RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 TUBGCP6Q96RT7 1819 aa14.39□□□□□ -0.11
ATG4B-210ENST00000428861 PTGER2P43116 358 aa14.39□□□□□ -0.11
ATG4B-210ENST00000428861 ATF5Q9Y2D1 282 aaPredicted RBP14.39□□□□□ -0.11
ATG4B-210ENST00000428861 SCN11AQ9UI33 1791 aa14.39□□□□□ -0.11
ATG4B-210ENST00000428861 IL17REQ8NFR9 667 aa14.38□□□□□ -0.11
ATG4B-210ENST00000428861 SLC52A2Q9HAB3 445 aa14.38□□□□□ -0.11
ATG4B-210ENST00000428861 SPON1Q9HCB6 807 aa14.38□□□□□ -0.11
ATG4B-210ENST00000428861 TFCP2L1Q9NZI6 479 aa14.38□□□□□ -0.11
ATG4B-210ENST00000428861 C5P01031 1676 aa14.38□□□□□ -0.11
ATG4B-210ENST00000428861 ADAMTS7Q9UKP4 1686 aa14.38□□□□□ -0.11
ATG4B-210ENST00000428861 TAF1LQ8IZX4 1826 aa14.38□□□□□ -0.11
ATG4B-210ENST00000428861 MRC1P22897 1456 aa14.38□□□□□ -0.11
ATG4B-210ENST00000428861 FCHSD2O94868 740 aa14.37□□□□□ -0.11
ATG4B-210ENST00000428861 ATP6V1AP38606 617 aa14.37□□□□□ -0.11
ATG4B-210ENST00000428861 COL23A1Q86Y22 540 aaPredicted RBP14.37□□□□□ -0.11
ATG4B-210ENST00000428861 GAS2L2Q8NHY3 880 aa14.37□□□□□ -0.11
ATG4B-210ENST00000428861 SGIP1Q9BQI5 828 aa14.37□□□□□ -0.11
ATG4B-210ENST00000428861 MAP3K5Q99683 1374 aa14.36□□□□□ -0.11
ATG4B-210ENST00000428861 C4BP0C0L5 1744 aa14.36□□□□□ -0.11
ATG4B-210ENST00000428861 ZNF316A6NFI3 1004 aaPredicted RBP14.36□□□□□ -0.11
ATG4B-210ENST00000428861 SLC39A6Q13433 755 aa14.36□□□□□ -0.11
ATG4B-210ENST00000428861 PLEKHF1Q96S99 279 aa14.36□□□□□ -0.11
ATG4B-210ENST00000428861 RBM42Q9BTD8 480 aaKnown RBP14.36□□□□□ -0.11
ATG4B-210ENST00000428861 MTFR1LQ9H019 292 aa14.36□□□□□ -0.11
ATG4B-210ENST00000428861 PRKRIP1Q9H875 184 aaPredicted RBP14.36□□□□□ -0.11
ATG4B-210ENST00000428861 MYBBP1AQ9BQG0 1328 aaKnown RBP14.36□□□□□ -0.11
ATG4B-210ENST00000428861 GNAT3A8MTJ3 354 aa14.35□□□□□ -0.11
ATG4B-210ENST00000428861 PTCD1O75127 700 aaKnown RBP14.35□□□□□ -0.11
ATG4B-210ENST00000428861 QSER1Q2KHR3 1735 aa14.35□□□□□ -0.11
ATG4B-210ENST00000428861 VIRMAQ69YN4 1812 aaKnown RBP14.34□□□□□ -0.11
ATG4B-210ENST00000428861 CEMIPQ8WUJ3 1361 aa14.33□□□□□ -0.12
ATG4B-210ENST00000428861 DCTN1Q14203 1278 aa14.32□□□□□ -0.12
ATG4B-210ENST00000428861 MCM10Q7L590 875 aa14.32□□□□□ -0.12
ATG4B-210ENST00000428861 AK7Q96M32 723 aa14.32□□□□□ -0.12
ATG4B-210ENST00000428861 KCPQ6ZWJ8 1503 aa14.31□□□□□ -0.12
ATG4B-210ENST00000428861 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.31□□□□□ -0.12
ATG4B-210ENST00000428861 PHF14O94880 888 aa14.31□□□□□ -0.12
ATG4B-210ENST00000428861 UBR3Q6ZT12 1888 aa14.31□□□□□ -0.12
ATG4B-210ENST00000428861 GNPATO15228 680 aa14.3□□□□□ -0.12
ATG4B-210ENST00000428861 MSH5O43196 834 aa14.3□□□□□ -0.12
ATG4B-210ENST00000428861 KCNQ3O43525 872 aa14.3□□□□□ -0.12
ATG4B-210ENST00000428861 MSL1Q68DK7 614 aa14.3□□□□□ -0.12
ATG4B-210ENST00000428861 DNAJC10Q8IXB1 793 aa14.3□□□□□ -0.12
ATG4B-210ENST00000428861 SLC16A10Q8TF71 515 aa14.3□□□□□ -0.12
ATG4B-210ENST00000428861 ZNF831Q5JPB2 1677 aa14.3□□□□□ -0.12
ATG4B-210ENST00000428861 COL5A3P25940 1745 aaPredicted RBP14.29□□□□□ -0.12
ATG4B-210ENST00000428861 TJP1Q07157 1748 aa14.29□□□□□ -0.12
ATG4B-210ENST00000428861 CCDC184Q52MB2 194 aa14.29□□□□□ -0.12
ATG4B-210ENST00000428861 PPP1R1BQ9UD71 204 aaPredicted RBP14.29□□□□□ -0.12
ATG4B-210ENST00000428861 SIPA1L3O60292 1781 aaPredicted RBP14.29□□□□□ -0.12
ATG4B-210ENST00000428861 MYH14Q7Z406 1995 aaKnown RBP14.29□□□□□ -0.12
ATG4B-210ENST00000428861 SSFA2P28290 1259 aa14.28□□□□□ -0.12
ATG4B-210ENST00000428861 TEFQ10587 303 aa14.28□□□□□ -0.12
ATG4B-210ENST00000428861 COL24A1Q17RW2 1714 aa14.28□□□□□ -0.12
ATG4B-210ENST00000428861 RC3H1Q5TC82 1133 aaKnown RBP14.28□□□□□ -0.12
ATG4B-210ENST00000428861 CNTNAP4Q9C0A0 1308 aa14.28□□□□□ -0.12
ATG4B-210ENST00000428861 CRKLP46109 303 aaKnown RBP14.27□□□□□ -0.13
ATG4B-210ENST00000428861 NFE2L2Q16236 605 aa14.27□□□□□ -0.13
ATG4B-210ENST00000428861 INTS5Q6P9B9 1019 aaKnown RBP14.27□□□□□ -0.13
ATG4B-210ENST00000428861 ZNF790Q6PG37 636 aa14.27□□□□□ -0.13
ATG4B-210ENST00000428861 FLAD1Q8NFF5 587 aa14.27□□□□□ -0.13
ATG4B-210ENST00000428861 ZNF496Q96IT1 587 aaPredicted RBP14.27□□□□□ -0.13
ATG4B-210ENST00000428861 ARXQ96QS3 562 aa14.27□□□□□ -0.13
ATG4B-210ENST00000428861 THUMPD2Q9BTF0 503 aaKnown RBP14.27□□□□□ -0.13
ATG4B-210ENST00000428861 CICQ96RK0 1608 aaPredicted RBP14.26□□□□□ -0.13
ATG4B-210ENST00000428861 HMGB2P26583 209 aaKnown RBP14.26□□□□□ -0.13
ATG4B-210ENST00000428861 CCDC146Q8IYE0 955 aa14.26□□□□□ -0.13
ATG4B-210ENST00000428861 FHDC1Q9C0D6 1143 aaPredicted RBP14.26□□□□□ -0.13
ATG4B-210ENST00000428861 ADAMTS8Q9UP79 889 aa14.26□□□□□ -0.13
ATG4B-210ENST00000428861 UBR2Q8IWV8 1755 aa14.26□□□□□ -0.13
ATG4B-210ENST00000428861 BTBD11A6QL63 1104 aa14.25□□□□□ -0.13
ATG4B-210ENST00000428861 HTATSF1O43719 755 aaKnown RBP14.25□□□□□ -0.13
ATG4B-210ENST00000428861 RPS6KA4O75676 772 aa14.25□□□□□ -0.13
ATG4B-210ENST00000428861 CYP19A1P11511 503 aaPredicted RBP14.25□□□□□ -0.13
ATG4B-210ENST00000428861 RTF1Q92541 710 aaKnown RBP14.25□□□□□ -0.13
ATG4B-210ENST00000428861 ARHGEF1Q92888 912 aaKnown RBP14.25□□□□□ -0.13
ATG4B-210ENST00000428861 MIS18AQ9NYP9 233 aa14.25□□□□□ -0.13
ATG4B-210ENST00000428861 RTCBQ9Y3I0 505 aaKnown RBP14.25□□□□□ -0.13
ATG4B-210ENST00000428861 DLG5Q8TDM6 1919 aa14.24□□□□□ -0.13
ATG4B-210ENST00000428861 PRAMEF22A3QJZ6 481 aa14.24□□□□□ -0.13
ATG4B-210ENST00000428861 TRAPPC3LQ5T215 181 aa14.24□□□□□ -0.13
ATG4B-210ENST00000428861 TTC5Q8N0Z6 440 aa14.24□□□□□ -0.13
ATG4B-210ENST00000428861 SYT17Q9BSW7 474 aa14.24□□□□□ -0.13
ATG4B-210ENST00000428861 HEG1Q9ULI3 1381 aa14.23□□□□□ -0.13
ATG4B-210ENST00000428861 MAPK8IP3Q9UPT6 1336 aa14.23□□□□□ -0.13
ATG4B-210ENST00000428861 POLD1P28340 1107 aa14.23□□□□□ -0.13
ATG4B-210ENST00000428861 VSIG10Q8N0Z9 540 aa14.23□□□□□ -0.13
ATG4B-210ENST00000428861 ZBTB1Q9Y2K1 713 aa14.23□□□□□ -0.13
ATG4B-210ENST00000428861 RRP7AQ9Y3A4 280 aaKnown RBP14.23□□□□□ -0.13
ATG4B-210ENST00000428861 NEFMP07197 916 aa14.22□□□□□ -0.13
ATG4B-210ENST00000428861 TMPOP42166 694 aaKnown RBP14.22□□□□□ -0.13
ATG4B-210ENST00000428861 PNNQ9H307 717 aaKnown RBP14.22□□□□□ -0.13
ATG4B-210ENST00000428861 CCDC87Q9NVE4 849 aa14.22□□□□□ -0.13
ATG4B-210ENST00000428861 SRP68Q9UHB9 627 aaKnown RBP14.22□□□□□ -0.13
ATG4B-210ENST00000428861 SOS1Q07889 1333 aaPredicted RBP14.21□□□□□ -0.13
ATG4B-210ENST00000428861 ADRA2BP18089 450 aa14.21□□□□□ -0.13
ATG4B-210ENST00000428861 RIPK4P57078 832 aa14.21□□□□□ -0.13
ATG4B-210ENST00000428861 WDR43Q15061 677 aaKnown RBP eCLIP14.21□□□□□ -0.13
ATG4B-210ENST00000428861 TAF7Q15545 349 aaPredicted RBP14.21□□□□□ -0.13
ATG4B-210ENST00000428861 FMNL2Q96PY5 1086 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms