RNA–Protein interactions for RNA: ENST00000427469.5

RCC1-207, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-207ENST00000427469 SIK1P57059 783 aa17.8■□□□□ 0.44
RCC1-207ENST00000427469 ZNF530Q6P9A1 599 aaPredicted RBP17.8■□□□□ 0.44
RCC1-207ENST00000427469 COL23A1Q86Y22 540 aaPredicted RBP17.8■□□□□ 0.44
RCC1-207ENST00000427469 DCAF5Q96JK2 942 aa17.8■□□□□ 0.44
RCC1-207ENST00000427469 ERVV-2B6SEH9 535 aa17.79■□□□□ 0.44
RCC1-207ENST00000427469 PLEKHO1Q53GL0 409 aaPredicted RBP17.79■□□□□ 0.44
RCC1-207ENST00000427469 ATG3Q9NT62 314 aa17.79■□□□□ 0.44
RCC1-207ENST00000427469 KIAA1551Q9HCM1 1747 aa17.78■□□□□ 0.44
RCC1-207ENST00000427469 HSP90AB1P08238 724 aaKnown RBP17.78■□□□□ 0.44
RCC1-207ENST00000427469 ITPK1Q13572 414 aa17.78■□□□□ 0.44
RCC1-207ENST00000427469 LINC00116Q8NCU8 138 aa17.78■□□□□ 0.44
RCC1-207ENST00000427469 ARXQ96QS3 562 aa17.78■□□□□ 0.44
RCC1-207ENST00000427469 SYT17Q9BSW7 474 aa17.78■□□□□ 0.44
RCC1-207ENST00000427469 SLC4A9Q96Q91 983 aa17.77■□□□□ 0.44
RCC1-207ENST00000427469 KCPQ6ZWJ8 1503 aa17.76■□□□□ 0.43
RCC1-207ENST00000427469 DLG5Q8TDM6 1919 aa17.76■□□□□ 0.43
RCC1-207ENST00000427469 BRCA1P38398 1863 aaKnown RBP17.74■□□□□ 0.43
RCC1-207ENST00000427469 DIAPH1O60610 1272 aaKnown RBP17.74■□□□□ 0.43
RCC1-207ENST00000427469 HMGB2P26583 209 aaKnown RBP17.74■□□□□ 0.43
RCC1-207ENST00000427469 HMOX1P09601 288 aa17.72■□□□□ 0.43
RCC1-207ENST00000427469 SSFA2P28290 1259 aa17.72■□□□□ 0.43
RCC1-207ENST00000427469 AKAP4Q5JQC9 854 aa17.72■□□□□ 0.43
RCC1-207ENST00000427469 C1orf141Q5JVX7 400 aa17.72■□□□□ 0.43
RCC1-207ENST00000427469 FLAD1Q8NFF5 587 aa17.72■□□□□ 0.43
RCC1-207ENST00000427469 AK7Q96M32 723 aa17.72■□□□□ 0.43
RCC1-207ENST00000427469 SMIM5Q71RC9 77 aa17.71■□□□□ 0.43
RCC1-207ENST00000427469 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.7■□□□□ 0.42
RCC1-207ENST00000427469 POLD1P28340 1107 aa17.7■□□□□ 0.42
RCC1-207ENST00000427469 ATP6V1AP38606 617 aa17.7■□□□□ 0.42
RCC1-207ENST00000427469 MSL1Q68DK7 614 aa17.7■□□□□ 0.42
RCC1-207ENST00000427469 CNTNAP4Q9C0A0 1308 aa17.7■□□□□ 0.42
RCC1-207ENST00000427469 CABP4P57796 275 aa17.69■□□□□ 0.42
RCC1-207ENST00000427469 MTHFSDQ2M296 383 aaKnown RBP17.69■□□□□ 0.42
RCC1-207ENST00000427469 NFATC2IPQ8NCF5 419 aa17.68■□□□□ 0.42
RCC1-207ENST00000427469 SLC52A2Q9HAB3 445 aa17.68■□□□□ 0.42
RCC1-207ENST00000427469 N4BP2Q86UW6 1770 aaPredicted RBP17.68■□□□□ 0.42
RCC1-207ENST00000427469 GNPATO15228 680 aa17.67■□□□□ 0.42
RCC1-207ENST00000427469 RNMTO43148 476 aaKnown RBP17.67■□□□□ 0.42
RCC1-207ENST00000427469 PHF14O94880 888 aa17.67■□□□□ 0.42
RCC1-207ENST00000427469 NLGN2Q8NFZ4 835 aa17.67■□□□□ 0.42
RCC1-207ENST00000427469 LGR6Q9HBX8 967 aa17.67■□□□□ 0.42
RCC1-207ENST00000427469 AFDNP55196 1824 aaKnown RBP17.66■□□□□ 0.42
RCC1-207ENST00000427469 MSH5O43196 834 aa17.66■□□□□ 0.42
RCC1-207ENST00000427469 PPP2R1AP30153 589 aa17.66■□□□□ 0.42
RCC1-207ENST00000427469 RC3H1Q5TC82 1133 aaKnown RBP17.66■□□□□ 0.42
RCC1-207ENST00000427469 RSPH6AQ9H0K4 717 aa17.65■□□□□ 0.42
RCC1-207ENST00000427469 CEMIPQ8WUJ3 1361 aa17.65■□□□□ 0.42
RCC1-207ENST00000427469 SCN7AQ01118 1682 aa17.64■□□□□ 0.42
RCC1-207ENST00000427469 NRXN2Q9P2S2 1712 aa17.64■□□□□ 0.41
RCC1-207ENST00000427469 CNGB1Q14028 1251 aaPredicted RBP17.64■□□□□ 0.41
RCC1-207ENST00000427469 RBM42Q9BTD8 480 aaKnown RBP17.64■□□□□ 0.41
RCC1-207ENST00000427469 BCORQ6W2J9 1755 aa17.62■□□□□ 0.41
RCC1-207ENST00000427469 KDM3BQ7LBC6 1761 aa17.62■□□□□ 0.41
RCC1-207ENST00000427469 PTCD1O75127 700 aaKnown RBP17.62■□□□□ 0.41
RCC1-207ENST00000427469 ADRA2BP18089 450 aa17.62■□□□□ 0.41
RCC1-207ENST00000427469 YY1P25490 414 aa17.62■□□□□ 0.41
RCC1-207ENST00000427469 ARFGEF1Q9Y6D6 1849 aa17.62■□□□□ 0.41
RCC1-207ENST00000427469 LAMB4A4D0S4 1761 aa17.61■□□□□ 0.41
RCC1-207ENST00000427469 U2SURPO15042 1029 aaKnown RBP17.61■□□□□ 0.41
RCC1-207ENST00000427469 RPS6KA4O75676 772 aa17.61■□□□□ 0.41
RCC1-207ENST00000427469 CRKLP46109 303 aaKnown RBP17.61■□□□□ 0.41
RCC1-207ENST00000427469 C10orf71Q711Q0 1435 aa17.61■□□□□ 0.41
RCC1-207ENST00000427469 DLEC1Q9Y238 1755 aa17.61■□□□□ 0.41
RCC1-207ENST00000427469 DCAF8L1A6NGE4 600 aa17.6■□□□□ 0.41
RCC1-207ENST00000427469 RTCBQ9Y3I0 505 aaKnown RBP17.6■□□□□ 0.41
RCC1-207ENST00000427469 CD2APQ9Y5K6 639 aa17.6■□□□□ 0.41
RCC1-207ENST00000427469 PRKAR2BP31323 418 aa17.59■□□□□ 0.41
RCC1-207ENST00000427469 SLC39A6Q13433 755 aa17.59■□□□□ 0.41
RCC1-207ENST00000427469 KLHL34Q8N239 644 aa17.59■□□□□ 0.41
RCC1-207ENST00000427469 GAS2L2Q8NHY3 880 aa17.59■□□□□ 0.41
RCC1-207ENST00000427469 ARHGEF1Q92888 912 aaKnown RBP17.59■□□□□ 0.41
RCC1-207ENST00000427469 PHACTR3Q96KR7 559 aa17.59■□□□□ 0.41
RCC1-207ENST00000427469 CFAP53Q96M91 514 aa17.59■□□□□ 0.41
RCC1-207ENST00000427469 PXDNLA1KZ92 1463 aa17.58■□□□□ 0.41
RCC1-207ENST00000427469 YBX3P16989 372 aaKnown RBP eCLIP17.58■□□□□ 0.48e-7■□□□□ 9
RCC1-207ENST00000427469 INTS5Q6P9B9 1019 aaKnown RBP17.58■□□□□ 0.4
RCC1-207ENST00000427469 IL17REQ8NFR9 667 aa17.58■□□□□ 0.4
RCC1-207ENST00000427469 GNAT3A8MTJ3 354 aa17.57■□□□□ 0.4
RCC1-207ENST00000427469 GYS1P13807 737 aa17.57■□□□□ 0.4
RCC1-207ENST00000427469 DNAJC10Q8IXB1 793 aa17.57■□□□□ 0.4
RCC1-207ENST00000427469 SOS1Q07889 1333 aaPredicted RBP17.56■□□□□ 0.4
RCC1-207ENST00000427469 USP42Q9H9J4 1324 aaKnown RBP17.56■□□□□ 0.4
RCC1-207ENST00000427469 CYP19A1P11511 503 aaPredicted RBP17.56■□□□□ 0.4
RCC1-207ENST00000427469 TRAPPC3LQ5T215 181 aa17.56■□□□□ 0.4
RCC1-207ENST00000427469 ANKRD31Q8N7Z5 1873 aa17.55■□□□□ 0.4
RCC1-207ENST00000427469 MMP10P09238 476 aa17.55■□□□□ 0.4
RCC1-207ENST00000427469 VSIG10Q8N0Z9 540 aa17.55■□□□□ 0.4
RCC1-207ENST00000427469 FCHSD2O94868 740 aa17.54■□□□□ 0.4
RCC1-207ENST00000427469 CCDC87Q9NVE4 849 aa17.54■□□□□ 0.4
RCC1-207ENST00000427469 NUDCQ9Y266 331 aa17.54■□□□□ 0.4
RCC1-207ENST00000427469 COL15A1P39059 1388 aa17.53■□□□□ 0.4
RCC1-207ENST00000427469 HEG1Q9ULI3 1381 aa17.53■□□□□ 0.4
RCC1-207ENST00000427469 GPR162Q16538 588 aa17.53■□□□□ 0.4
RCC1-207ENST00000427469 U2AF1L5P0DN76 240 aaPredicted RBP17.52■□□□□ 0.4
RCC1-207ENST00000427469 U2AF1Q01081 240 aaKnown RBP eCLIP17.52■□□□□ 0.4
RCC1-207ENST00000427469 NLGN1Q8N2Q7 840 aa17.52■□□□□ 0.4
RCC1-207ENST00000427469 SRP68Q9UHB9 627 aaKnown RBP17.52■□□□□ 0.4
RCC1-207ENST00000427469 ZBTB1Q9Y2K1 713 aa17.52■□□□□ 0.4
RCC1-207ENST00000427469 RFC4P35249 363 aa17.51■□□□□ 0.39
RCC1-207ENST00000427469 ZNF790Q6PG37 636 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms