RNA–Protein interactions for RNA: ENST00000435331.3

HCG2040054-201, humanhuman

TSL 3 BASIC

Gene HCG2040054, Length 434 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG2040054-201ENST00000435331 GTF3C3Q9Y5Q9 886 aa5.21□□□□□ -1.58
HCG2040054-201ENST00000435331 PTPRCP08575 1304 aa5.21□□□□□ -1.58
HCG2040054-201ENST00000435331 ERBB4Q15303 1308 aa5.21□□□□□ -1.58
HCG2040054-201ENST00000435331 SENP3-EIF4A1A0A087X0R7 540 aa5.2□□□□□ -1.58
HCG2040054-201ENST00000435331 ZBTB7BO15156 539 aaPredicted RBP5.2□□□□□ -1.58
HCG2040054-201ENST00000435331 RGL2O15211 777 aa5.2□□□□□ -1.58
HCG2040054-201ENST00000435331 KCNQ3O43525 872 aa5.2□□□□□ -1.58
HCG2040054-201ENST00000435331 RBM6P78332 1123 aaKnown RBP5.2□□□□□ -1.58
HCG2040054-201ENST00000435331 PDIA6Q15084 440 aa5.2□□□□□ -1.58
HCG2040054-201ENST00000435331 SMARCC1Q92922 1105 aaPredicted RBP5.2□□□□□ -1.58
HCG2040054-201ENST00000435331 C8orf37Q96NL8 207 aa5.2□□□□□ -1.58
HCG2040054-201ENST00000435331 FMNL2Q96PY5 1086 aa5.2□□□□□ -1.58
HCG2040054-201ENST00000435331 DDX21Q9NR30 783 aaKnown RBP eCLIP5.2□□□□□ -1.58
HCG2040054-201ENST00000435331 ATG3Q9NT62 314 aa5.2□□□□□ -1.58
HCG2040054-201ENST00000435331 HYPKQ9NX55 129 aa5.2□□□□□ -1.58
HCG2040054-201ENST00000435331 PPP4R2Q9NY27 417 aa5.2□□□□□ -1.58
HCG2040054-201ENST00000435331 PEAK1Q9H792 1746 aa5.2□□□□□ -1.58
HCG2040054-201ENST00000435331 NHSL1Q5SYE7 1610 aa5.19□□□□□ -1.58
HCG2040054-201ENST00000435331 RGPD8O14715 1765 aaPredicted RBP5.19□□□□□ -1.58
HCG2040054-201ENST00000435331 COL18A1P39060 1754 aa5.19□□□□□ -1.58
HCG2040054-201ENST00000435331 ELL2O00472 640 aaPredicted RBP5.19□□□□□ -1.58
HCG2040054-201ENST00000435331 NEFLP07196 543 aa5.19□□□□□ -1.58
HCG2040054-201ENST00000435331 PRIM1P49642 420 aaKnown RBP5.19□□□□□ -1.58
HCG2040054-201ENST00000435331 TRIM28Q13263 835 aaKnown RBP5.19□□□□□ -1.58
HCG2040054-201ENST00000435331 FKBP8Q14318 412 aa5.19□□□□□ -1.58
HCG2040054-201ENST00000435331 LRP10Q7Z4F1 713 aa5.19□□□□□ -1.58
HCG2040054-201ENST00000435331 DZIP1LQ8IYY4 767 aaKnown RBP5.19□□□□□ -1.58
HCG2040054-201ENST00000435331 ZNF496Q96IT1 587 aaPredicted RBP5.19□□□□□ -1.58
HCG2040054-201ENST00000435331 USP35Q9P2H5 1018 aa5.19□□□□□ -1.58
HCG2040054-201ENST00000435331 USP16Q9Y5T5 823 aa5.19□□□□□ -1.58
HCG2040054-201ENST00000435331 ANKRD26Q9UPS8 1709 aa5.19□□□□□ -1.58
HCG2040054-201ENST00000435331 AFF2P51816 1311 aa5.19□□□□□ -1.58
HCG2040054-201ENST00000435331 KIF16BQ96L93 1317 aa5.19□□□□□ -1.58
HCG2040054-201ENST00000435331 COL22A1Q8NFW1 1626 aaPredicted RBP5.19□□□□□ -1.58
HCG2040054-201ENST00000435331 SHPRHQ149N8 1683 aa5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 ROBO1Q9Y6N7 1651 aa5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 RGPD1P0DJD0 1748 aa5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 STARD3NLO95772 234 aa5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 TRIM27P14373 513 aa5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 FAM98CQ17RN3 349 aaKnown RBP5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 RC3H1Q5TC82 1133 aaKnown RBP5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 MEX3CQ5U5Q3 659 aaKnown RBP5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 KSR2Q6VAB6 950 aa5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 FAM196AQ6ZSG2 479 aa5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 SEPT12Q8IYM1 358 aa5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 TTC5Q8N0Z6 440 aa5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 STK31Q9BXU1 1019 aa5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 BCL11BQ9C0K0 894 aaPredicted RBP5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 SMC4Q9NTJ3 1288 aa5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 ZBTB40Q9NUA8 1239 aa5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 TMOD3Q9NYL9 352 aa5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 DDX19BQ9UMR2 479 aa5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 HDAC5Q9UQL6 1122 aa5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 COL16A1Q07092 1604 aaPredicted RBP5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 MAP2P11137 1827 aaKnown RBP5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 LMO7Q8WWI1 1683 aa5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 MEGF6O75095 1541 aa5.18□□□□□ -1.58
HCG2040054-201ENST00000435331 ATRNO75882 1429 aa5.17□□□□□ -1.58
HCG2040054-201ENST00000435331 PLIN1O60240 522 aa5.17□□□□□ -1.58
HCG2040054-201ENST00000435331 RXRBP28702 533 aa5.17□□□□□ -1.58
HCG2040054-201ENST00000435331 CCT4P50991 539 aaKnown RBP5.17□□□□□ -1.58
HCG2040054-201ENST00000435331 FLIIQ13045 1269 aa5.17□□□□□ -1.58
HCG2040054-201ENST00000435331 SLC39A6Q13433 755 aa5.17□□□□□ -1.58
HCG2040054-201ENST00000435331 MVPQ14764 893 aaKnown RBP5.17□□□□□ -1.58
HCG2040054-201ENST00000435331 KRT24Q2M2I5 525 aa5.17□□□□□ -1.58
HCG2040054-201ENST00000435331 C20orf194Q5TEA3 1177 aa5.17□□□□□ -1.58
HCG2040054-201ENST00000435331 HDGFL1Q5TGJ6 251 aa5.17□□□□□ -1.58
HCG2040054-201ENST00000435331 RPAP2Q8IXW5 612 aaPredicted RBP5.17□□□□□ -1.58
HCG2040054-201ENST00000435331 RGS17Q9UGC6 210 aaPredicted RBP5.17□□□□□ -1.58
HCG2040054-201ENST00000435331 ASAP1Q9ULH1 1129 aa5.17□□□□□ -1.58
HCG2040054-201ENST00000435331 CCDC9Q9Y3X0 531 aaKnown RBP5.17□□□□□ -1.58
HCG2040054-201ENST00000435331 MARF1Q9Y4F3 1742 aaKnown RBP5.17□□□□□ -1.58
HCG2040054-201ENST00000435331 KIF20BQ96Q89 1820 aa5.16□□□□□ -1.58
HCG2040054-201ENST00000435331 KDM6AO15550 1401 aaPredicted RBP5.16□□□□□ -1.58
HCG2040054-201ENST00000435331 ERVV-1B6SEH8 477 aa5.16□□□□□ -1.58
HCG2040054-201ENST00000435331 PLSCR1O15162 318 aa5.16□□□□□ -1.58
HCG2040054-201ENST00000435331 ALDH1L1O75891 902 aa5.16□□□□□ -1.58
HCG2040054-201ENST00000435331 CYP19A1P11511 503 aaPredicted RBP5.16□□□□□ -1.58
HCG2040054-201ENST00000435331 RLBP1P12271 317 aa5.16□□□□□ -1.58
HCG2040054-201ENST00000435331 HDAC1Q13547 482 aaPredicted RBP5.16□□□□□ -1.58
HCG2040054-201ENST00000435331 BEND3Q5T5X7 828 aa5.16□□□□□ -1.58
HCG2040054-201ENST00000435331 ANKRD13DQ6ZTN6 518 aa5.16□□□□□ -1.58
HCG2040054-201ENST00000435331 EXOC6Q8TAG9 804 aa5.16□□□□□ -1.58
HCG2040054-201ENST00000435331 FRAT1Q92837 279 aaPredicted RBP5.16□□□□□ -1.58
HCG2040054-201ENST00000435331 SLC4A9Q96Q91 983 aa5.16□□□□□ -1.58
HCG2040054-201ENST00000435331 ABCC4O15439 1325 aa5.16□□□□□ -1.58
HCG2040054-201ENST00000435331 LOC102724428A0A0B4J2F2 783 aa5.15□□□□□ -1.59
HCG2040054-201ENST00000435331 NBPF26B4DH59 902 aa5.15□□□□□ -1.59
HCG2040054-201ENST00000435331 DDX58O95786 925 aaKnown RBP5.15□□□□□ -1.59
HCG2040054-201ENST00000435331 EIF2S2P20042 333 aaKnown RBP5.15□□□□□ -1.59
HCG2040054-201ENST00000435331 IL6STP40189 918 aaPredicted RBP5.15□□□□□ -1.59
HCG2040054-201ENST00000435331 EIF5P55010 431 aaKnown RBP5.15□□□□□ -1.59
HCG2040054-201ENST00000435331 SIK1P57059 783 aa5.15□□□□□ -1.59
HCG2040054-201ENST00000435331 CACNB1Q02641 598 aaPredicted RBP5.15□□□□□ -1.59
HCG2040054-201ENST00000435331 SLC27A3Q5K4L6 730 aa5.15□□□□□ -1.59
HCG2040054-201ENST00000435331 NBPF14Q5TI25 921 aa5.15□□□□□ -1.59
HCG2040054-201ENST00000435331 NBPF10Q6P3W6 841 aaKnown RBP5.15□□□□□ -1.59
HCG2040054-201ENST00000435331 INTS5Q6P9B9 1019 aaKnown RBP5.15□□□□□ -1.59
HCG2040054-201ENST00000435331 CLEC4GQ6UXB4 293 aa5.15□□□□□ -1.59
HCG2040054-201ENST00000435331 COPS6Q7L5N1 327 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms