RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 ZBTB7AO95365 584 aa18.93■□□□□ 0.62
SLC13A3-205ENST00000417157 ATP6V1AP38606 617 aa18.93■□□□□ 0.62
SLC13A3-205ENST00000417157 NFATC2IPQ8NCF5 419 aa18.93■□□□□ 0.62
SLC13A3-205ENST00000417157 FLAD1Q8NFF5 587 aa18.93■□□□□ 0.62
SLC13A3-205ENST00000417157 AK7Q96M32 723 aa18.93■□□□□ 0.62
SLC13A3-205ENST00000417157 SLC52A2Q9HAB3 445 aa18.93■□□□□ 0.62
SLC13A3-205ENST00000417157 PNPLA7Q6ZV29 1317 aa18.93■□□□□ 0.62
SLC13A3-205ENST00000417157 MYBBP1AQ9BQG0 1328 aaKnown RBP18.93■□□□□ 0.62
SLC13A3-205ENST00000417157 SCN11AQ9UI33 1791 aa18.92■□□□□ 0.62
SLC13A3-205ENST00000417157 GNAT3A8MTJ3 354 aa18.92■□□□□ 0.62
SLC13A3-205ENST00000417157 RNMTO43148 476 aaKnown RBP18.92■□□□□ 0.62
SLC13A3-205ENST00000417157 PDGFDQ9GZP0 370 aaPredicted RBP18.91■□□□□ 0.62
SLC13A3-205ENST00000417157 PNNQ9H307 717 aaKnown RBP18.91■□□□□ 0.62
SLC13A3-205ENST00000417157 C4BP0C0L5 1744 aa18.91■□□□□ 0.62
SLC13A3-205ENST00000417157 ZNF831Q5JPB2 1677 aa18.9■□□□□ 0.62
SLC13A3-205ENST00000417157 ADAMTS7Q9UKP4 1686 aa18.9■□□□□ 0.62
SLC13A3-205ENST00000417157 RBM42Q9BTD8 480 aaKnown RBP18.9■□□□□ 0.62
SLC13A3-205ENST00000417157 TAF1LQ8IZX4 1826 aa18.89■□□□□ 0.61
SLC13A3-205ENST00000417157 LGR6Q9HBX8 967 aa18.89■□□□□ 0.61
SLC13A3-205ENST00000417157 TEFQ10587 303 aa18.88■□□□□ 0.61
SLC13A3-205ENST00000417157 ATF5Q9Y2D1 282 aaPredicted RBP18.88■□□□□ 0.61
SLC13A3-205ENST00000417157 ZNF316A6NFI3 1004 aaPredicted RBP18.87■□□□□ 0.61
SLC13A3-205ENST00000417157 MSH5O43196 834 aa18.87■□□□□ 0.61
SLC13A3-205ENST00000417157 LINC00116Q8NCU8 138 aa18.87■□□□□ 0.61
SLC13A3-205ENST00000417157 RTF1Q92541 710 aaKnown RBP18.87■□□□□ 0.61
SLC13A3-205ENST00000417157 PHACTR3Q96KR7 559 aa18.87■□□□□ 0.61
SLC13A3-205ENST00000417157 SSFA2P28290 1259 aa18.86■□□□□ 0.61
SLC13A3-205ENST00000417157 POLD1P28340 1107 aa18.86■□□□□ 0.61
SLC13A3-205ENST00000417157 ITPK1Q13572 414 aa18.86■□□□□ 0.61
SLC13A3-205ENST00000417157 TUBGCP6Q96RT7 1819 aa18.86■□□□□ 0.61
SLC13A3-205ENST00000417157 MAPK8IP3Q9UPT6 1336 aa18.85■□□□□ 0.61
SLC13A3-205ENST00000417157 PTCD1O75127 700 aaKnown RBP18.85■□□□□ 0.61
SLC13A3-205ENST00000417157 PTGER2P43116 358 aa18.85■□□□□ 0.61
SLC13A3-205ENST00000417157 TTC5Q8N0Z6 440 aa18.85■□□□□ 0.61
SLC13A3-205ENST00000417157 PRKRIP1Q9H875 184 aaPredicted RBP18.85■□□□□ 0.61
SLC13A3-205ENST00000417157 CEMIPQ8WUJ3 1361 aa18.84■□□□□ 0.61
SLC13A3-205ENST00000417157 CNTNAP4Q9C0A0 1308 aa18.84■□□□□ 0.61
SLC13A3-205ENST00000417157 GNPATO15228 680 aa18.84■□□□□ 0.61
SLC13A3-205ENST00000417157 HTATSF1O43719 755 aaKnown RBP18.84■□□□□ 0.61
SLC13A3-205ENST00000417157 COL23A1Q86Y22 540 aaPredicted RBP18.84■□□□□ 0.61
SLC13A3-205ENST00000417157 CICQ96RK0 1608 aaPredicted RBP18.84■□□□□ 0.61
SLC13A3-205ENST00000417157 RC3H1Q5TC82 1133 aaKnown RBP18.83■□□□□ 0.6
SLC13A3-205ENST00000417157 SRCAPQ6ZRS2 3230 aa18.83■□□□□ 0.6
SLC13A3-205ENST00000417157 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.82■□□□□ 0.6
SLC13A3-205ENST00000417157 PHF14O94880 888 aa18.82■□□□□ 0.6
SLC13A3-205ENST00000417157 IL17REQ8NFR9 667 aa18.82■□□□□ 0.6
SLC13A3-205ENST00000417157 SLC4A9Q96Q91 983 aa18.82■□□□□ 0.6
SLC13A3-205ENST00000417157 SGIP1Q9BQI5 828 aa18.82■□□□□ 0.6
SLC13A3-205ENST00000417157 RTCBQ9Y3I0 505 aaKnown RBP18.82■□□□□ 0.6
SLC13A3-205ENST00000417157 ADRA2BP18089 450 aa18.81■□□□□ 0.6
SLC13A3-205ENST00000417157 ARXQ96QS3 562 aa18.81■□□□□ 0.6
SLC13A3-205ENST00000417157 VIRMAQ69YN4 1812 aaKnown RBP18.81■□□□□ 0.6
SLC13A3-205ENST00000417157 COL5A3P25940 1745 aaPredicted RBP18.8■□□□□ 0.6
SLC13A3-205ENST00000417157 UBR3Q6ZT12 1888 aa18.8■□□□□ 0.6
SLC13A3-205ENST00000417157 WDR43Q15061 677 aaKnown RBP eCLIP18.8■□□□□ 0.6
SLC13A3-205ENST00000417157 VSIG10Q8N0Z9 540 aa18.8■□□□□ 0.6
SLC13A3-205ENST00000417157 KCPQ6ZWJ8 1503 aa18.79■□□□□ 0.6
SLC13A3-205ENST00000417157 SLC39A6Q13433 755 aa18.79■□□□□ 0.6
SLC13A3-205ENST00000417157 PLEKHF1Q96S99 279 aa18.79■□□□□ 0.6
SLC13A3-205ENST00000417157 TRAPPC3LQ5T215 181 aa18.78■□□□□ 0.6
SLC13A3-205ENST00000417157 ZNF790Q6PG37 636 aa18.78■□□□□ 0.6
SLC13A3-205ENST00000417157 TJP1Q07157 1748 aa18.77■□□□□ 0.6
SLC13A3-205ENST00000417157 COL24A1Q17RW2 1714 aa18.77■□□□□ 0.6
SLC13A3-205ENST00000417157 DCAF8L1A6NGE4 600 aa18.77■□□□□ 0.6
SLC13A3-205ENST00000417157 BTBD11A6QL63 1104 aa18.77■□□□□ 0.6
SLC13A3-205ENST00000417157 RPS6KA4O75676 772 aa18.77■□□□□ 0.6
SLC13A3-205ENST00000417157 CRKLP46109 303 aaKnown RBP18.77■□□□□ 0.6
SLC13A3-205ENST00000417157 NFE2L2Q16236 605 aa18.77■□□□□ 0.6
SLC13A3-205ENST00000417157 UBR2Q8IWV8 1755 aa18.76■□□□□ 0.59
SLC13A3-205ENST00000417157 MCM10Q7L590 875 aa18.76■□□□□ 0.59
SLC13A3-205ENST00000417157 FMNL2Q96PY5 1086 aa18.76■□□□□ 0.59
SLC13A3-205ENST00000417157 TEX13AQ9BXU3 409 aaPredicted RBP18.76■□□□□ 0.59
SLC13A3-205ENST00000417157 SIPA1L3O60292 1781 aaPredicted RBP18.76■□□□□ 0.59
SLC13A3-205ENST00000417157 MSL1Q68DK7 614 aa18.75■□□□□ 0.59
SLC13A3-205ENST00000417157 AMIGO3Q86WK7 504 aa18.75■□□□□ 0.59
SLC13A3-205ENST00000417157 DNAJC10Q8IXB1 793 aa18.75■□□□□ 0.59
SLC13A3-205ENST00000417157 FHDC1Q9C0D6 1143 aaPredicted RBP18.75■□□□□ 0.59
SLC13A3-205ENST00000417157 CCDC87Q9NVE4 849 aa18.75■□□□□ 0.59
SLC13A3-205ENST00000417157 HEG1Q9ULI3 1381 aa18.74■□□□□ 0.59
SLC13A3-205ENST00000417157 STARD3NLO95772 234 aa18.74■□□□□ 0.59
SLC13A3-205ENST00000417157 RFC4P35249 363 aa18.74■□□□□ 0.59
SLC13A3-205ENST00000417157 LMOD3Q0VAK6 560 aa18.74■□□□□ 0.59
SLC13A3-205ENST00000417157 PNISRQ8TF01 805 aaKnown RBP18.74■□□□□ 0.59
SLC13A3-205ENST00000417157 ANP32CO43423 234 aa18.73■□□□□ 0.59
SLC13A3-205ENST00000417157 ZNF496Q96IT1 587 aaPredicted RBP18.73■□□□□ 0.59
SLC13A3-205ENST00000417157 SYT17Q9BSW7 474 aa18.73■□□□□ 0.59
SLC13A3-205ENST00000417157 CYP19A1P11511 503 aaPredicted RBP18.72■□□□□ 0.59
SLC13A3-205ENST00000417157 DCTN1Q14203 1278 aa18.72■□□□□ 0.59
SLC13A3-205ENST00000417157 TAF7Q15545 349 aaPredicted RBP18.72■□□□□ 0.59
SLC13A3-205ENST00000417157 ARHGEF1Q92888 912 aaKnown RBP18.72■□□□□ 0.59
SLC13A3-205ENST00000417157 KLHL34Q8N239 644 aa18.71■□□□□ 0.59
SLC13A3-205ENST00000417157 NLGN1Q8N2Q7 840 aa18.71■□□□□ 0.59
SLC13A3-205ENST00000417157 RUNDC1Q96C34 613 aa18.71■□□□□ 0.59
SLC13A3-205ENST00000417157 INTS5Q6P9B9 1019 aaKnown RBP18.7■□□□□ 0.58
SLC13A3-205ENST00000417157 SMIM5Q71RC9 77 aa18.7■□□□□ 0.58
SLC13A3-205ENST00000417157 RIPK4P57078 832 aa18.69■□□□□ 0.58
SLC13A3-205ENST00000417157 SOS1Q07889 1333 aaPredicted RBP18.69■□□□□ 0.58
SLC13A3-205ENST00000417157 NPM2Q86SE8 214 aaKnown RBP18.68■□□□□ 0.58
SLC13A3-205ENST00000417157 ADAMTS8Q9UP79 889 aa18.68■□□□□ 0.58
SLC13A3-205ENST00000417157 ZBTB1Q9Y2K1 713 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms