RNA–Protein interactions for RNA: ENST00000417962.5

SHISA5-204, Transcript of shisa family member 5, humanhuman

TSL 2

Gene SHISA5, Length 2,306 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-204ENST00000417962 NISCHQ9Y2I1 1504 aa40.65■■■■■ 4.1
SHISA5-204ENST00000417962 CCDC180Q9P1Z9 1646 aa35.07■■■■□ 3.2
SHISA5-204ENST00000417962 ZCCHC6Q5VYS8 1495 aaKnown RBP34.27■■■■□ 3.08
SHISA5-204ENST00000417962 SHROOM4Q9ULL8 1493 aa33.83■■■■□ 3.01
SHISA5-204ENST00000417962 DCAF8L2P0C7V8 631 aa33.58■■■□□ 2.97
SHISA5-204ENST00000417962 DCAF1Q9Y4B6 1507 aa33.52■■■□□ 2.96
SHISA5-204ENST00000417962 SUPT5HO00267 1087 aaKnown RBP32.88■■■□□ 2.85
SHISA5-204ENST00000417962 MYO15BQ96JP2 1530 aa32.84■■■□□ 2.85
SHISA5-204ENST00000417962 ABCC9O60706 1549 aa32.75■■■□□ 2.83
SHISA5-204ENST00000417962 NACADO15069 1562 aa32.52■■■□□ 2.8
SHISA5-204ENST00000417962 SCRIBQ14160 1630 aa32.49■■■□□ 2.79
SHISA5-204ENST00000417962 RB1CC1Q8TDY2 1594 aa32.11■■■□□ 2.73
SHISA5-204ENST00000417962 RSF1Q96T23 1441 aaPredicted RBP31.82■■■□□ 2.68
SHISA5-204ENST00000417962 CHIC1Q5VXU3 224 aa31.74■■■□□ 2.67
SHISA5-204ENST00000417962 CECR2Q9BXF3 1484 aa31.61■■■□□ 2.65
SHISA5-204ENST00000417962 UNC13AQ9UPW8 1703 aa31.58■■■□□ 2.65
SHISA5-204ENST00000417962 MROH2BQ7Z745 1585 aa31.48■■■□□ 2.63
SHISA5-204ENST00000417962 BAZ1AQ9NRL2 1556 aaPredicted RBP31.32■■■□□ 2.6
SHISA5-204ENST00000417962 WIZO95785 1651 aa31.29■■■□□ 2.6
SHISA5-204ENST00000417962 BICRAQ9NZM4 1560 aa31.17■■■□□ 2.58
SHISA5-204ENST00000417962 SMARCA4P51532 1647 aa31.12■■■□□ 2.57
SHISA5-204ENST00000417962 PABPN1Q86U42 306 aaKnown RBP eCLIP31.06■■■□□ 2.56
SHISA5-204ENST00000417962 TOP2AP11388 1531 aaKnown RBP30.9■■■□□ 2.54
SHISA5-204ENST00000417962 TRIM41Q8WV44 630 aa30.79■■■□□ 2.52
SHISA5-204ENST00000417962 SMARCA2P51531 1590 aa30.66■■■□□ 2.5
SHISA5-204ENST00000417962 EIF4G1Q04637 1599 aaKnown RBP30.65■■■□□ 2.5
SHISA5-204ENST00000417962 CCDC88BA6NC98 1476 aa30.65■■■□□ 2.5
SHISA5-204ENST00000417962 PEG3Q9GZU2 1588 aa30.64■■■□□ 2.5
SHISA5-204ENST00000417962 LOC105371045A0A1W2PR82 267 aa30.63■■■□□ 2.49
SHISA5-204ENST00000417962 ATAD2BQ9ULI0 1458 aa30.44■■■□□ 2.46
SHISA5-204ENST00000417962 FAM9AQ8IZU1 332 aaPredicted RBP30.35■■■□□ 2.45
SHISA5-204ENST00000417962 BAZ1BQ9UIG0 1483 aaKnown RBP30.33■■■□□ 2.45
SHISA5-204ENST00000417962 ABCC8Q09428 1581 aa30.28■■■□□ 2.44
SHISA5-204ENST00000417962 HMGXB3Q12766 1538 aa30.03■■■□□ 2.4
SHISA5-204ENST00000417962 NCAPD3P42695 1498 aa30.03■■■□□ 2.4
SHISA5-204ENST00000417962 EHMT2Q96KQ7 1210 aa29.98■■■□□ 2.39
SHISA5-204ENST00000417962 PCGF6Q9BYE7 350 aa29.94■■■□□ 2.38
SHISA5-204ENST00000417962 WRNQ14191 1432 aaPredicted RBP eCLIP29.94■■■□□ 2.38
SHISA5-204ENST00000417962 SOGA1O94964 1423 aa29.84■■■□□ 2.37
SHISA5-204ENST00000417962 SYNJ1O43426 1573 aa29.81■■■□□ 2.36
SHISA5-204ENST00000417962 EEA1Q15075 1411 aa29.79■■■□□ 2.36
SHISA5-204ENST00000417962 RUSC2Q8N2Y8 1516 aa29.71■■■□□ 2.35
SHISA5-204ENST00000417962 TRIM26Q12899 539 aaPredicted RBP29.68■■■□□ 2.34
SHISA5-204ENST00000417962 CSRNP3Q8WYN3 585 aa29.66■■■□□ 2.34
SHISA5-204ENST00000417962 CC2D2AQ9P2K1 1620 aa29.6■■■□□ 2.33
SHISA5-204ENST00000417962 TOP2BQ02880 1626 aa29.59■■■□□ 2.33
SHISA5-204ENST00000417962 CFTRP13569 1480 aa29.57■■■□□ 2.32
SHISA5-204ENST00000417962 HRCP23327 699 aa29.55■■■□□ 2.32
SHISA5-204ENST00000417962 BIVM-ERCC5R4GMW8 1640 aa29.54■■■□□ 2.32
SHISA5-204ENST00000417962 TNIKQ9UKE5 1360 aa29.5■■■□□ 2.31
SHISA5-204ENST00000417962 GOLGA3Q08378 1498 aa29.47■■■□□ 2.31
SHISA5-204ENST00000417962 PRDM2Q13029 1718 aa29.46■■■□□ 2.31
SHISA5-204ENST00000417962 CEP162Q5TB80 1403 aa29.43■■■□□ 2.3
SHISA5-204ENST00000417962 UBTFP17480 764 aaKnown RBP29.41■■■□□ 2.3
SHISA5-204ENST00000417962 KIF21BO75037 1637 aa29.4■■■□□ 2.3
SHISA5-204ENST00000417962 CEP164Q9UPV0 1460 aa29.39■■■□□ 2.3
SHISA5-204ENST00000417962 CUX1P39880 1505 aa29.38■■■□□ 2.29
SHISA5-204ENST00000417962 CADPSQ9ULU8 1353 aa29.35■■■□□ 2.29
SHISA5-204ENST00000417962 PPARGC1BQ86YN6 1023 aaKnown RBP29.21■■■□□ 2.27
SHISA5-204ENST00000417962 RAPGEF2Q9Y4G8 1499 aa29.18■■■□□ 2.26
SHISA5-204ENST00000417962 KIF27Q86VH2 1401 aa29.11■■■□□ 2.25
SHISA5-204ENST00000417962 ERICH3Q5RHP9 1530 aa29.07■■■□□ 2.24
SHISA5-204ENST00000417962 PRXQ9BXM0 1461 aa29.06■■■□□ 2.24
SHISA5-204ENST00000417962 FANCD2Q9BXW9 1451 aa29.05■■■□□ 2.24
SHISA5-204ENST00000417962 CLIP1P30622 1438 aa29.05■■■□□ 2.24
SHISA5-204ENST00000417962 FGD5Q6ZNL6 1462 aa28.97■■■□□ 2.23
SHISA5-204ENST00000417962 NESP48681 1621 aa28.96■■■□□ 2.23
SHISA5-204ENST00000417962 CUX2O14529 1486 aa28.92■■■□□ 2.22
SHISA5-204ENST00000417962 LAMC3Q9Y6N6 1575 aa28.9■■■□□ 2.22
SHISA5-204ENST00000417962 DNMBPQ6XZF7 1577 aa28.88■■■□□ 2.21
SHISA5-204ENST00000417962 VPS8Q8N3P4 1428 aa28.87■■■□□ 2.21
SHISA5-204ENST00000417962 TTBK1Q5TCY1 1321 aaPredicted RBP28.86■■■□□ 2.21
SHISA5-204ENST00000417962 RANGAP1P46060 587 aaPredicted RBP28.83■■■□□ 2.21
SHISA5-204ENST00000417962 TOPBP1Q92547 1522 aa28.8■■■□□ 2.2
SHISA5-204ENST00000417962 ZEB1P37275 1124 aaPredicted RBP28.8■■■□□ 2.2
SHISA5-204ENST00000417962 IGF1RP08069 1367 aa28.8■■■□□ 2.2
SHISA5-204ENST00000417962 DNAJC5BQ9UF47 199 aa28.75■■■□□ 2.19
SHISA5-204ENST00000417962 POLA1P09884 1462 aaPredicted RBP28.72■■■□□ 2.19
SHISA5-204ENST00000417962 RAD54L2Q9Y4B4 1467 aa28.68■■■□□ 2.18
SHISA5-204ENST00000417962 PDS5BQ9NTI5 1447 aa28.68■■■□□ 2.18
SHISA5-204ENST00000417962 ABCA10Q8WWZ4 1543 aa28.68■■■□□ 2.18
SHISA5-204ENST00000417962 CARMIL1Q5VZK9 1371 aa28.67■■■□□ 2.18
SHISA5-204ENST00000417962 ARAP1Q96P48 1450 aa28.67■■■□□ 2.18
SHISA5-204ENST00000417962 APLP2Q06481 763 aa28.66■■■□□ 2.18
SHISA5-204ENST00000417962 URB2Q14146 1524 aaKnown RBP28.65■■■□□ 2.18
SHISA5-204ENST00000417962 KIF21AQ7Z4S6 1674 aa28.59■■■□□ 2.17
SHISA5-204ENST00000417962 ARHGAP35Q9NRY4 1499 aa28.55■■■□□ 2.16
SHISA5-204ENST00000417962 WDR97A6NE52 1622 aa28.53■■■□□ 2.16
SHISA5-204ENST00000417962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.51■■■□□ 2.15
SHISA5-204ENST00000417962 CUL7Q14999 1698 aa28.47■■■□□ 2.15
SHISA5-204ENST00000417962 CCER1Q8TC90 406 aaPredicted RBP28.46■■■□□ 2.15
SHISA5-204ENST00000417962 ABCA5Q8WWZ7 1642 aa28.4■■■□□ 2.14
SHISA5-204ENST00000417962 TDRD9Q8NDG6 1382 aaKnown RBP28.35■■■□□ 2.13
SHISA5-204ENST00000417962 GAPVD1Q14C86 1478 aa28.33■■■□□ 2.13
SHISA5-204ENST00000417962 TARBP1Q13395 1621 aaKnown RBP28.3■■■□□ 2.12
SHISA5-204ENST00000417962 KANK4Q5T7N3 995 aaPredicted RBP28.3■■■□□ 2.12
SHISA5-204ENST00000417962 CTTNBP2Q8WZ74 1663 aa28.3■■■□□ 2.12
SHISA5-204ENST00000417962 MRC2Q9UBG0 1479 aa28.28■■■□□ 2.12
SHISA5-204ENST00000417962 HNRNPUL2Q1KMD3 747 aaKnown RBP28.27■■■□□ 2.12
SHISA5-204ENST00000417962 EFCAB5A4FU69 1503 aa28.2■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms