49642 420 aaKnown RBP8.27□□□□□ -1.09
TRAPPC12-208ENST00000437733 PSME1Q06323 249 aa8.27□□□□□ -1.09
TRAPPC12-208ENST00000437733 RRS1Q15050 365 aaKnown RBP8.27□□□□□ -1.09
TRAPPC12-208ENST00000437733 TSR1Q2NL82 804 aaKnown RBP8.27□□□□□ -1.09
TRAPPC12-208ENST00000437733 TCP11L2Q8N4U5 519 aa8.27□□□□□ -1.09
TRAPPC12-208ENST00000437733 RGS22Q8NE09 1264 aa8.27□□□□□ -1.09
TRAPPC12-208ENST00000437733 ZFRQ96KR1 1074 aaKnown RBP8.27□□□□□ -1.09
TRAPPC12-208ENST00000437733 DCCP43146 1447 aa8.27□□□□□ -1.09
TRAPPC12-208ENST00000437733 C1orf167Q5SNV9 1468 aa8.26□□□□□ -1.09
TRAPPC12-208ENST00000437733 NEFMP07197 916 aa8.26□□□□□ -1.09
TRAPPC12-208ENST00000437733 BCAMP50895 628 aa8.26□□□□□ -1.09
TRAPPC12-208ENST00000437733 ABTB2Q8N961 1025 aa8.26□□□□□ -1.09
TRAPPC12-208ENST00000437733 SEPT9Q9UHD8 586 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC12-208ENST00000437733 RCAN3Q9UKA8 241 aa8.26□□□□□ -1.09
TRAPPC12-208ENST00000437733 LTN1O94822 1766 aa8.25□□□□□ -1.09
TRAPPC12-208ENST00000437733 MSH6P52701 1360 aa8.25□□□□□ -1.09
TRAPPC12-208ENST00000437733 E9PSI1 815 aa8.25□□□□□ -1.09
TRAPPC12-208ENST00000437733 SEMA3EO15041 775 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms