RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 ZNF530Q6P9A1 599 aaPredicted RBP29.63■■■□□ 2.33
MBD3-202ENST00000434436 RGPD5Q99666 1765 aa29.62■■■□□ 2.33
MBD3-202ENST00000434436 C16orf71Q8IYS4 520 aaPredicted RBP29.62■■■□□ 2.33
MBD3-202ENST00000434436 N4BP2Q86UW6 1770 aaPredicted RBP29.62■■■□□ 2.33
MBD3-202ENST00000434436 GSPT1P15170 499 aaKnown RBP29.61■■■□□ 2.33
MBD3-202ENST00000434436 EIF4A1P60842 406 aaKnown RBP29.61■■■□□ 2.33
MBD3-202ENST00000434436 PXDNQ92626 1479 aa29.61■■■□□ 2.33
MBD3-202ENST00000434436 TMEM94Q12767 1356 aa29.6■■■□□ 2.33
MBD3-202ENST00000434436 HDGFL1Q5TGJ6 251 aa29.6■■■□□ 2.33
MBD3-202ENST00000434436 RBM25P49756 843 aaKnown RBP29.59■■■□□ 2.33
MBD3-202ENST00000434436 AMOTQ4VCS5 1084 aa29.59■■■□□ 2.33
MBD3-202ENST00000434436 TBC1D9Q6ZT07 1266 aa29.59■■■□□ 2.33
MBD3-202ENST00000434436 MPRIPQ6WCQ1 1025 aa29.58■■■□□ 2.33
MBD3-202ENST00000434436 KCNQ3O43525 872 aa29.57■■■□□ 2.32
MBD3-202ENST00000434436 OTUD7AQ8TE49 926 aaPredicted RBP29.57■■■□□ 2.32
MBD3-202ENST00000434436 SMARCA5O60264 1052 aaPredicted RBP29.57■■■□□ 2.32
MBD3-202ENST00000434436 GNAI2P04899 355 aa29.57■■■□□ 2.32
MBD3-202ENST00000434436 ATF3P18847 181 aa29.57■■■□□ 2.32
MBD3-202ENST00000434436 HMMRO75330 724 aa29.56■■■□□ 2.32
MBD3-202ENST00000434436 PHAXQ9H814 394 aaKnown RBP29.56■■■□□ 2.32
MBD3-202ENST00000434436 PXDNLA1KZ92 1463 aa29.56■■■□□ 2.32
MBD3-202ENST00000434436 TTC22Q5TAA0 569 aa29.55■■■□□ 2.32
MBD3-202ENST00000434436 BCL11AQ9H165 835 aa29.55■■■□□ 2.32
MBD3-202ENST00000434436 SLKQ9H2G2 1235 aaPredicted RBP29.55■■■□□ 2.32
MBD3-202ENST00000434436 ANTXR1Q9H6X2 564 aa29.55■■■□□ 2.32
MBD3-202ENST00000434436 RNMTO43148 476 aaKnown RBP29.55■■■□□ 2.32
MBD3-202ENST00000434436 TEFQ10587 303 aa29.55■■■□□ 2.32
MBD3-202ENST00000434436 DDX17Q92841 729 aaKnown RBP29.55■■■□□ 2.32
MBD3-202ENST00000434436 APBB1O00213 710 aa29.54■■■□□ 2.32
MBD3-202ENST00000434436 DCCP43146 1447 aa29.53■■■□□ 2.32
MBD3-202ENST00000434436 GNAI3P08754 354 aa29.53■■■□□ 2.32
MBD3-202ENST00000434436 ZC3H6P61129 1189 aaKnown RBP29.53■■■□□ 2.32
MBD3-202ENST00000434436 BTBD11A6QL63 1104 aa29.53■■■□□ 2.32
MBD3-202ENST00000434436 CDC45O75419 566 aa29.53■■■□□ 2.32
MBD3-202ENST00000434436 HOXB7P09629 217 aa29.53■■■□□ 2.32
MBD3-202ENST00000434436 EIF2S2P20042 333 aaKnown RBP29.53■■■□□ 2.32
MBD3-202ENST00000434436 C1orf141Q5JVX7 400 aa29.52■■■□□ 2.32
MBD3-202ENST00000434436 ERBB3P21860 1342 aa29.52■■■□□ 2.32
MBD3-202ENST00000434436 FRAT2O75474 233 aaPredicted RBP29.51■■■□□ 2.31
MBD3-202ENST00000434436 OVOS2A0A0G2JMS6 1433 aa29.51■■■□□ 2.31
MBD3-202ENST00000434436 NCOA3Q9Y6Q9 1424 aa29.51■■■□□ 2.31
MBD3-202ENST00000434436 USP44Q9H0E7 712 aa29.49■■■□□ 2.31
MBD3-202ENST00000434436 CHPF2Q9P2E5 772 aa29.49■■■□□ 2.31
MBD3-202ENST00000434436 SIPA1L3O60292 1781 aaPredicted RBP29.48■■■□□ 2.31
MBD3-202ENST00000434436 ATP8B2P98198 1209 aa29.47■■■□□ 2.31
MBD3-202ENST00000434436 PNMA6EA0A0J9YXQ4 647 aa29.47■■■□□ 2.31
MBD3-202ENST00000434436 KIF2CQ99661 725 aa29.47■■■□□ 2.31
MBD3-202ENST00000434436 LRRFIP2Q9Y608 721 aaKnown RBP29.46■■■□□ 2.31
MBD3-202ENST00000434436 COL18A1P39060 1754 aa29.46■■■□□ 2.31
MBD3-202ENST00000434436 ADAMTS7Q9UKP4 1686 aa29.46■■■□□ 2.31
MBD3-202ENST00000434436 EXOC6BQ9Y2D4 811 aa29.45■■■□□ 2.31
MBD3-202ENST00000434436 HSPA2P54652 639 aa29.45■■■□□ 2.3
MBD3-202ENST00000434436 CRYBG1Q9Y4K1 1723 aa29.44■■■□□ 2.3
MBD3-202ENST00000434436 LMTK3Q96Q04 1460 aa29.44■■■□□ 2.3
MBD3-202ENST00000434436 SDSP20132 328 aa29.43■■■□□ 2.3
MBD3-202ENST00000434436 CADPS2Q86UW7 1296 aa29.43■■■□□ 2.3
MBD3-202ENST00000434436 SPRYD3Q8NCJ5 442 aa29.43■■■□□ 2.3
MBD3-202ENST00000434436 CHMP4AQ9BY43 222 aa29.43■■■□□ 2.3
MBD3-202ENST00000434436 HEG1Q9ULI3 1381 aa29.42■■■□□ 2.3
MBD3-202ENST00000434436 ANXA1P04083 346 aa29.42■■■□□ 2.3
MBD3-202ENST00000434436 HSCBQ8IWL3 235 aa29.42■■■□□ 2.3
MBD3-202ENST00000434436 SNX21Q969T3 373 aa29.42■■■□□ 2.3
MBD3-202ENST00000434436 NPHP3Q7Z494 1330 aa29.41■■■□□ 2.3
MBD3-202ENST00000434436 UBTFL1P0CB47 393 aaPredicted RBP29.41■■■□□ 2.3
MBD3-202ENST00000434436 CABLES1Q8TDN4 633 aa29.41■■■□□ 2.3
MBD3-202ENST00000434436 SRCIN1Q9C0H9 1055 aa29.41■■■□□ 2.3
MBD3-202ENST00000434436 OSBPL3Q9H4L5 887 aa29.41■■■□□ 2.3
MBD3-202ENST00000434436 TNS3Q68CZ2 1445 aa29.4■■■□□ 2.3
MBD3-202ENST00000434436 XIRP1Q702N8 1843 aaKnown RBP29.4■■■□□ 2.3
MBD3-202ENST00000434436 GIGYF1O75420 1035 aaPredicted RBP29.4■■■□□ 2.3
MBD3-202ENST00000434436 PI4KAP2A4QPH2 592 aa29.39■■■□□ 2.3
MBD3-202ENST00000434436 PI4KAP1Q8N8J0 262 aa29.39■■■□□ 2.3
MBD3-202ENST00000434436 NLRP2Q9NX02 1062 aa29.39■■■□□ 2.3
MBD3-202ENST00000434436 IBTKQ9P2D0 1353 aaPredicted RBP29.39■■■□□ 2.3
MBD3-202ENST00000434436 PDE1AP54750 535 aa29.39■■■□□ 2.29
MBD3-202ENST00000434436 BEND3Q5T5X7 828 aa29.39■■■□□ 2.29
MBD3-202ENST00000434436 DNAAF4Q8WXU2 420 aa29.39■■■□□ 2.29
MBD3-202ENST00000434436 SALL3Q9BXA9 1300 aa29.38■■■□□ 2.29
MBD3-202ENST00000434436 LRRCC1Q9C099 1032 aa29.37■■■□□ 2.29
MBD3-202ENST00000434436 ADCY9O60503 1353 aa29.37■■■□□ 2.29
MBD3-202ENST00000434436 RAPGEF4Q8WZA2 1011 aa29.37■■■□□ 2.29
MBD3-202ENST00000434436 DBF4Q9UBU7 674 aaPredicted RBP29.36■■■□□ 2.29
MBD3-202ENST00000434436 SCN11AQ9UI33 1791 aa29.36■■■□□ 2.29
MBD3-202ENST00000434436 PRAMEF22A3QJZ6 481 aa29.35■■■□□ 2.29
MBD3-202ENST00000434436 TUBGCP6Q96RT7 1819 aa29.35■■■□□ 2.29
MBD3-202ENST00000434436 SSH3Q8TE77 659 aa29.35■■■□□ 2.29
MBD3-202ENST00000434436 SPATA31A3Q5VYP0 1347 aa29.34■■■□□ 2.29
MBD3-202ENST00000434436 MEGF6O75095 1541 aa29.34■■■□□ 2.29
MBD3-202ENST00000434436 EIF5BO60841 1220 aaKnown RBP29.34■■■□□ 2.29
MBD3-202ENST00000434436 PROSER3Q2NL68 480 aa29.34■■■□□ 2.29
MBD3-202ENST00000434436 NBPF7P0C2Y1 421 aaPredicted RBP29.33■■■□□ 2.29
MBD3-202ENST00000434436 CHRNA2Q15822 529 aa29.33■■■□□ 2.29
MBD3-202ENST00000434436 KDM6AO15550 1401 aaPredicted RBP29.33■■■□□ 2.29
MBD3-202ENST00000434436 TATP17735 454 aaPredicted RBP29.33■■■□□ 2.29
MBD3-202ENST00000434436 RBM42Q9BTD8 480 aaKnown RBP29.32■■■□□ 2.28
MBD3-202ENST00000434436 USP26Q9BXU7 913 aa29.32■■■□□ 2.28
MBD3-202ENST00000434436 CD2BP2O95400 341 aaKnown RBP29.31■■■□□ 2.28
MBD3-202ENST00000434436 POLA2Q14181 598 aa29.31■■■□□ 2.28
MBD3-202ENST00000434436 PPP1R42Q7Z4L9 355 aa29.31■■■□□ 2.28
MBD3-202ENST00000434436 ABCC6O95255 1503 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms