RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 TRIM22Q8IYM9 498 aa7.23□□□□□ -1.25
CHD8-202ENST00000430710 KIF20AO95235 890 aa7.23□□□□□ -1.25
CHD8-202ENST00000430710 STK3Q13188 491 aa7.23□□□□□ -1.25
CHD8-202ENST00000430710 NOLC1Q14978 699 aaKnown RBP eCLIP7.23□□□□□ -1.252e-52■■■■■ 60.4
CHD8-202ENST00000430710 SYCP1Q15431 976 aa7.23□□□□□ -1.25
CHD8-202ENST00000430710 CCDC43Q96MW1 224 aaKnown RBP7.23□□□□□ -1.25
CHD8-202ENST00000430710 TOP1P11387 765 aaKnown RBP7.23□□□□□ -1.25
CHD8-202ENST00000430710 LMAN1P49257 510 aa7.23□□□□□ -1.25
CHD8-202ENST00000430710 UBE2HP62256 183 aa7.23□□□□□ -1.25
CHD8-202ENST00000430710 KIF4BQ2VIQ3 1234 aa7.23□□□□□ -1.25
CHD8-202ENST00000430710 NBPF8Q3BBV2 869 aa7.23□□□□□ -1.25
CHD8-202ENST00000430710 RAPGEF4Q8WZA2 1011 aa7.23□□□□□ -1.25
CHD8-202ENST00000430710 SMARCC1Q92922 1105 aaPredicted RBP7.23□□□□□ -1.25
CHD8-202ENST00000430710 CDK5RAP3Q96JB5 506 aa7.23□□□□□ -1.25
CHD8-202ENST00000430710 FEZ1Q99689 392 aa7.23□□□□□ -1.25
CHD8-202ENST00000430710 AQRO60306 1485 aaKnown RBP eCLIP7.23□□□□□ -1.256e-7■■■■■ 28.2
CHD8-202ENST00000430710 TAX1BP1Q86VP1 789 aa7.23□□□□□ -1.25
CHD8-202ENST00000430710 ZNF397Q8NF99 534 aaPredicted RBP7.23□□□□□ -1.25
CHD8-202ENST00000430710 GAS2L2Q8NHY3 880 aa7.23□□□□□ -1.25
CHD8-202ENST00000430710 MNAT1P51948 309 aa7.22□□□□□ -1.25
CHD8-202ENST00000430710 CAMK4Q16566 473 aa7.22□□□□□ -1.25
CHD8-202ENST00000430710 PRKAR2BP31323 418 aa7.22□□□□□ -1.25
CHD8-202ENST00000430710 GGNBP2Q9H3C7 697 aa7.22□□□□□ -1.25
CHD8-202ENST00000430710 TBC1D2BQ9UPU7 963 aa7.22□□□□□ -1.25
CHD8-202ENST00000430710 HECW1Q76N89 1606 aa7.22□□□□□ -1.25
CHD8-202ENST00000430710 TUBB4AP04350 444 aa7.22□□□□□ -1.25
CHD8-202ENST00000430710 CASTP20810 708 aaKnown RBP7.22□□□□□ -1.25
CHD8-202ENST00000430710 RBM5P52756 815 aaKnown RBP eCLIP7.22□□□□□ -1.25
CHD8-202ENST00000430710 CCDC150Q8NCX0 1101 aa7.22□□□□□ -1.25
CHD8-202ENST00000430710 CFTRP13569 1480 aa7.22□□□□□ -1.25
CHD8-202ENST00000430710 MAP2K1Q02750 393 aaPredicted RBP7.22□□□□□ -1.25
CHD8-202ENST00000430710 TMEM57Q8N5G2 664 aa7.22□□□□□ -1.25
CHD8-202ENST00000430710 NCOA1Q15788 1441 aa7.22□□□□□ -1.25
CHD8-202ENST00000430710 ABCC11Q96J66 1382 aa7.22□□□□□ -1.25
CHD8-202ENST00000430710 EZRP15311 586 aaKnown RBP7.22□□□□□ -1.25
CHD8-202ENST00000430710 ARFGAP3Q9NP61 516 aa7.22□□□□□ -1.25
CHD8-202ENST00000430710 STX1AQ16623 288 aa7.22□□□□□ -1.25
CHD8-202ENST00000430710 IPO4Q8TEX9 1081 aaKnown RBP7.22□□□□□ -1.25
CHD8-202ENST00000430710 GPRASP1Q5JY77 1395 aa7.21□□□□□ -1.25
CHD8-202ENST00000430710 ATP2B1P20020 1258 aa7.21□□□□□ -1.25
CHD8-202ENST00000430710 GBP2P32456 591 aaPredicted RBP7.21□□□□□ -1.25
CHD8-202ENST00000430710 TRMT1Q9NXH9 659 aaKnown RBP7.21□□□□□ -1.25
CHD8-202ENST00000430710 NOL7Q9UMY1 257 aaKnown RBP7.21□□□□□ -1.25
CHD8-202ENST00000430710 TSPOAP1O95153 1857 aa7.21□□□□□ -1.25
CHD8-202ENST00000430710 NESP48681 1621 aa7.21□□□□□ -1.26
CHD8-202ENST00000430710 TERF1P54274 439 aa7.21□□□□□ -1.26
CHD8-202ENST00000430710 TAF4BQ92750 862 aa7.21□□□□□ -1.26
CHD8-202ENST00000430710 CEP131Q9UPN4 1083 aa7.21□□□□□ -1.26
CHD8-202ENST00000430710 ALDH1L2Q3SY69 923 aa7.21□□□□□ -1.26
CHD8-202ENST00000430710 BMP2KLQ5H9B9 411 aa7.21□□□□□ -1.26
CHD8-202ENST00000430710 C20orf194Q5TEA3 1177 aa7.21□□□□□ -1.26
CHD8-202ENST00000430710 PANK2Q9BZ23 570 aa7.21□□□□□ -1.26
CHD8-202ENST00000430710 RNF187Q5TA31 235 aaPredicted RBP7.21□□□□□ -1.26
CHD8-202ENST00000430710 RARSP54136 660 aaKnown RBP7.21□□□□□ -1.26
CHD8-202ENST00000430710 TUBB4BP68371 445 aa7.21□□□□□ -1.26
CHD8-202ENST00000430710 FGD5Q6ZNL6 1462 aa7.2□□□□□ -1.26
CHD8-202ENST00000430710 SLC4A2P04920 1241 aa7.2□□□□□ -1.26
CHD8-202ENST00000430710 OGFRQ9NZT2 677 aa7.2□□□□□ -1.26
CHD8-202ENST00000430710 ZRANB1Q9UGI0 708 aa7.2□□□□□ -1.26
CHD8-202ENST00000430710 SYNJ1O43426 1573 aa7.2□□□□□ -1.26
CHD8-202ENST00000430710 EIF5P55010 431 aaKnown RBP7.2□□□□□ -1.26
CHD8-202ENST00000430710 SPA17Q15506 151 aa7.2□□□□□ -1.26
CHD8-202ENST00000430710 CWC27Q6UX04 472 aaKnown RBP7.2□□□□□ -1.26
CHD8-202ENST00000430710 TICAM2Q86XR7 235 aa7.2□□□□□ -1.26
CHD8-202ENST00000430710 SNX21Q969T3 373 aa7.2□□□□□ -1.26
CHD8-202ENST00000430710 SRRTQ9BXP5 876 aaKnown RBP7.2□□□□□ -1.26
CHD8-202ENST00000430710 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.2□□□□□ -1.263e-6■■■■■ 26.9
CHD8-202ENST00000430710 MAP3K1Q13233 1512 aa7.2□□□□□ -1.26
CHD8-202ENST00000430710 WASF1Q92558 559 aa7.2□□□□□ -1.26
CHD8-202ENST00000430710 LIMCH1Q9UPQ0 1083 aa7.2□□□□□ -1.26
CHD8-202ENST00000430710 FANCD2Q9BXW9 1451 aa7.2□□□□□ -1.26
CHD8-202ENST00000430710 SLC3A2P08195 630 aaKnown RBP7.2□□□□□ -1.26
CHD8-202ENST00000430710 NF2P35240 595 aa7.2□□□□□ -1.26
CHD8-202ENST00000430710 PAFAH1B1P43034 410 aa7.2□□□□□ -1.26
CHD8-202ENST00000430710 STK11IPQ8N1F8 1099 aa7.2□□□□□ -1.26
CHD8-202ENST00000430710 CTNNA3Q9UI47 895 aa7.2□□□□□ -1.26
CHD8-202ENST00000430710 AIMP1Q12904 312 aaKnown RBP7.19□□□□□ -1.26
CHD8-202ENST00000430710 TTC31Q49AM3 519 aaPredicted RBP7.19□□□□□ -1.26
CHD8-202ENST00000430710 RAB11FIP3O75154 756 aa7.19□□□□□ -1.26
CHD8-202ENST00000430710 ZNF165P49910 485 aa7.19□□□□□ -1.26
CHD8-202ENST00000430710 NBPF14Q5TI25 921 aa7.19□□□□□ -1.26
CHD8-202ENST00000430710 GAPVD1Q14C86 1478 aa7.19□□□□□ -1.26
CHD8-202ENST00000430710 RPGRIP1LQ68CZ1 1315 aa7.19□□□□□ -1.26
CHD8-202ENST00000430710 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.19□□□□□ -1.26
CHD8-202ENST00000430710 PTPN23Q9H3S7 1636 aa7.19□□□□□ -1.26
CHD8-202ENST00000430710 NAA15Q9BXJ9 866 aaKnown RBP7.19□□□□□ -1.26
CHD8-202ENST00000430710 CCDC175P0C221 793 aa7.19□□□□□ -1.26
CHD8-202ENST00000430710 CCDC91Q7Z6B0 441 aa7.19□□□□□ -1.26
CHD8-202ENST00000430710 RBM27Q9P2N5 1060 aaKnown RBP7.19□□□□□ -1.26
CHD8-202ENST00000430710 NCAPD3P42695 1498 aa7.19□□□□□ -1.26
CHD8-202ENST00000430710 CCDC69A6NI79 296 aa7.19□□□□□ -1.26
CHD8-202ENST00000430710 GIGYF2Q6Y7W6 1299 aaKnown RBP7.18□□□□□ -1.26
CHD8-202ENST00000430710 TANGO6Q9C0B7 1094 aa7.18□□□□□ -1.26
CHD8-202ENST00000430710 CABP2Q9NPB3 220 aa7.18□□□□□ -1.26
CHD8-202ENST00000430710 RAI14Q9P0K7 980 aa7.18□□□□□ -1.26
CHD8-202ENST00000430710 V9GYY5 206 aaPredicted RBP7.18□□□□□ -1.26
CHD8-202ENST00000430710 ZNF644Q9H582 1327 aaPredicted RBP7.18□□□□□ -1.26
CHD8-202ENST00000430710 GCOM1H8Y6P7 765 aaPredicted RBP7.18□□□□□ -1.26
CHD8-202ENST00000430710 STX6O43752 255 aa7.18□□□□□ -1.26
CHD8-202ENST00000430710 MYZAPP0CAP1 466 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms