RNA–Protein interactions for RNA: ENST00000417962.5

SHISA5-204, Transcript of shisa family member 5, humanhuman

TSL 2

Gene SHISA5, Length 2,306 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-204ENST00000417962 CADPS2Q86UW7 1296 aa23.33■■□□□ 1.33
SHISA5-204ENST00000417962 DDX17Q92841 729 aaKnown RBP23.33■■□□□ 1.33
SHISA5-204ENST00000417962 MFAP1P55081 439 aaKnown RBP23.32■■□□□ 1.32
SHISA5-204ENST00000417962 TEFQ10587 303 aa23.32■■□□□ 1.32
SHISA5-204ENST00000417962 C1orf141Q5JVX7 400 aa23.32■■□□□ 1.32
SHISA5-204ENST00000417962 HDGFL1Q5TGJ6 251 aa23.32■■□□□ 1.32
SHISA5-204ENST00000417962 MPRIPQ6WCQ1 1025 aa23.32■■□□□ 1.32
SHISA5-204ENST00000417962 PXDNQ92626 1479 aa23.31■■□□□ 1.32
SHISA5-204ENST00000417962 EIF4A1P60842 406 aaKnown RBP23.31■■□□□ 1.32
SHISA5-204ENST00000417962 BECN1Q14457 450 aa23.31■■□□□ 1.32
SHISA5-204ENST00000417962 ERBB3P21860 1342 aa23.3■■□□□ 1.32
SHISA5-204ENST00000417962 NPHP3Q7Z494 1330 aa23.3■■□□□ 1.32
SHISA5-204ENST00000417962 RTL5Q5HYW3 569 aaPredicted RBP23.3■■□□□ 1.32
SHISA5-204ENST00000417962 C22orf23Q9BZE7 217 aa23.29■■□□□ 1.32
SHISA5-204ENST00000417962 BTBD11A6QL63 1104 aa23.28■■□□□ 1.32
SHISA5-204ENST00000417962 RNMTO43148 476 aaKnown RBP23.28■■□□□ 1.32
SHISA5-204ENST00000417962 USP35Q9P2H5 1018 aa23.28■■□□□ 1.32
SHISA5-204ENST00000417962 HOXB7P09629 217 aa23.28■■□□□ 1.32
SHISA5-204ENST00000417962 N4BP2Q86UW6 1770 aaPredicted RBP23.28■■□□□ 1.32
SHISA5-204ENST00000417962 HMMRO75330 724 aa23.27■■□□□ 1.32
SHISA5-204ENST00000417962 DEKP35659 375 aaKnown RBP23.27■■□□□ 1.32
SHISA5-204ENST00000417962 OVOS2A0A0G2JMS6 1433 aa23.27■■□□□ 1.32
SHISA5-204ENST00000417962 GNAI2P04899 355 aa23.26■■□□□ 1.31
SHISA5-204ENST00000417962 CHMP4AQ9BY43 222 aa23.26■■□□□ 1.31
SHISA5-204ENST00000417962 PXDNLA1KZ92 1463 aa23.26■■□□□ 1.31
SHISA5-204ENST00000417962 KCNQ3O43525 872 aa23.26■■□□□ 1.31
SHISA5-204ENST00000417962 EIF2S2P20042 333 aaKnown RBP23.26■■□□□ 1.31
SHISA5-204ENST00000417962 TNS3Q68CZ2 1445 aa23.25■■□□□ 1.31
SHISA5-204ENST00000417962 PLEKHM2Q8IWE5 1019 aa23.25■■□□□ 1.31
SHISA5-204ENST00000417962 GNAI3P08754 354 aa23.25■■□□□ 1.31
SHISA5-204ENST00000417962 PHAXQ9H814 394 aaKnown RBP23.25■■□□□ 1.31
SHISA5-204ENST00000417962 XIRP1Q702N8 1843 aaKnown RBP23.24■■□□□ 1.31
SHISA5-204ENST00000417962 COL18A1P39060 1754 aa23.23■■□□□ 1.31
SHISA5-204ENST00000417962 CABLES1Q8TDN4 633 aa23.22■■□□□ 1.31
SHISA5-204ENST00000417962 BCL11AQ9H165 835 aa23.22■■□□□ 1.31
SHISA5-204ENST00000417962 NLRP2Q9NX02 1062 aa23.22■■□□□ 1.31
SHISA5-204ENST00000417962 C16orf71Q8IYS4 520 aaPredicted RBP23.21■■□□□ 1.31
SHISA5-204ENST00000417962 RAPGEF4Q8WZA2 1011 aa23.21■■□□□ 1.31
SHISA5-204ENST00000417962 LMTK3Q96Q04 1460 aa23.21■■□□□ 1.31
SHISA5-204ENST00000417962 APBB1O00213 710 aa23.21■■□□□ 1.31
SHISA5-204ENST00000417962 CHPF2Q9P2E5 772 aa23.21■■□□□ 1.31
SHISA5-204ENST00000417962 SIPA1L3O60292 1781 aaPredicted RBP23.21■■□□□ 1.31
SHISA5-204ENST00000417962 CRYBG1Q9Y4K1 1723 aa23.21■■□□□ 1.31
SHISA5-204ENST00000417962 SPATA31A3Q5VYP0 1347 aa23.2■■□□□ 1.3
SHISA5-204ENST00000417962 SMARCA5O60264 1052 aaPredicted RBP23.2■■□□□ 1.3
SHISA5-204ENST00000417962 ADAMTS7Q9UKP4 1686 aa23.19■■□□□ 1.3
SHISA5-204ENST00000417962 GSPT1P15170 499 aaKnown RBP23.19■■□□□ 1.3
SHISA5-204ENST00000417962 TBC1D9Q6ZT07 1266 aa23.19■■□□□ 1.3
SHISA5-204ENST00000417962 TTC22Q5TAA0 569 aa23.19■■□□□ 1.3
SHISA5-204ENST00000417962 TBC1D2Q9BYX2 928 aa23.19■■□□□ 1.3
SHISA5-204ENST00000417962 STRCQ7RTU9 1775 aa23.18■■□□□ 1.3
SHISA5-204ENST00000417962 CDC45O75419 566 aa23.17■■□□□ 1.3
SHISA5-204ENST00000417962 CSB-PGBD3P0DP91 1061 aa23.17■■□□□ 1.3
SHISA5-204ENST00000417962 TATP17735 454 aaPredicted RBP23.17■■□□□ 1.3
SHISA5-204ENST00000417962 RBM25P49756 843 aaKnown RBP23.17■■□□□ 1.3
SHISA5-204ENST00000417962 OTUD7AQ8TE49 926 aaPredicted RBP23.17■■□□□ 1.3
SHISA5-204ENST00000417962 USP44Q9H0E7 712 aa23.17■■□□□ 1.3
SHISA5-204ENST00000417962 ABCC6O95255 1503 aa23.17■■□□□ 1.3
SHISA5-204ENST00000417962 ATP8B2P98198 1209 aa23.16■■□□□ 1.3
SHISA5-204ENST00000417962 CHRNA2Q15822 529 aa23.16■■□□□ 1.3
SHISA5-204ENST00000417962 SRCIN1Q9C0H9 1055 aa23.16■■□□□ 1.3
SHISA5-204ENST00000417962 LRRFIP2Q9Y608 721 aaKnown RBP23.16■■□□□ 1.3
SHISA5-204ENST00000417962 UBTFL1P0CB47 393 aaPredicted RBP23.15■■□□□ 1.3
SHISA5-204ENST00000417962 BRINP3Q76B58 766 aa23.15■■□□□ 1.3
SHISA5-204ENST00000417962 GIGYF1O75420 1035 aaPredicted RBP23.15■■□□□ 1.3
SHISA5-204ENST00000417962 DBF4Q9UBU7 674 aaPredicted RBP23.15■■□□□ 1.3
SHISA5-204ENST00000417962 SPG7Q9UQ90 795 aa23.15■■□□□ 1.3
SHISA5-204ENST00000417962 HEG1Q9ULI3 1381 aa23.15■■□□□ 1.3
SHISA5-204ENST00000417962 SCN11AQ9UI33 1791 aa23.14■■□□□ 1.3
SHISA5-204ENST00000417962 NFKBIBQ15653 356 aa23.14■■□□□ 1.3
SHISA5-204ENST00000417962 PNMA6EA0A0J9YXQ4 647 aa23.14■■□□□ 1.29
SHISA5-204ENST00000417962 ANXA1P04083 346 aa23.14■■□□□ 1.29
SHISA5-204ENST00000417962 DNAAF4Q8WXU2 420 aa23.14■■□□□ 1.29
SHISA5-204ENST00000417962 EXOC6BQ9Y2D4 811 aa23.14■■□□□ 1.29
SHISA5-204ENST00000417962 MEGF6O75095 1541 aa23.14■■□□□ 1.29
SHISA5-204ENST00000417962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.13■■□□□ 1.29
SHISA5-204ENST00000417962 CPDO75976 1380 aa23.13■■□□□ 1.29
SHISA5-204ENST00000417962 PI4KAP2A4QPH2 592 aa23.13■■□□□ 1.29
SHISA5-204ENST00000417962 PI4KAP1Q8N8J0 262 aa23.13■■□□□ 1.29
SHISA5-204ENST00000417962 KDM4FA0A1W2PPD8 638 aa23.12■■□□□ 1.29
SHISA5-204ENST00000417962 PHKG2P15735 406 aa23.12■■□□□ 1.29
SHISA5-204ENST00000417962 SLKQ9H2G2 1235 aaPredicted RBP23.11■■□□□ 1.29
SHISA5-204ENST00000417962 KDM6AO15550 1401 aaPredicted RBP23.11■■□□□ 1.29
SHISA5-204ENST00000417962 EIF5BO60841 1220 aaKnown RBP23.1■■□□□ 1.29
SHISA5-204ENST00000417962 BEND3Q5T5X7 828 aa23.1■■□□□ 1.29
SHISA5-204ENST00000417962 IFNL2Q8IZJ0 200 aa23.1■■□□□ 1.29
SHISA5-204ENST00000417962 LRRCC1Q9C099 1032 aa23.1■■□□□ 1.29
SHISA5-204ENST00000417962 SLC52A2Q9HAB3 445 aa23.1■■□□□ 1.29
SHISA5-204ENST00000417962 PRAMEF22A3QJZ6 481 aa23.09■■□□□ 1.29
SHISA5-204ENST00000417962 ADCY9O60503 1353 aa23.09■■□□□ 1.29
SHISA5-204ENST00000417962 PLEKHG2Q9H7P9 1386 aa23.09■■□□□ 1.29
SHISA5-204ENST00000417962 ZNF335Q9H4Z2 1342 aaPredicted RBP23.09■■□□□ 1.29
SHISA5-204ENST00000417962 SDSP20132 328 aa23.08■■□□□ 1.29
SHISA5-204ENST00000417962 OSBPL3Q9H4L5 887 aa23.08■■□□□ 1.29
SHISA5-204ENST00000417962 IBTKQ9P2D0 1353 aaPredicted RBP23.08■■□□□ 1.29
SHISA5-204ENST00000417962 SLAIN2Q9P270 581 aa23.08■■□□□ 1.28
SHISA5-204ENST00000417962 PROSER3Q2NL68 480 aa23.07■■□□□ 1.28
SHISA5-204ENST00000417962 ZNF790Q6PG37 636 aa23.07■■□□□ 1.28
SHISA5-204ENST00000417962 PDE1AP54750 535 aa23.07■■□□□ 1.28
SHISA5-204ENST00000417962 HSCBQ8IWL3 235 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms