RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 TUBGCP6Q96RT7 1819 aa12.86□□□□□ -0.35
NUP50-205ENST00000419387 TOGARAM1Q9Y4F4 1720 aa12.86□□□□□ -0.35
NUP50-205ENST00000419387 AMOTQ4VCS5 1084 aa12.86□□□□□ -0.35
NUP50-205ENST00000419387 LOC102724428A0A0B4J2F2 783 aa12.85□□□□□ -0.35
NUP50-205ENST00000419387 ERVV-2B6SEH9 535 aa12.85□□□□□ -0.35
NUP50-205ENST00000419387 PER1O15534 1290 aaPredicted RBP12.85□□□□□ -0.35
NUP50-205ENST00000419387 HSP90AB1P08238 724 aaKnown RBP12.85□□□□□ -0.35
NUP50-205ENST00000419387 SIK1P57059 783 aa12.85□□□□□ -0.35
NUP50-205ENST00000419387 KLHL34Q8N239 644 aa12.85□□□□□ -0.35
NUP50-205ENST00000419387 AK7Q96M32 723 aa12.85□□□□□ -0.35
NUP50-205ENST00000419387 ASAP1Q9ULH1 1129 aa12.85□□□□□ -0.35
NUP50-205ENST00000419387 ZBTB12Q9Y330 459 aaPredicted RBP12.85□□□□□ -0.35
NUP50-205ENST00000419387 C5P01031 1676 aa12.84□□□□□ -0.35
NUP50-205ENST00000419387 IL13P35225 146 aa12.84□□□□□ -0.35
NUP50-205ENST00000419387 DCAF5Q96JK2 942 aa12.84□□□□□ -0.35
NUP50-205ENST00000419387 COL24A1Q17RW2 1714 aa12.84□□□□□ -0.35
NUP50-205ENST00000419387 ATP6V1AP38606 617 aa12.83□□□□□ -0.36
NUP50-205ENST00000419387 MSL1Q68DK7 614 aa12.83□□□□□ -0.36
NUP50-205ENST00000419387 SULT6B1Q6IMI4 303 aa12.83□□□□□ -0.36
NUP50-205ENST00000419387 ZNF530Q6P9A1 599 aaPredicted RBP12.83□□□□□ -0.36
NUP50-205ENST00000419387 AEBP1Q8IUX7 1158 aa12.83□□□□□ -0.36
NUP50-205ENST00000419387 ATG3Q9NT62 314 aa12.83□□□□□ -0.36
NUP50-205ENST00000419387 FOXD4L1Q9NU39 408 aa12.83□□□□□ -0.36
NUP50-205ENST00000419387 MTHFSP49914 203 aa12.82□□□□□ -0.36
NUP50-205ENST00000419387 GPR162Q16538 588 aa12.82□□□□□ -0.36
NUP50-205ENST00000419387 LINC00116Q8NCU8 138 aa12.82□□□□□ -0.36
NUP50-205ENST00000419387 TAF1LQ8IZX4 1826 aa12.82□□□□□ -0.36
NUP50-205ENST00000419387 PHF14O94880 888 aa12.81□□□□□ -0.36
NUP50-205ENST00000419387 SSFA2P28290 1259 aa12.81□□□□□ -0.36
NUP50-205ENST00000419387 CABP4P57796 275 aa12.81□□□□□ -0.36
NUP50-205ENST00000419387 ITPK1Q13572 414 aa12.81□□□□□ -0.36
NUP50-205ENST00000419387 C1orf141Q5JVX7 400 aa12.81□□□□□ -0.36
NUP50-205ENST00000419387 CC2D1BQ5T0F9 858 aaKnown RBP12.81□□□□□ -0.36
NUP50-205ENST00000419387 AMIGO3Q86WK7 504 aa12.81□□□□□ -0.36
NUP50-205ENST00000419387 C4BP0C0L5 1744 aa12.81□□□□□ -0.36
NUP50-205ENST00000419387 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.8□□□□□ -0.36
NUP50-205ENST00000419387 SMIM5Q71RC9 77 aa12.8□□□□□ -0.36
NUP50-205ENST00000419387 NLGN2Q8NFZ4 835 aa12.8□□□□□ -0.36
NUP50-205ENST00000419387 KDRP35968 1356 aa12.8□□□□□ -0.36
NUP50-205ENST00000419387 GNPATO15228 680 aa12.79□□□□□ -0.36
NUP50-205ENST00000419387 SLC4A9Q96Q91 983 aa12.79□□□□□ -0.36
NUP50-205ENST00000419387 KDM6AO15550 1401 aaPredicted RBP12.79□□□□□ -0.36
NUP50-205ENST00000419387 PELP1Q8IZL8 1130 aaKnown RBP12.78□□□□□ -0.36
NUP50-205ENST00000419387 DIAPH1O60610 1272 aaKnown RBP12.77□□□□□ -0.37
NUP50-205ENST00000419387 HMOX1P09601 288 aa12.77□□□□□ -0.37
NUP50-205ENST00000419387 AKAP4Q5JQC9 854 aa12.77□□□□□ -0.37
NUP50-205ENST00000419387 RC3H1Q5TC82 1133 aaKnown RBP12.77□□□□□ -0.37
NUP50-205ENST00000419387 NFATC2IPQ8NCF5 419 aa12.77□□□□□ -0.37
NUP50-205ENST00000419387 CD2APQ9Y5K6 639 aa12.77□□□□□ -0.37
NUP50-205ENST00000419387 NPC1L1Q9UHC9 1359 aa12.77□□□□□ -0.37
NUP50-205ENST00000419387 UBR3Q6ZT12 1888 aa12.76□□□□□ -0.37
NUP50-205ENST00000419387 CNGB1Q14028 1251 aaPredicted RBP12.76□□□□□ -0.37
NUP50-205ENST00000419387 TRAPPC3LQ5T215 181 aa12.76□□□□□ -0.37
NUP50-205ENST00000419387 RTCBQ9Y3I0 505 aaKnown RBP12.76□□□□□ -0.37
NUP50-205ENST00000419387 PTCD1O75127 700 aaKnown RBP12.75□□□□□ -0.37
NUP50-205ENST00000419387 ZNF784Q8NCA9 323 aaPredicted RBP12.75□□□□□ -0.37
NUP50-205ENST00000419387 CNTNAP4Q9C0A0 1308 aa12.74□□□□□ -0.37
NUP50-205ENST00000419387 GRIN3BO60391 1043 aa12.74□□□□□ -0.37
NUP50-205ENST00000419387 RPS6KA4O75676 772 aa12.74□□□□□ -0.37
NUP50-205ENST00000419387 ARHGEF1Q92888 912 aaKnown RBP12.74□□□□□ -0.37
NUP50-205ENST00000419387 LGR6Q9HBX8 967 aa12.74□□□□□ -0.37
NUP50-205ENST00000419387 CHD4Q14839 1912 aa12.73□□□□□ -0.37
NUP50-205ENST00000419387 RNMTO43148 476 aaKnown RBP12.73□□□□□ -0.37
NUP50-205ENST00000419387 YBX3P16989 372 aaKnown RBP eCLIP12.73□□□□□ -0.37
NUP50-205ENST00000419387 MTHFSDQ2M296 383 aaKnown RBP12.73□□□□□ -0.37
NUP50-205ENST00000419387 SLC52A2Q9HAB3 445 aa12.73□□□□□ -0.37
NUP50-205ENST00000419387 ZNF831Q5JPB2 1677 aa12.73□□□□□ -0.37
NUP50-205ENST00000419387 UTRNP46939 3433 aa12.72□□□□□ -0.37
NUP50-205ENST00000419387 NLGN1Q8N2Q7 840 aa12.72□□□□□ -0.37
NUP50-205ENST00000419387 U2SURPO15042 1029 aaKnown RBP12.71□□□□□ -0.37
NUP50-205ENST00000419387 MMP10P09238 476 aa12.71□□□□□ -0.37
NUP50-205ENST00000419387 RFC4P35249 363 aa12.71□□□□□ -0.37
NUP50-205ENST00000419387 CRKLP46109 303 aaKnown RBP12.71□□□□□ -0.37
NUP50-205ENST00000419387 REM2Q8IYK8 340 aaPredicted RBP12.7□□□□□ -0.38
NUP50-205ENST00000419387 SCN11AQ9UI33 1791 aa12.69□□□□□ -0.38
NUP50-205ENST00000419387 GYS1P13807 737 aa12.69□□□□□ -0.38
NUP50-205ENST00000419387 SLC39A6Q13433 755 aa12.69□□□□□ -0.38
NUP50-205ENST00000419387 COL3A1P02461 1466 aaPredicted RBP12.69□□□□□ -0.38
NUP50-205ENST00000419387 COL5A3P25940 1745 aaPredicted RBP12.68□□□□□ -0.38
NUP50-205ENST00000419387 INTS5Q6P9B9 1019 aaKnown RBP12.68□□□□□ -0.38
NUP50-205ENST00000419387 SP7Q8TDD2 431 aaPredicted RBP12.68□□□□□ -0.38
NUP50-205ENST00000419387 CFAP53Q96M91 514 aa12.68□□□□□ -0.38
NUP50-205ENST00000419387 MYH14Q7Z406 1995 aaKnown RBP12.67□□□□□ -0.38
NUP50-205ENST00000419387 DNAJC10Q8IXB1 793 aa12.67□□□□□ -0.38
NUP50-205ENST00000419387 GAS2L2Q8NHY3 880 aa12.67□□□□□ -0.38
NUP50-205ENST00000419387 PARP3Q9Y6F1 533 aa12.67□□□□□ -0.38
NUP50-205ENST00000419387 GNAT3A8MTJ3 354 aa12.66□□□□□ -0.38
NUP50-205ENST00000419387 CYP19A1P11511 503 aaPredicted RBP12.66□□□□□ -0.38
NUP50-205ENST00000419387 TGFB2P61812 414 aa12.66□□□□□ -0.38
NUP50-205ENST00000419387 VSIG10Q8N0Z9 540 aa12.66□□□□□ -0.38
NUP50-205ENST00000419387 IL17REQ8NFR9 667 aa12.66□□□□□ -0.38
NUP50-205ENST00000419387 CCDC87Q9NVE4 849 aa12.66□□□□□ -0.38
NUP50-205ENST00000419387 SRP68Q9UHB9 627 aaKnown RBP12.66□□□□□ -0.38
NUP50-205ENST00000419387 NUDCQ9Y266 331 aa12.66□□□□□ -0.38
NUP50-205ENST00000419387 MRC1P22897 1456 aa12.65□□□□□ -0.38
NUP50-205ENST00000419387 PPP2R1AP30153 589 aa12.65□□□□□ -0.38
NUP50-205ENST00000419387 WWC3Q9ULE0 1092 aa12.65□□□□□ -0.38
NUP50-205ENST00000419387 TJP1Q07157 1748 aa12.65□□□□□ -0.38
NUP50-205ENST00000419387 USP42Q9H9J4 1324 aaKnown RBP12.64□□□□□ -0.39
NUP50-205ENST00000419387 CICQ96RK0 1608 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms