RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 TBX22Q9Y458 520 aa16.39■□□□□ 0.21
SNRNP200-202ENST00000429650 FAM208AQ9UK61 1670 aaKnown RBP16.38■□□□□ 0.21
SNRNP200-202ENST00000429650 HTATSF1O43719 755 aaKnown RBP16.38■□□□□ 0.21
SNRNP200-202ENST00000429650 REC8O95072 547 aa16.38■□□□□ 0.21
SNRNP200-202ENST00000429650 GNAI2P04899 355 aa16.38■□□□□ 0.21
SNRNP200-202ENST00000429650 PDE1AP54750 535 aa16.38■□□□□ 0.21
SNRNP200-202ENST00000429650 GAS2L3Q86XJ1 694 aa16.38■□□□□ 0.21
SNRNP200-202ENST00000429650 STK31Q9BXU1 1019 aa16.38■□□□□ 0.21
SNRNP200-202ENST00000429650 BAG4O95429 457 aaKnown RBP16.37■□□□□ 0.21
SNRNP200-202ENST00000429650 GOLGA6L22H0YM25 854 aa16.37■□□□□ 0.21
SNRNP200-202ENST00000429650 KCNA4P22459 653 aa16.37■□□□□ 0.21
SNRNP200-202ENST00000429650 ERC2O15083 957 aa16.36■□□□□ 0.21
SNRNP200-202ENST00000429650 XRN1Q8IZH2 1706 aaKnown RBP16.36■□□□□ 0.21
SNRNP200-202ENST00000429650 FLIIQ13045 1269 aa16.36■□□□□ 0.21
SNRNP200-202ENST00000429650 CACNA1FO60840 1977 aa16.36■□□□□ 0.21
SNRNP200-202ENST00000429650 ST18O60284 1047 aa16.35■□□□□ 0.21
SNRNP200-202ENST00000429650 EXOC6BQ9Y2D4 811 aa16.35■□□□□ 0.21
SNRNP200-202ENST00000429650 MARF1Q9Y4F3 1742 aaKnown RBP16.35■□□□□ 0.21
SNRNP200-202ENST00000429650 TUBGCP6Q96RT7 1819 aa16.35■□□□□ 0.21
SNRNP200-202ENST00000429650 GNAT3A8MTJ3 354 aa16.35■□□□□ 0.21
SNRNP200-202ENST00000429650 CYP2E1P05181 493 aaPredicted RBP16.35■□□□□ 0.21
SNRNP200-202ENST00000429650 NLRP6P59044 892 aa16.35■□□□□ 0.21
SNRNP200-202ENST00000429650 NUCB2P80303 420 aa16.35■□□□□ 0.21
SNRNP200-202ENST00000429650 NWD1Q149M9 1564 aa16.35■□□□□ 0.21
SNRNP200-202ENST00000429650 CCDC30Q5VVM6 783 aa16.35■□□□□ 0.21
SNRNP200-202ENST00000429650 SALL3Q9BXA9 1300 aa16.35■□□□□ 0.21
SNRNP200-202ENST00000429650 HOXC9P31274 260 aa16.34■□□□□ 0.21
SNRNP200-202ENST00000429650 FKBP5Q13451 457 aaPredicted RBP16.34■□□□□ 0.21
SNRNP200-202ENST00000429650 GNAI3P08754 354 aa16.33■□□□□ 0.21
SNRNP200-202ENST00000429650 KLHL40Q2TBA0 621 aa16.33■□□□□ 0.21
SNRNP200-202ENST00000429650 DHX37Q8IY37 1157 aaKnown RBP16.33■□□□□ 0.21
SNRNP200-202ENST00000429650 N4BP2Q86UW6 1770 aaPredicted RBP16.33■□□□□ 0.2
SNRNP200-202ENST00000429650 CWC22Q9HCG8 908 aaKnown RBP16.33■□□□□ 0.2
SNRNP200-202ENST00000429650 LRRCC1Q9C099 1032 aa16.32■□□□□ 0.2
SNRNP200-202ENST00000429650 ANKARQ7Z5J8 1434 aa16.32■□□□□ 0.2
SNRNP200-202ENST00000429650 MAP3K5Q99683 1374 aa16.32■□□□□ 0.2
SNRNP200-202ENST00000429650 PNMA6EA0A0J9YXQ4 647 aa16.32■□□□□ 0.2
SNRNP200-202ENST00000429650 ATP8B2P98198 1209 aa16.32■□□□□ 0.2
SNRNP200-202ENST00000429650 PKP1Q13835 747 aa16.32■□□□□ 0.2
SNRNP200-202ENST00000429650 TSHZ3Q63HK5 1081 aa16.32■□□□□ 0.2
SNRNP200-202ENST00000429650 IL17REQ8NFR9 667 aa16.32■□□□□ 0.2
SNRNP200-202ENST00000429650 NECTIN2Q92692 538 aa16.32■□□□□ 0.2
SNRNP200-202ENST00000429650 DDX49Q9Y6V7 483 aaKnown RBP16.32■□□□□ 0.2
SNRNP200-202ENST00000429650 USP54Q70EL1 1684 aa16.32■□□□□ 0.2
SNRNP200-202ENST00000429650 SOS1Q07889 1333 aaPredicted RBP16.31■□□□□ 0.2
SNRNP200-202ENST00000429650 ZGPATQ8N5A5 531 aaKnown RBP16.31■□□□□ 0.2
SNRNP200-202ENST00000429650 IBTKQ9P2D0 1353 aaPredicted RBP16.31■□□□□ 0.2
SNRNP200-202ENST00000429650 MX1P20591 662 aa16.31■□□□□ 0.2
SNRNP200-202ENST00000429650 NUTM2GQ5VZR2 741 aa16.31■□□□□ 0.2
SNRNP200-202ENST00000429650 MCTP1Q6DN14 999 aa16.31■□□□□ 0.2
SNRNP200-202ENST00000429650 CLCN1P35523 988 aa16.3■□□□□ 0.2
SNRNP200-202ENST00000429650 TAF7Q15545 349 aaPredicted RBP16.3■□□□□ 0.2
SNRNP200-202ENST00000429650 BABAM1Q9NWV8 329 aa16.3■□□□□ 0.2
SNRNP200-202ENST00000429650 PXDNLA1KZ92 1463 aa16.29■□□□□ 0.2
SNRNP200-202ENST00000429650 ESYT1Q9BSJ8 1104 aa16.29■□□□□ 0.2
SNRNP200-202ENST00000429650 THEMISQ8N1K5 641 aaPredicted RBP16.29■□□□□ 0.2
SNRNP200-202ENST00000429650 LRRFIP2Q9Y608 721 aaKnown RBP16.29■□□□□ 0.2
SNRNP200-202ENST00000429650 TPRNQ4KMQ1 711 aa16.28■□□□□ 0.2
SNRNP200-202ENST00000429650 LMBRD1Q9NUN5 540 aa16.28■□□□□ 0.2
SNRNP200-202ENST00000429650 RBM33Q96EV2 1170 aaKnown RBP16.28■□□□□ 0.2
SNRNP200-202ENST00000429650 LTV1Q96GA3 475 aaPredicted RBP16.28■□□□□ 0.2
SNRNP200-202ENST00000429650 KCNA6P17658 529 aa16.27■□□□□ 0.2
SNRNP200-202ENST00000429650 ABTB2Q8N961 1025 aa16.27■□□□□ 0.2
SNRNP200-202ENST00000429650 USP44Q9H0E7 712 aa16.27■□□□□ 0.2
SNRNP200-202ENST00000429650 STAP2Q9UGK3 403 aa16.27■□□□□ 0.2
SNRNP200-202ENST00000429650 ZDHHC9Q9Y397 364 aa16.27■□□□□ 0.2
SNRNP200-202ENST00000429650 FER1L4A9Z1Z3 1794 aa16.26■□□□□ 0.19
SNRNP200-202ENST00000429650 CHMLP26374 656 aa16.26■□□□□ 0.19
SNRNP200-202ENST00000429650 NEK4P51957 841 aa16.26■□□□□ 0.19
SNRNP200-202ENST00000429650 SRCIN1Q9C0H9 1055 aa16.26■□□□□ 0.19
SNRNP200-202ENST00000429650 UBTFL1P0CB47 393 aaPredicted RBP16.25■□□□□ 0.19
SNRNP200-202ENST00000429650 HDGFL1Q5TGJ6 251 aa16.25■□□□□ 0.19
SNRNP200-202ENST00000429650 RILPL2Q969X0 211 aa16.25■□□□□ 0.19
SNRNP200-202ENST00000429650 ESPNB1AK53 854 aa16.25■□□□□ 0.19
SNRNP200-202ENST00000429650 TRIM6-TRIM34B2RNG4 842 aa16.25■□□□□ 0.19
SNRNP200-202ENST00000429650 ZNF445P59923 1031 aa16.25■□□□□ 0.19
SNRNP200-202ENST00000429650 USHBP1Q8N6Y0 703 aa16.25■□□□□ 0.19
SNRNP200-202ENST00000429650 TMX3Q96JJ7 454 aa16.25■□□□□ 0.19
SNRNP200-202ENST00000429650 ERBB4Q15303 1308 aa16.25■□□□□ 0.19
SNRNP200-202ENST00000429650 LTN1O94822 1766 aa16.24■□□□□ 0.19
SNRNP200-202ENST00000429650 MCCP23508 829 aa16.24■□□□□ 0.19
SNRNP200-202ENST00000429650 PALD1Q9ULE6 856 aa16.24■□□□□ 0.19
SNRNP200-202ENST00000429650 A0A0U1RQG5 324 aaPredicted RBP16.24■□□□□ 0.19
SNRNP200-202ENST00000429650 NASPP49321 788 aaPredicted RBP16.24■□□□□ 0.19
SNRNP200-202ENST00000429650 MCM2P49736 904 aa16.24■□□□□ 0.19
SNRNP200-202ENST00000429650 ANAPC15P60006 121 aa16.24■□□□□ 0.19
SNRNP200-202ENST00000429650 CAVIN1Q6NZI2 390 aaKnown RBP16.24■□□□□ 0.19
SNRNP200-202ENST00000429650 SSH3Q8TE77 659 aa16.24■□□□□ 0.19
SNRNP200-202ENST00000429650 TRIM44Q96DX7 344 aaPredicted RBP16.24■□□□□ 0.19
SNRNP200-202ENST00000429650 PHAXQ9H814 394 aaKnown RBP16.24■□□□□ 0.19
SNRNP200-202ENST00000429650 AOX1Q06278 1338 aa16.24■□□□□ 0.19
SNRNP200-202ENST00000429650 BRD2P25440 801 aaKnown RBP16.23■□□□□ 0.19
SNRNP200-202ENST00000429650 SAMD1Q6SPF0 538 aaPredicted RBP16.23■□□□□ 0.19
SNRNP200-202ENST00000429650 UNC5CLQ8IV45 518 aa16.23■□□□□ 0.19
SNRNP200-202ENST00000429650 ANO2Q9NQ90 1003 aa16.23■□□□□ 0.19
SNRNP200-202ENST00000429650 CEMIPQ8WUJ3 1361 aa16.23■□□□□ 0.19
SNRNP200-202ENST00000429650 NCLP19338 710 aaKnown RBP16.22■□□□□ 0.19
SNRNP200-202ENST00000429650 ZSCAN23Q3MJ62 389 aa16.22■□□□□ 0.19
SNRNP200-202ENST00000429650 PRPF40AO75400 957 aaKnown RBP16.22■□□□□ 0.19
SNRNP200-202ENST00000429650 CCDC173Q0VFZ6 552 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms