RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 STK31Q9BXU1 1019 aa17.6■□□□□ 0.41
ERCC3-202ENST00000426778 NUTM1Q86Y26 1132 aa17.6■□□□□ 0.41
ERCC3-202ENST00000426778 TMX3Q96JJ7 454 aa17.6■□□□□ 0.41
ERCC3-202ENST00000426778 SYCE3A1L190 88 aa17.59■□□□□ 0.41
ERCC3-202ENST00000426778 KIF24Q5T7B8 1368 aa17.59■□□□□ 0.41
ERCC3-202ENST00000426778 RBM33Q96EV2 1170 aaKnown RBP17.59■□□□□ 0.41
ERCC3-202ENST00000426778 KIAA0232Q92628 1395 aa17.59■□□□□ 0.41
ERCC3-202ENST00000426778 OVOS2A0A0J9YW53 1432 aa17.58■□□□□ 0.41
ERCC3-202ENST00000426778 OVOS2Q6IE36 1432 aa17.58■□□□□ 0.41
ERCC3-202ENST00000426778 MPNDQ8N594 471 aa17.58■□□□□ 0.4
ERCC3-202ENST00000426778 LRRCC1Q9C099 1032 aa17.58■□□□□ 0.4
ERCC3-202ENST00000426778 PHAXQ9H814 394 aaKnown RBP17.58■□□□□ 0.4
ERCC3-202ENST00000426778 USP6P35125 1406 aa17.58■□□□□ 0.4
ERCC3-202ENST00000426778 EIF2S2P20042 333 aaKnown RBP17.58■□□□□ 0.4
ERCC3-202ENST00000426778 MX1P20591 662 aa17.58■□□□□ 0.4
ERCC3-202ENST00000426778 HAP1P54257 671 aaPredicted RBP17.58■□□□□ 0.4
ERCC3-202ENST00000426778 NLRP6P59044 892 aa17.58■□□□□ 0.4
ERCC3-202ENST00000426778 TMEM63CQ9P1W3 806 aa17.58■□□□□ 0.4
ERCC3-202ENST00000426778 ISY1Q9ULR0 285 aaKnown RBP17.58■□□□□ 0.4
ERCC3-202ENST00000426778 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.57■□□□□ 0.4
ERCC3-202ENST00000426778 AKAP12Q02952 1782 aa17.57■□□□□ 0.4
ERCC3-202ENST00000426778 ANP32BQ92688 251 aaKnown RBP17.57■□□□□ 0.4
ERCC3-202ENST00000426778 ANXA1P04083 346 aa17.57■□□□□ 0.4
ERCC3-202ENST00000426778 CCT4P50991 539 aaKnown RBP17.57■□□□□ 0.4
ERCC3-202ENST00000426778 ESYT1Q9BSJ8 1104 aa17.57■□□□□ 0.4
ERCC3-202ENST00000426778 SETD1BQ9UPS6 1966 aaKnown RBP17.57■□□□□ 0.4
ERCC3-202ENST00000426778 CEP170BQ9Y4F5 1589 aaPredicted RBP17.56■□□□□ 0.4
ERCC3-202ENST00000426778 CLEC17AQ6ZS10 378 aa17.56■□□□□ 0.4
ERCC3-202ENST00000426778 AMOTL2Q9Y2J4 779 aa17.56■□□□□ 0.4
ERCC3-202ENST00000426778 TNRQ92752 1358 aa17.55■□□□□ 0.4
ERCC3-202ENST00000426778 PTMSP20962 102 aa17.55■□□□□ 0.4
ERCC3-202ENST00000426778 TMEM2Q9UHN6 1383 aa17.55■□□□□ 0.4
ERCC3-202ENST00000426778 HDGFP51858 240 aaKnown RBP17.55■□□□□ 0.4
ERCC3-202ENST00000426778 CCDC173Q0VFZ6 552 aa17.55■□□□□ 0.4
ERCC3-202ENST00000426778 PLEKHG3A1L390 1219 aa17.54■□□□□ 0.4
ERCC3-202ENST00000426778 IL17REQ8NFR9 667 aa17.54■□□□□ 0.4
ERCC3-202ENST00000426778 CHMLP26374 656 aa17.54■□□□□ 0.4
ERCC3-202ENST00000426778 ADAMTS13Q76LX8 1427 aa17.54■□□□□ 0.4
ERCC3-202ENST00000426778 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
ERCC3-202ENST00000426778 DIP2BQ9P265 1576 aa17.53■□□□□ 0.4
ERCC3-202ENST00000426778 NRKQ7Z2Y5 1582 aa17.52■□□□□ 0.4
ERCC3-202ENST00000426778 CWC22Q9HCG8 908 aaKnown RBP17.52■□□□□ 0.4
ERCC3-202ENST00000426778 PTPRUQ92729 1446 aa17.52■□□□□ 0.4
ERCC3-202ENST00000426778 USP44Q9H0E7 712 aa17.52■□□□□ 0.4
ERCC3-202ENST00000426778 ZNF445P59923 1031 aa17.51■□□□□ 0.39
ERCC3-202ENST00000426778 DDX54Q8TDD1 881 aaKnown RBP17.51■□□□□ 0.39
ERCC3-202ENST00000426778 GNAT3A8MTJ3 354 aa17.51■□□□□ 0.39
ERCC3-202ENST00000426778 SURF6O75683 361 aaKnown RBP17.51■□□□□ 0.39
ERCC3-202ENST00000426778 CPA1P15085 419 aa17.51■□□□□ 0.39
ERCC3-202ENST00000426778 MSNP26038 577 aaKnown RBP17.51■□□□□ 0.39
ERCC3-202ENST00000426778 CCDC30Q5VVM6 783 aa17.51■□□□□ 0.39
ERCC3-202ENST00000426778 PPP1R9BQ96SB3 815 aa17.51■□□□□ 0.39
ERCC3-202ENST00000426778 OSBPL3Q9H4L5 887 aa17.51■□□□□ 0.39
ERCC3-202ENST00000426778 TECPR2O15040 1411 aa17.51■□□□□ 0.39
ERCC3-202ENST00000426778 FLT4P35916 1363 aa17.51■□□□□ 0.39
ERCC3-202ENST00000426778 GADD45BO75293 160 aaPredicted RBP17.51■□□□□ 0.39
ERCC3-202ENST00000426778 ATP8B2P98198 1209 aa17.51■□□□□ 0.39
ERCC3-202ENST00000426778 KIAA1211Q6ZU35 1233 aa17.51■□□□□ 0.39
ERCC3-202ENST00000426778 SALL3Q9BXA9 1300 aa17.5■□□□□ 0.39
ERCC3-202ENST00000426778 REREQ9P2R6 1566 aa17.5■□□□□ 0.39
ERCC3-202ENST00000426778 XPCQ01831 940 aaPredicted RBP17.5■□□□□ 0.39
ERCC3-202ENST00000426778 UBTFL1P0CB47 393 aaPredicted RBP17.5■□□□□ 0.39
ERCC3-202ENST00000426778 HDGFL1Q5TGJ6 251 aa17.5■□□□□ 0.39
ERCC3-202ENST00000426778 ZSCAN30Q86W11 494 aa17.5■□□□□ 0.39
ERCC3-202ENST00000426778 AGLP35573 1532 aa17.49■□□□□ 0.39
ERCC3-202ENST00000426778 PPP1R42Q7Z4L9 355 aa17.49■□□□□ 0.39
ERCC3-202ENST00000426778 KCNQ3O43525 872 aa17.49■□□□□ 0.39
ERCC3-202ENST00000426778 GNAI3P08754 354 aa17.49■□□□□ 0.39
ERCC3-202ENST00000426778 UBE2Q2Q8WVN8 375 aa17.49■□□□□ 0.39
ERCC3-202ENST00000426778 RGPD8O14715 1765 aaPredicted RBP17.49■□□□□ 0.39
ERCC3-202ENST00000426778 ARHGEF10O15013 1369 aa17.49■□□□□ 0.39
ERCC3-202ENST00000426778 NBPF7P0C2Y1 421 aaPredicted RBP17.48■□□□□ 0.39
ERCC3-202ENST00000426778 HSP90AA2PQ14568 343 aaPredicted RBP17.48■□□□□ 0.39
ERCC3-202ENST00000426778 SIRT1Q96EB6 747 aa17.48■□□□□ 0.39
ERCC3-202ENST00000426778 IGSF1Q8N6C5 1336 aa17.48■□□□□ 0.39
ERCC3-202ENST00000426778 ABTB2Q8N961 1025 aa17.48■□□□□ 0.39
ERCC3-202ENST00000426778 USP31Q70CQ4 1352 aa17.48■□□□□ 0.39
ERCC3-202ENST00000426778 SPG7Q9UQ90 795 aa17.48■□□□□ 0.39
ERCC3-202ENST00000426778 SBNO1A3KN83 1393 aa17.47■□□□□ 0.39
ERCC3-202ENST00000426778 IBTKQ9P2D0 1353 aaPredicted RBP17.47■□□□□ 0.39
ERCC3-202ENST00000426778 HOXC9P31274 260 aa17.47■□□□□ 0.39
ERCC3-202ENST00000426778 LGR6Q9HBX8 967 aa17.47■□□□□ 0.39
ERCC3-202ENST00000426778 SRGAP3O43295 1099 aa17.47■□□□□ 0.39
ERCC3-202ENST00000426778 MCCP23508 829 aa17.47■□□□□ 0.39
ERCC3-202ENST00000426778 TCHHQ07283 1943 aa17.46■□□□□ 0.39
ERCC3-202ENST00000426778 RGPD1P0DJD0 1748 aa17.46■□□□□ 0.39
ERCC3-202ENST00000426778 RBM10P98175 930 aaKnown RBP17.46■□□□□ 0.39
ERCC3-202ENST00000426778 CWC27Q6UX04 472 aaKnown RBP17.46■□□□□ 0.39
ERCC3-202ENST00000426778 BRD1O95696 1058 aa17.45■□□□□ 0.38
ERCC3-202ENST00000426778 ARID3AQ99856 593 aa17.45■□□□□ 0.38
ERCC3-202ENST00000426778 R3HCC1Q9Y3T6 440 aaKnown RBP17.45■□□□□ 0.38
ERCC3-202ENST00000426778 SOS1Q07889 1333 aaPredicted RBP17.45■□□□□ 0.38
ERCC3-202ENST00000426778 TAF7Q15545 349 aaPredicted RBP17.44■□□□□ 0.38
ERCC3-202ENST00000426778 LRSAM1Q6UWE0 723 aa17.44■□□□□ 0.38
ERCC3-202ENST00000426778 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.44■□□□□ 0.38
ERCC3-202ENST00000426778 CHPF2Q9P2E5 772 aa17.44■□□□□ 0.38
ERCC3-202ENST00000426778 RASEFQ8IZ41 740 aa17.44■□□□□ 0.38
ERCC3-202ENST00000426778 KDRP35968 1356 aa17.44■□□□□ 0.38
ERCC3-202ENST00000426778 PI4KAP2A4QPH2 592 aa17.44■□□□□ 0.38
ERCC3-202ENST00000426778 PI4KAP1Q8N8J0 262 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms