RNA–Protein interactions for RNA: ENST00000418994.1

CAPN7-203, Transcript of calpain 7, humanhuman

TSL 5

Gene CAPN7, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-203ENST00000418994 GAS2L2Q8NHY3 880 aa34.86■■■■□ 3.17
CAPN7-203ENST00000418994 MTFR1LQ9H019 292 aa34.86■■■■□ 3.17
CAPN7-203ENST00000418994 RNMTO43148 476 aaKnown RBP34.85■■■■□ 3.17
CAPN7-203ENST00000418994 LGR6Q9HBX8 967 aa34.85■■■■□ 3.17
CAPN7-203ENST00000418994 ATF5Q9Y2D1 282 aaPredicted RBP34.84■■■■□ 3.17
CAPN7-203ENST00000418994 ATP6V1AP38606 617 aa34.83■■■■□ 3.17
CAPN7-203ENST00000418994 C4BP0C0L5 1744 aa34.83■■■■□ 3.17
CAPN7-203ENST00000418994 FCHSD2O94868 740 aa34.82■■■■□ 3.16
CAPN7-203ENST00000418994 SLC52A2Q9HAB3 445 aa34.82■■■■□ 3.16
CAPN7-203ENST00000418994 PPP1R1BQ9UD71 204 aaPredicted RBP34.82■■■■□ 3.16
CAPN7-203ENST00000418994 PHACTR3Q96KR7 559 aa34.81■■■■□ 3.16
CAPN7-203ENST00000418994 MRC1P22897 1456 aa34.81■■■■□ 3.16
CAPN7-203ENST00000418994 ADAMTS7Q9UKP4 1686 aa34.8■■■■□ 3.16
CAPN7-203ENST00000418994 MAP3K5Q99683 1374 aa34.8■■■■□ 3.16
CAPN7-203ENST00000418994 ITPK1Q13572 414 aa34.8■■■■□ 3.16
CAPN7-203ENST00000418994 LINC00116Q8NCU8 138 aa34.8■■■■□ 3.16
CAPN7-203ENST00000418994 SLC16A10Q8TF71 515 aa34.8■■■■□ 3.16
CAPN7-203ENST00000418994 RBM42Q9BTD8 480 aaKnown RBP34.8■■■■□ 3.16
CAPN7-203ENST00000418994 PTGER2P43116 358 aa34.79■■■■□ 3.16
CAPN7-203ENST00000418994 AK7Q96M32 723 aa34.79■■■■□ 3.16
CAPN7-203ENST00000418994 VIRMAQ69YN4 1812 aaKnown RBP34.78■■■■□ 3.16
CAPN7-203ENST00000418994 GNAT3A8MTJ3 354 aa34.78■■■■□ 3.16
CAPN7-203ENST00000418994 ZNF831Q5JPB2 1677 aa34.76■■■■□ 3.16
CAPN7-203ENST00000418994 SLC4A9Q96Q91 983 aa34.76■■■■□ 3.16
CAPN7-203ENST00000418994 MYBBP1AQ9BQG0 1328 aaKnown RBP34.76■■■■□ 3.15
CAPN7-203ENST00000418994 COL23A1Q86Y22 540 aaPredicted RBP34.75■■■■□ 3.15
CAPN7-203ENST00000418994 FLAD1Q8NFF5 587 aa34.75■■■■□ 3.15
CAPN7-203ENST00000418994 MSH5O43196 834 aa34.74■■■■□ 3.15
CAPN7-203ENST00000418994 PTCD1O75127 700 aaKnown RBP34.73■■■■□ 3.15
CAPN7-203ENST00000418994 SGIP1Q9BQI5 828 aa34.73■■■■□ 3.15
CAPN7-203ENST00000418994 IL17REQ8NFR9 667 aa34.71■■■■□ 3.15
CAPN7-203ENST00000418994 UBR3Q6ZT12 1888 aa34.69■■■■□ 3.14
CAPN7-203ENST00000418994 AMIGO3Q86WK7 504 aa34.69■■■■□ 3.14
CAPN7-203ENST00000418994 GNPATO15228 680 aa34.67■■■■□ 3.14
CAPN7-203ENST00000418994 TEFQ10587 303 aa34.67■■■■□ 3.14
CAPN7-203ENST00000418994 SLC39A6Q13433 755 aa34.67■■■■□ 3.14
CAPN7-203ENST00000418994 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.66■■■■□ 3.14
CAPN7-203ENST00000418994 ZNF316A6NFI3 1004 aaPredicted RBP34.66■■■■□ 3.14
CAPN7-203ENST00000418994 PHF14O94880 888 aa34.66■■■■□ 3.14
CAPN7-203ENST00000418994 NEFMP07197 916 aa34.66■■■■□ 3.14
CAPN7-203ENST00000418994 SSFA2P28290 1259 aa34.66■■■■□ 3.14
CAPN7-203ENST00000418994 PRKRIP1Q9H875 184 aaPredicted RBP34.66■■■■□ 3.14
CAPN7-203ENST00000418994 COL5A3P25940 1745 aaPredicted RBP34.66■■■■□ 3.14
CAPN7-203ENST00000418994 CEMIPQ8WUJ3 1361 aa34.65■■■■□ 3.14
CAPN7-203ENST00000418994 COL24A1Q17RW2 1714 aa34.65■■■■□ 3.14
CAPN7-203ENST00000418994 CNTNAP4Q9C0A0 1308 aa34.64■■■■□ 3.14
CAPN7-203ENST00000418994 POLD1P28340 1107 aa34.64■■■■□ 3.14
CAPN7-203ENST00000418994 RC3H1Q5TC82 1133 aaKnown RBP34.64■■■■□ 3.14
CAPN7-203ENST00000418994 SMIM5Q71RC9 77 aa34.63■■■■□ 3.13
CAPN7-203ENST00000418994 ARXQ96QS3 562 aa34.63■■■■□ 3.13
CAPN7-203ENST00000418994 PNNQ9H307 717 aaKnown RBP34.63■■■■□ 3.13
CAPN7-203ENST00000418994 RTF1Q92541 710 aaKnown RBP34.62■■■■□ 3.13
CAPN7-203ENST00000418994 PLEKHF1Q96S99 279 aa34.62■■■■□ 3.13
CAPN7-203ENST00000418994 CICQ96RK0 1608 aaPredicted RBP34.62■■■■□ 3.13
CAPN7-203ENST00000418994 KCPQ6ZWJ8 1503 aa34.61■■■■□ 3.13
CAPN7-203ENST00000418994 TJP1Q07157 1748 aa34.61■■■■□ 3.13
CAPN7-203ENST00000418994 SIPA1L3O60292 1781 aaPredicted RBP34.6■■■■□ 3.13
CAPN7-203ENST00000418994 RTCBQ9Y3I0 505 aaKnown RBP34.6■■■■□ 3.13
CAPN7-203ENST00000418994 HTATSF1O43719 755 aaKnown RBP34.59■■■■□ 3.13
CAPN7-203ENST00000418994 MSL1Q68DK7 614 aa34.59■■■■□ 3.13
CAPN7-203ENST00000418994 TTC5Q8N0Z6 440 aa34.59■■■■□ 3.13
CAPN7-203ENST00000418994 MCM10Q7L590 875 aa34.57■■■■□ 3.12
CAPN7-203ENST00000418994 FHDC1Q9C0D6 1143 aaPredicted RBP34.57■■■■□ 3.12
CAPN7-203ENST00000418994 UBR2Q8IWV8 1755 aa34.57■■■■□ 3.12
CAPN7-203ENST00000418994 MAPK8IP3Q9UPT6 1336 aa34.56■■■■□ 3.12
CAPN7-203ENST00000418994 CRKLP46109 303 aaKnown RBP34.56■■■■□ 3.12
CAPN7-203ENST00000418994 DNAJC10Q8IXB1 793 aa34.56■■■■□ 3.12
CAPN7-203ENST00000418994 MYH14Q7Z406 1995 aaKnown RBP34.56■■■■□ 3.12
CAPN7-203ENST00000418994 RPS6KA4O75676 772 aa34.55■■■■□ 3.12
CAPN7-203ENST00000418994 TRAPPC3LQ5T215 181 aa34.55■■■■□ 3.12
CAPN7-203ENST00000418994 ZNF790Q6PG37 636 aa34.55■■■■□ 3.12
CAPN7-203ENST00000418994 VSIG10Q8N0Z9 540 aa34.55■■■■□ 3.12
CAPN7-203ENST00000418994 ADRA2BP18089 450 aa34.54■■■■□ 3.12
CAPN7-203ENST00000418994 DCTN1Q14203 1278 aa34.53■■■■□ 3.12
CAPN7-203ENST00000418994 NFE2L2Q16236 605 aa34.53■■■■□ 3.12
CAPN7-203ENST00000418994 BTBD11A6QL63 1104 aa34.52■■■■□ 3.12
CAPN7-203ENST00000418994 SYT17Q9BSW7 474 aa34.52■■■■□ 3.12
CAPN7-203ENST00000418994 INTS5Q6P9B9 1019 aaKnown RBP34.5■■■■□ 3.11
CAPN7-203ENST00000418994 ZNF496Q96IT1 587 aaPredicted RBP34.5■■■■□ 3.11
CAPN7-203ENST00000418994 CYP19A1P11511 503 aaPredicted RBP34.49■■■■□ 3.11
CAPN7-203ENST00000418994 WDR43Q15061 677 aaKnown RBP eCLIP34.49■■■■□ 3.11
CAPN7-203ENST00000418994 ARHGEF1Q92888 912 aaKnown RBP34.49■■■■□ 3.11
CAPN7-203ENST00000418994 CCDC87Q9NVE4 849 aa34.49■■■■□ 3.11
CAPN7-203ENST00000418994 DLG5Q8TDM6 1919 aa34.49■■■■□ 3.11
CAPN7-203ENST00000418994 HEG1Q9ULI3 1381 aa34.48■■■■□ 3.11
CAPN7-203ENST00000418994 RFC4P35249 363 aa34.46■■■■□ 3.11
CAPN7-203ENST00000418994 FMNL2Q96PY5 1086 aa34.46■■■■□ 3.11
CAPN7-203ENST00000418994 KCNQ3O43525 872 aa34.45■■■■□ 3.11
CAPN7-203ENST00000418994 KLHL34Q8N239 644 aa34.45■■■■□ 3.11
CAPN7-203ENST00000418994 STARD3NLO95772 234 aa34.42■■■■□ 3.1
CAPN7-203ENST00000418994 TAF7Q15545 349 aaPredicted RBP34.42■■■■□ 3.1
CAPN7-203ENST00000418994 TEX13AQ9BXU3 409 aaPredicted RBP34.42■■■■□ 3.1
CAPN7-203ENST00000418994 C4AP0C0L4 1744 aa34.41■■■■□ 3.1
CAPN7-203ENST00000418994 SOS1Q07889 1333 aaPredicted RBP34.41■■■■□ 3.1
CAPN7-203ENST00000418994 DCAF8L1A6NGE4 600 aa34.4■■■■□ 3.1
CAPN7-203ENST00000418994 CCDC146Q8IYE0 955 aa34.4■■■■□ 3.1
CAPN7-203ENST00000418994 ADAMTS8Q9UP79 889 aa34.4■■■■□ 3.1
CAPN7-203ENST00000418994 ZBTB1Q9Y2K1 713 aa34.4■■■■□ 3.1
CAPN7-203ENST00000418994 NLGN1Q8N2Q7 840 aa34.39■■■■□ 3.1
CAPN7-203ENST00000418994 GYS1P13807 737 aa34.38■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms