RNA–Protein interactions for RNA: ENST00000417728.5

PTPA-212, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-212ENST00000417728 CFAP44Q96MT7 982 aa13.02□□□□□ -0.33
PTPA-212ENST00000417728 FANCIQ9NVI1 1328 aa13.02□□□□□ -0.33
PTPA-212ENST00000417728 ERVV-2B6SEH9 535 aa13.01□□□□□ -0.33
PTPA-212ENST00000417728 KRT27Q7Z3Y8 459 aa13.01□□□□□ -0.33
PTPA-212ENST00000417728 MYH16Q9H6N6 1097 aa13.01□□□□□ -0.33
PTPA-212ENST00000417728 SLC52A2Q9HAB3 445 aa13.01□□□□□ -0.33
PTPA-212ENST00000417728 BABAM1Q9NWV8 329 aa13.01□□□□□ -0.33
PTPA-212ENST00000417728 NHSQ6T4R5 1651 aa13.01□□□□□ -0.33
PTPA-212ENST00000417728 SBF2Q86WG5 1849 aa13□□□□□ -0.33
PTPA-212ENST00000417728 UBR2Q8IWV8 1755 aa13□□□□□ -0.33
PTPA-212ENST00000417728 TEFQ10587 303 aa13□□□□□ -0.33
PTPA-212ENST00000417728 TAF7Q15545 349 aaPredicted RBP13□□□□□ -0.33
PTPA-212ENST00000417728 ILDR2Q71H61 639 aa13□□□□□ -0.33
PTPA-212ENST00000417728 MBIPQ9NS73 344 aa13□□□□□ -0.33
PTPA-212ENST00000417728 TSR2Q969E8 191 aaKnown RBP12.99□□□□□ -0.33
PTPA-212ENST00000417728 EP400Q96L91 3159 aa12.99□□□□□ -0.33
PTPA-212ENST00000417728 CABP4P57796 275 aa12.97□□□□□ -0.33
PTPA-212ENST00000417728 NFATC2IPQ8NCF5 419 aa12.97□□□□□ -0.33
PTPA-212ENST00000417728 TSPYL4Q9UJ04 414 aa12.97□□□□□ -0.33
PTPA-212ENST00000417728 KCPQ6ZWJ8 1503 aa12.97□□□□□ -0.33
PTPA-212ENST00000417728 BTBD11A6QL63 1104 aa12.96□□□□□ -0.33
PTPA-212ENST00000417728 TMOD3Q9NYL9 352 aa12.96□□□□□ -0.33
PTPA-212ENST00000417728 MIS18AQ9NYP9 233 aa12.96□□□□□ -0.33
PTPA-212ENST00000417728 LAS1LQ9Y4W2 734 aaKnown RBP12.96□□□□□ -0.33
PTPA-212ENST00000417728 HEG1Q9ULI3 1381 aa12.95□□□□□ -0.34
PTPA-212ENST00000417728 BTAF1O14981 1849 aa12.95□□□□□ -0.34
PTPA-212ENST00000417728 CENPBP07199 599 aaPredicted RBP12.95□□□□□ -0.34
PTPA-212ENST00000417728 FAM182BQ5T319 152 aa12.95□□□□□ -0.34
PTPA-212ENST00000417728 FAM196AQ6ZSG2 479 aa12.95□□□□□ -0.34
PTPA-212ENST00000417728 C5P01031 1676 aa12.94□□□□□ -0.34
PTPA-212ENST00000417728 KCNQ3O43525 872 aa12.94□□□□□ -0.34
PTPA-212ENST00000417728 EXOSC9Q06265 439 aaKnown RBP12.94□□□□□ -0.34
PTPA-212ENST00000417728 ZNF790Q6PG37 636 aa12.94□□□□□ -0.34
PTPA-212ENST00000417728 PIGBQ92521 554 aa12.94□□□□□ -0.34
PTPA-212ENST00000417728 CICQ96RK0 1608 aaPredicted RBP12.94□□□□□ -0.34
PTPA-212ENST00000417728 LAMB4A4D0S4 1761 aa12.94□□□□□ -0.34
PTPA-212ENST00000417728 KAT6BQ8WYB5 2073 aa12.93□□□□□ -0.34
PTPA-212ENST00000417728 CT47B1P0C2W7 299 aaPredicted RBP12.93□□□□□ -0.34
PTPA-212ENST00000417728 PRIM1P49642 420 aaKnown RBP12.93□□□□□ -0.34
PTPA-212ENST00000417728 EIF4A1P60842 406 aaKnown RBP12.93□□□□□ -0.34
PTPA-212ENST00000417728 KRT24Q2M2I5 525 aa12.93□□□□□ -0.34
PTPA-212ENST00000417728 SLC39A6Q13433 755 aa12.92□□□□□ -0.34
PTPA-212ENST00000417728 C8orf58Q8NAV2 365 aa12.92□□□□□ -0.34
PTPA-212ENST00000417728 ACSBG1Q96GR2 724 aa12.92□□□□□ -0.34
PTPA-212ENST00000417728 ZNF831Q5JPB2 1677 aa12.92□□□□□ -0.34
PTPA-212ENST00000417728 SOS1Q07889 1333 aaPredicted RBP12.91□□□□□ -0.34
PTPA-212ENST00000417728 KCNQ2O43526 872 aa12.91□□□□□ -0.34
PTPA-212ENST00000417728 TSPYL6Q8N831 410 aa12.91□□□□□ -0.34
PTPA-212ENST00000417728 ATG3Q9NT62 314 aa12.91□□□□□ -0.34
PTPA-212ENST00000417728 HOXB7P09629 217 aa12.9□□□□□ -0.34
PTPA-212ENST00000417728 TWISTNBQ3B726 338 aaPredicted RBP12.9□□□□□ -0.34
PTPA-212ENST00000417728 PTF1AQ7RTS3 328 aa12.9□□□□□ -0.34
PTPA-212ENST00000417728 SYTL4Q96C24 671 aaPredicted RBP12.9□□□□□ -0.34
PTPA-212ENST00000417728 ZNF496Q96IT1 587 aaPredicted RBP12.9□□□□□ -0.34
PTPA-212ENST00000417728 ASAP1Q9ULH1 1129 aa12.9□□□□□ -0.34
PTPA-212ENST00000417728 LY75O60449 1722 aa12.9□□□□□ -0.34
PTPA-212ENST00000417728 TJP1Q07157 1748 aa12.9□□□□□ -0.34
PTPA-212ENST00000417728 TNS1Q9HBL0 1735 aaKnown RBP12.9□□□□□ -0.34
PTPA-212ENST00000417728 VAMP4O75379 141 aa12.89□□□□□ -0.35
PTPA-212ENST00000417728 GIGYF1O75420 1035 aaPredicted RBP12.89□□□□□ -0.35
PTPA-212ENST00000417728 TTC5Q8N0Z6 440 aa12.89□□□□□ -0.35
PTPA-212ENST00000417728 ZNF428Q96B54 188 aa12.89□□□□□ -0.35
PTPA-212ENST00000417728 BCL11BQ9C0K0 894 aaPredicted RBP12.89□□□□□ -0.35
PTPA-212ENST00000417728 TRIM37O94972 964 aa12.88□□□□□ -0.35
PTPA-212ENST00000417728 CCDC125Q86Z20 511 aa12.88□□□□□ -0.35
PTPA-212ENST00000417728 FMNL2Q96PY5 1086 aa12.88□□□□□ -0.35
PTPA-212ENST00000417728 RCAN3Q9UKA8 241 aa12.88□□□□□ -0.35
PTPA-212ENST00000417728 CACNA1FO60840 1977 aa12.87□□□□□ -0.35
PTPA-212ENST00000417728 PALLDQ8WX93 1383 aa12.87□□□□□ -0.35
PTPA-212ENST00000417728 ELL2O00472 640 aaPredicted RBP12.87□□□□□ -0.35
PTPA-212ENST00000417728 UPF1Q92900 1129 aaKnown RBP eCLIP12.87□□□□□ -0.352e-15■■■■■ 50.4
PTPA-212ENST00000417728 COL5A3P25940 1745 aaPredicted RBP12.87□□□□□ -0.35
PTPA-212ENST00000417728 RGPD3A6NKT7 1758 aaPredicted RBP12.86□□□□□ -0.35
PTPA-212ENST00000417728 RGPD4Q7Z3J3 1758 aa12.86□□□□□ -0.35
PTPA-212ENST00000417728 RARSP54136 660 aaKnown RBP12.86□□□□□ -0.35
PTPA-212ENST00000417728 ALDH1L2Q3SY69 923 aa12.86□□□□□ -0.35
PTPA-212ENST00000417728 VSIG10Q8N0Z9 540 aa12.86□□□□□ -0.35
PTPA-212ENST00000417728 SMARCC1Q92922 1105 aaPredicted RBP12.86□□□□□ -0.35
PTPA-212ENST00000417728 SLC4A9Q96Q91 983 aa12.86□□□□□ -0.35
PTPA-212ENST00000417728 RREB1Q92766 1687 aa12.86□□□□□ -0.35
PTPA-212ENST00000417728 RNF123Q5XPI4 1314 aa12.86□□□□□ -0.35
PTPA-212ENST00000417728 PRAMEF22A3QJZ6 481 aa12.85□□□□□ -0.35
PTPA-212ENST00000417728 PTCD1O75127 700 aaKnown RBP12.85□□□□□ -0.35
PTPA-212ENST00000417728 SNRPA1P09661 255 aaKnown RBP12.85□□□□□ -0.35
PTPA-212ENST00000417728 SSH1Q8WYL5 1049 aa12.85□□□□□ -0.35
PTPA-212ENST00000417728 TAF1LQ8IZX4 1826 aa12.84□□□□□ -0.35
PTPA-212ENST00000417728 BRPF1P55201 1214 aaPredicted RBP12.84□□□□□ -0.35
PTPA-212ENST00000417728 LOC102724428A0A0B4J2F2 783 aa12.83□□□□□ -0.36
PTPA-212ENST00000417728 PLSCR1O15162 318 aa12.83□□□□□ -0.36
PTPA-212ENST00000417728 SIK1P57059 783 aa12.83□□□□□ -0.36
PTPA-212ENST00000417728 HDGFL1Q5TGJ6 251 aa12.83□□□□□ -0.36
PTPA-212ENST00000417728 BCAR3O75815 825 aa12.82□□□□□ -0.36
PTPA-212ENST00000417728 APBA3O96018 575 aa12.82□□□□□ -0.36
PTPA-212ENST00000417728 SF3B2Q13435 895 aaKnown RBP12.82□□□□□ -0.36
PTPA-212ENST00000417728 CCDC30Q5VVM6 783 aa12.82□□□□□ -0.36
PTPA-212ENST00000417728 DNAJC10Q8IXB1 793 aa12.82□□□□□ -0.36
PTPA-212ENST00000417728 MRPL50Q8N5N7 158 aaKnown RBP12.82□□□□□ -0.36
PTPA-212ENST00000417728 RBM42Q9BTD8 480 aaKnown RBP12.82□□□□□ -0.36
PTPA-212ENST00000417728 BCL2L13Q9BXK5 485 aa12.82□□□□□ -0.36
PTPA-212ENST00000417728 CHMP4AQ9BY43 222 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms