RNA–Protein interactions for RNA: ENST00000425424.3

SAPCD1-209, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SAPCD1, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-209ENST00000425424 BTAF1O14981 1849 aa21.5■■□□□ 1.03
SAPCD1-209ENST00000425424 TNS1Q9HBL0 1735 aaKnown RBP21.5■■□□□ 1.03
SAPCD1-209ENST00000425424 ZNF853P0CG23 659 aa21.5■■□□□ 1.03
SAPCD1-209ENST00000425424 PRIM1P49642 420 aaKnown RBP21.5■■□□□ 1.03
SAPCD1-209ENST00000425424 CFAP44Q96MT7 982 aa21.5■■□□□ 1.03
SAPCD1-209ENST00000425424 UBR2Q8IWV8 1755 aa21.5■■□□□ 1.03
SAPCD1-209ENST00000425424 RGPD3A6NKT7 1758 aaPredicted RBP21.49■■□□□ 1.03
SAPCD1-209ENST00000425424 RGPD4Q7Z3J3 1758 aa21.49■■□□□ 1.03
SAPCD1-209ENST00000425424 GNAI1P63096 354 aa21.49■■□□□ 1.03
SAPCD1-209ENST00000425424 NFATC2IPQ8NCF5 419 aa21.49■■□□□ 1.03
SAPCD1-209ENST00000425424 SALL2Q9Y467 1007 aaPredicted RBP21.49■■□□□ 1.03
SAPCD1-209ENST00000425424 CICQ96RK0 1608 aaPredicted RBP21.48■■□□□ 1.03
SAPCD1-209ENST00000425424 GOLGA2Q08379 1002 aa21.48■■□□□ 1.03
SAPCD1-209ENST00000425424 PIGBQ92521 554 aa21.48■■□□□ 1.03
SAPCD1-209ENST00000425424 ACSBG1Q96GR2 724 aa21.48■■□□□ 1.03
SAPCD1-209ENST00000425424 ZNF831Q5JPB2 1677 aa21.47■■□□□ 1.03
SAPCD1-209ENST00000425424 CHL1O00533 1208 aa21.47■■□□□ 1.03
SAPCD1-209ENST00000425424 SENP3-EIF4A1A0A087X0R7 540 aa21.46■■□□□ 1.03
SAPCD1-209ENST00000425424 BTBD11A6QL63 1104 aa21.46■■□□□ 1.03
SAPCD1-209ENST00000425424 E9PSI1 815 aa21.46■■□□□ 1.03
SAPCD1-209ENST00000425424 KCNQ2O43526 872 aa21.46■■□□□ 1.03
SAPCD1-209ENST00000425424 SYTL4Q96C24 671 aaPredicted RBP21.46■■□□□ 1.03
SAPCD1-209ENST00000425424 KCPQ6ZWJ8 1503 aa21.45■■□□□ 1.02
SAPCD1-209ENST00000425424 ZNF790Q6PG37 636 aa21.44■■□□□ 1.02
SAPCD1-209ENST00000425424 SMARCC1Q92922 1105 aaPredicted RBP21.44■■□□□ 1.02
SAPCD1-209ENST00000425424 MYH16Q9H6N6 1097 aa21.44■■□□□ 1.02
SAPCD1-209ENST00000425424 EP400Q96L91 3159 aa21.44■■□□□ 1.02
SAPCD1-209ENST00000425424 LY75O60449 1722 aa21.43■■□□□ 1.02
SAPCD1-209ENST00000425424 TSPYL4Q9UJ04 414 aa21.43■■□□□ 1.02
SAPCD1-209ENST00000425424 TRIM37O94972 964 aa21.42■■□□□ 1.02
SAPCD1-209ENST00000425424 SLFN5Q08AF3 891 aa21.42■■□□□ 1.02
SAPCD1-209ENST00000425424 CCDC125Q86Z20 511 aa21.42■■□□□ 1.02
SAPCD1-209ENST00000425424 TRMT2AQ8IZ69 625 aaKnown RBP21.42■■□□□ 1.02
SAPCD1-209ENST00000425424 ATG3Q9NT62 314 aa21.42■■□□□ 1.02
SAPCD1-209ENST00000425424 PALLDQ8WX93 1383 aa21.41■■□□□ 1.02
SAPCD1-209ENST00000425424 HEG1Q9ULI3 1381 aa21.41■■□□□ 1.02
SAPCD1-209ENST00000425424 TTC5Q8N0Z6 440 aa21.41■■□□□ 1.02
SAPCD1-209ENST00000425424 MBIPQ9NS73 344 aa21.41■■□□□ 1.02
SAPCD1-209ENST00000425424 FANCIQ9NVI1 1328 aa21.4■■□□□ 1.02
SAPCD1-209ENST00000425424 SPINK5Q9NQ38 1064 aaPredicted RBP21.4■■□□□ 1.02
SAPCD1-209ENST00000425424 SOS1Q07889 1333 aaPredicted RBP21.39■■□□□ 1.01
SAPCD1-209ENST00000425424 PLSCR1O15162 318 aa21.39■■□□□ 1.01
SAPCD1-209ENST00000425424 PTF1AQ7RTS3 328 aa21.39■■□□□ 1.01
SAPCD1-209ENST00000425424 VSIG10Q8N0Z9 540 aa21.39■■□□□ 1.01
SAPCD1-209ENST00000425424 ASAP1Q9ULH1 1129 aa21.39■■□□□ 1.01
SAPCD1-209ENST00000425424 YTHDC1Q96MU7 727 aaKnown RBP21.38■■□□□ 1.01
SAPCD1-209ENST00000425424 FMNL2Q96PY5 1086 aa21.38■■□□□ 1.01
SAPCD1-209ENST00000425424 LAS1LQ9Y4W2 734 aaKnown RBP21.38■■□□□ 1.01
SAPCD1-209ENST00000425424 EIF4A1P60842 406 aaKnown RBP21.37■■□□□ 1.01
SAPCD1-209ENST00000425424 SLC39A6Q13433 755 aa21.37■■□□□ 1.01
SAPCD1-209ENST00000425424 MIS18AQ9NYP9 233 aa21.37■■□□□ 1.01
SAPCD1-209ENST00000425424 LAMB4A4D0S4 1761 aa21.37■■□□□ 1.01
SAPCD1-209ENST00000425424 TJP1Q07157 1748 aa21.36■■□□□ 1.01
SAPCD1-209ENST00000425424 HOXB7P09629 217 aa21.36■■□□□ 1.01
SAPCD1-209ENST00000425424 DUSP27Q5VZP5 1158 aa21.36■■□□□ 1.01
SAPCD1-209ENST00000425424 CDCA7LQ96GN5 454 aa21.36■■□□□ 1.01
SAPCD1-209ENST00000425424 HMGB2P26583 209 aaKnown RBP21.35■■□□□ 1.01
SAPCD1-209ENST00000425424 TSR2Q969E8 191 aaKnown RBP21.35■■□□□ 1.01
SAPCD1-209ENST00000425424 ZNF496Q96IT1 587 aaPredicted RBP21.35■■□□□ 1.01
SAPCD1-209ENST00000425424 KAT6BQ8WYB5 2073 aa21.35■■□□□ 1.01
SAPCD1-209ENST00000425424 C5P01031 1676 aa21.34■■□□□ 1.01
SAPCD1-209ENST00000425424 KCNQ3O43525 872 aa21.34■■□□□ 1.01
SAPCD1-209ENST00000425424 COL5A3P25940 1745 aaPredicted RBP21.33■■□□□ 1.01
SAPCD1-209ENST00000425424 LOC102724428A0A0B4J2F2 783 aa21.33■■□□□ 1.01
SAPCD1-209ENST00000425424 SIK1P57059 783 aa21.33■■□□□ 1.01
SAPCD1-209ENST00000425424 SF3B2Q13435 895 aaKnown RBP21.33■■□□□ 1.01
SAPCD1-209ENST00000425424 SLC27A3Q5K4L6 730 aa21.33■■□□□ 1.01
SAPCD1-209ENST00000425424 ILDR2Q71H61 639 aa21.33■■□□□ 1.01
SAPCD1-209ENST00000425424 RREB1Q92766 1687 aa21.33■■□□□ 1
SAPCD1-209ENST00000425424 APBA3O96018 575 aa21.32■■□□□ 1
SAPCD1-209ENST00000425424 CT47B1P0C2W7 299 aaPredicted RBP21.32■■□□□ 1
SAPCD1-209ENST00000425424 GIGYF1O75420 1035 aaPredicted RBP21.31■■□□□ 1
SAPCD1-209ENST00000425424 SNRPA1P09661 255 aaKnown RBP21.31■■□□□ 1
SAPCD1-209ENST00000425424 TEX13AQ9BXU3 409 aaPredicted RBP21.31■■□□□ 1
SAPCD1-209ENST00000425424 CHMP4AQ9BY43 222 aa21.31■■□□□ 1
SAPCD1-209ENST00000425424 PTCD1O75127 700 aaKnown RBP21.3■■□□□ 1
SAPCD1-209ENST00000425424 BAG6P46379 1132 aa21.3■■□□□ 1
SAPCD1-209ENST00000425424 UPF1Q92900 1129 aaKnown RBP eCLIP21.29■■□□□ 1
SAPCD1-209ENST00000425424 SLC4A9Q96Q91 983 aa21.29■■□□□ 1
SAPCD1-209ENST00000425424 RBM42Q9BTD8 480 aaKnown RBP21.29■■□□□ 1
SAPCD1-209ENST00000425424 TAF1LQ8IZX4 1826 aa21.29■■□□□ 1
SAPCD1-209ENST00000425424 EXOSC9Q06265 439 aaKnown RBP21.28■■□□□ 1
SAPCD1-209ENST00000425424 ZNF428Q96B54 188 aa21.28■■□□□ 1
SAPCD1-209ENST00000425424 TWISTNBQ3B726 338 aaPredicted RBP21.27■■□□□ 1
SAPCD1-209ENST00000425424 C8orf58Q8NAV2 365 aa21.27■■□□□ 1
SAPCD1-209ENST00000425424 CAMKK2Q96RR4 588 aa21.27■■□□□ 1
SAPCD1-209ENST00000425424 CCNL1Q9UK58 526 aaPredicted RBP21.27■■□□□ 1
SAPCD1-209ENST00000425424 ERBB4Q15303 1308 aa21.27■□□□□ 0.99
SAPCD1-209ENST00000425424 ATP6V1AP38606 617 aa21.26■□□□□ 0.99
SAPCD1-209ENST00000425424 TXNRD1Q16881 649 aa21.26■□□□□ 0.99
SAPCD1-209ENST00000425424 KRT24Q2M2I5 525 aa21.25■□□□□ 0.99
SAPCD1-209ENST00000425424 C4BP0C0L5 1744 aa21.24■□□□□ 0.99
SAPCD1-209ENST00000425424 NUP188Q5SRE5 1749 aa21.24■□□□□ 0.99
SAPCD1-209ENST00000425424 STARD3NLO95772 234 aa21.24■□□□□ 0.99
SAPCD1-209ENST00000425424 ITPK1Q13572 414 aa21.24■□□□□ 0.99
SAPCD1-209ENST00000425424 PROM2Q8N271 834 aa21.24■□□□□ 0.99
SAPCD1-209ENST00000425424 TSPYL6Q8N831 410 aa21.24■□□□□ 0.99
SAPCD1-209ENST00000425424 CNTNAP4Q9C0A0 1308 aa21.24■□□□□ 0.99
SAPCD1-209ENST00000425424 VAMP4O75379 141 aa21.23■□□□□ 0.99
SAPCD1-209ENST00000425424 CYP19A1P11511 503 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms