RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 HDGFL1Q5TGJ6 251 aa9.14□□□□□ -0.95
LSM8-204ENST00000424702 DZIP1LQ8IYY4 767 aaKnown RBP9.14□□□□□ -0.95
LSM8-204ENST00000424702 DCTN1Q14203 1278 aa9.14□□□□□ -0.95
LSM8-204ENST00000424702 ZNF521Q96K83 1311 aa9.14□□□□□ -0.95
LSM8-204ENST00000424702 FNBP4Q8N3X1 1017 aaPredicted RBP9.13□□□□□ -0.95
LSM8-204ENST00000424702 CFAP44Q96MT7 982 aa9.13□□□□□ -0.95
LSM8-204ENST00000424702 PLEKHF1Q96S99 279 aa9.13□□□□□ -0.95
LSM8-204ENST00000424702 BCL11AQ9H165 835 aa9.13□□□□□ -0.95
LSM8-204ENST00000424702 SPINK5Q9NQ38 1064 aaPredicted RBP9.13□□□□□ -0.95
LSM8-204ENST00000424702 ZNF652Q9Y2D9 606 aa9.13□□□□□ -0.95
LSM8-204ENST00000424702 RARSP54136 660 aaKnown RBP9.13□□□□□ -0.95
LSM8-204ENST00000424702 MCM10Q7L590 875 aa9.13□□□□□ -0.95
LSM8-204ENST00000424702 PHKG2P15735 406 aa9.13□□□□□ -0.95
LSM8-204ENST00000424702 AK7Q96M32 723 aa9.13□□□□□ -0.95
LSM8-204ENST00000424702 SNRPA1P09661 255 aaKnown RBP9.12□□□□□ -0.95
LSM8-204ENST00000424702 PANK1Q8TE04 598 aa9.12□□□□□ -0.95
LSM8-204ENST00000424702 COL14A1Q05707 1796 aaKnown RBP9.12□□□□□ -0.95
LSM8-204ENST00000424702 TCERG1O14776 1098 aaKnown RBP9.12□□□□□ -0.95
LSM8-204ENST00000424702 TRIM35Q9UPQ4 493 aa9.12□□□□□ -0.95
LSM8-204ENST00000424702 ANKRD26Q9UPS8 1709 aa9.12□□□□□ -0.95
LSM8-204ENST00000424702 NHSL1Q5SYE7 1610 aa9.12□□□□□ -0.95
LSM8-204ENST00000424702 RWDD1Q9H446 243 aaPredicted RBP9.12□□□□□ -0.95
LSM8-204ENST00000424702 AAMPQ13685 434 aa9.11□□□□□ -0.95
LSM8-204ENST00000424702 HSP90AB3PQ58FF7 597 aa9.11□□□□□ -0.95
LSM8-204ENST00000424702 DAXXQ9UER7 740 aaPredicted RBP9.11□□□□□ -0.95
LSM8-204ENST00000424702 DDX19BQ9UMR2 479 aa9.11□□□□□ -0.95
LSM8-204ENST00000424702 STRCP1A6NGW2 1772 aa9.11□□□□□ -0.95
LSM8-204ENST00000424702 PRKCSHP14314 528 aaPredicted RBP9.11□□□□□ -0.95
LSM8-204ENST00000424702 BCL11BQ9C0K0 894 aaPredicted RBP9.11□□□□□ -0.95
LSM8-204ENST00000424702 COL5A2P05997 1499 aaPredicted RBP9.11□□□□□ -0.95
LSM8-204ENST00000424702 HOXB7P09629 217 aa9.11□□□□□ -0.95
LSM8-204ENST00000424702 STK32BQ9NY57 414 aa9.11□□□□□ -0.95
LSM8-204ENST00000424702 CENPQQ7L2Z9 268 aaPredicted RBP9.1□□□□□ -0.95
LSM8-204ENST00000424702 ACSBG1Q96GR2 724 aa9.1□□□□□ -0.95
LSM8-204ENST00000424702 RNF123Q5XPI4 1314 aa9.1□□□□□ -0.95
LSM8-204ENST00000424702 RIC3Q7Z5B4 369 aa9.1□□□□□ -0.95
LSM8-204ENST00000424702 SLC52A2Q9HAB3 445 aa9.1□□□□□ -0.95
LSM8-204ENST00000424702 PTCD1O75127 700 aaKnown RBP9.1□□□□□ -0.95
LSM8-204ENST00000424702 RGS3P49796 1198 aa9.1□□□□□ -0.95
LSM8-204ENST00000424702 FKBP5Q13451 457 aaPredicted RBP9.1□□□□□ -0.95
LSM8-204ENST00000424702 ALDH1L2Q3SY69 923 aa9.1□□□□□ -0.95
LSM8-204ENST00000424702 SSH1Q8WYL5 1049 aa9.09□□□□□ -0.95
LSM8-204ENST00000424702 MBIPQ9NS73 344 aa9.09□□□□□ -0.95
LSM8-204ENST00000424702 AXIN2Q9Y2T1 843 aa9.09□□□□□ -0.95
LSM8-204ENST00000424702 ATF7IPQ6VMQ6 1270 aa9.09□□□□□ -0.95
LSM8-204ENST00000424702 TRMT2AQ8IZ69 625 aaKnown RBP9.09□□□□□ -0.95
LSM8-204ENST00000424702 FLAD1Q8NFF5 587 aa9.09□□□□□ -0.95
LSM8-204ENST00000424702 HYPKQ9NX55 129 aa9.09□□□□□ -0.95
LSM8-204ENST00000424702 NOB1Q9ULX3 412 aaKnown RBP9.09□□□□□ -0.95
LSM8-204ENST00000424702 RGPD8O14715 1765 aaPredicted RBP9.09□□□□□ -0.95
LSM8-204ENST00000424702 HMMRO75330 724 aa9.09□□□□□ -0.95
LSM8-204ENST00000424702 C20orf194Q5TEA3 1177 aa9.09□□□□□ -0.95
LSM8-204ENST00000424702 PIK3C2AO00443 1686 aa9.09□□□□□ -0.95
LSM8-204ENST00000424702 KDRP35968 1356 aa9.09□□□□□ -0.96
LSM8-204ENST00000424702 ZPR1O75312 459 aa9.08□□□□□ -0.96
LSM8-204ENST00000424702 ANP32AP39687 249 aaKnown RBP9.08□□□□□ -0.96
LSM8-204ENST00000424702 SLC4A10Q6U841 1118 aa9.08□□□□□ -0.96
LSM8-204ENST00000424702 DBF4Q9UBU7 674 aaPredicted RBP9.08□□□□□ -0.96
LSM8-204ENST00000424702 PRIM1P49642 420 aaKnown RBP9.08□□□□□ -0.96
LSM8-204ENST00000424702 CCNL1Q9UK58 526 aaPredicted RBP9.08□□□□□ -0.96
LSM8-204ENST00000424702 MAP2P11137 1827 aaKnown RBP9.08□□□□□ -0.96
LSM8-204ENST00000424702 ERBB4Q15303 1308 aa9.08□□□□□ -0.96
LSM8-204ENST00000424702 APBA3O96018 575 aa9.08□□□□□ -0.96
LSM8-204ENST00000424702 ATP6V1AP38606 617 aa9.08□□□□□ -0.96
LSM8-204ENST00000424702 NECTIN2Q92692 538 aa9.08□□□□□ -0.96
LSM8-204ENST00000424702 MIS18AQ9NYP9 233 aa9.08□□□□□ -0.96
LSM8-204ENST00000424702 NRKQ7Z2Y5 1582 aa9.08□□□□□ -0.96
LSM8-204ENST00000424702 NFAT5O94916 1531 aa9.07□□□□□ -0.96
LSM8-204ENST00000424702 TAF7LQ5H9L4 462 aa9.07□□□□□ -0.96
LSM8-204ENST00000424702 COL16A1Q07092 1604 aaPredicted RBP9.07□□□□□ -0.96
LSM8-204ENST00000424702 OS9Q13438 667 aaPredicted RBP9.07□□□□□ -0.96
LSM8-204ENST00000424702 CCDC125Q86Z20 511 aa9.07□□□□□ -0.96
LSM8-204ENST00000424702 TNS2Q63HR2 1409 aa9.07□□□□□ -0.96
LSM8-204ENST00000424702 NFATC2IPQ8NCF5 419 aa9.07□□□□□ -0.96
LSM8-204ENST00000424702 MVPQ14764 893 aaKnown RBP9.06□□□□□ -0.96
LSM8-204ENST00000424702 C9orf78Q9NZ63 289 aaPredicted RBP9.06□□□□□ -0.96
LSM8-204ENST00000424702 COL3A1P02461 1466 aaPredicted RBP9.06□□□□□ -0.96
LSM8-204ENST00000424702 KAT6BQ8WYB5 2073 aa9.06□□□□□ -0.96
LSM8-204ENST00000424702 FAM208AQ9UK61 1670 aaKnown RBP9.06□□□□□ -0.96
LSM8-204ENST00000424702 RTCBQ9Y3I0 505 aaKnown RBP9.06□□□□□ -0.96
LSM8-204ENST00000424702 SLC4A2P04920 1241 aa9.05□□□□□ -0.96
LSM8-204ENST00000424702 ZNF790Q6PG37 636 aa9.05□□□□□ -0.96
LSM8-204ENST00000424702 ILDR1Q86SU0 546 aaPredicted RBP9.05□□□□□ -0.96
LSM8-204ENST00000424702 UPF2Q9HAU5 1272 aaKnown RBP9.05□□□□□ -0.96
LSM8-204ENST00000424702 CCT4P50991 539 aaKnown RBP9.05□□□□□ -0.96
LSM8-204ENST00000424702 SHPRHQ149N8 1683 aa9.05□□□□□ -0.96
LSM8-204ENST00000424702 EIF5BO60841 1220 aaKnown RBP9.05□□□□□ -0.96
LSM8-204ENST00000424702 RFC4P35249 363 aa9.04□□□□□ -0.96
LSM8-204ENST00000424702 AIMP1Q12904 312 aaKnown RBP9.04□□□□□ -0.96
LSM8-204ENST00000424702 TRPM3Q9HCF6 1732 aaPredicted RBP9.04□□□□□ -0.96
LSM8-204ENST00000424702 ALS2Q96Q42 1657 aa9.04□□□□□ -0.96
LSM8-204ENST00000424702 GNAI3P08754 354 aa9.04□□□□□ -0.96
LSM8-204ENST00000424702 C8orf58Q8NAV2 365 aa9.04□□□□□ -0.96
LSM8-204ENST00000424702 VAMP4O75379 141 aa9.04□□□□□ -0.96
LSM8-204ENST00000424702 TRIM27P14373 513 aa9.04□□□□□ -0.96
LSM8-204ENST00000424702 SLIT2O94813 1529 aa9.04□□□□□ -0.96
LSM8-204ENST00000424702 PTPRCP08575 1304 aa9.03□□□□□ -0.96
LSM8-204ENST00000424702 PHRF1Q9P1Y6 1649 aaKnown RBP9.03□□□□□ -0.96
LSM8-204ENST00000424702 CHL1O00533 1208 aa9.03□□□□□ -0.96
LSM8-204ENST00000424702 SLC27A3Q5K4L6 730 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms