RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 RARSP54136 660 aaKnown RBP13.07□□□□□ -0.32
DEPDC4-203ENST00000416321 TWISTNBQ3B726 338 aaPredicted RBP13.07□□□□□ -0.32
DEPDC4-203ENST00000416321 SMC4Q9NTJ3 1288 aa13.07□□□□□ -0.32
DEPDC4-203ENST00000416321 MIS18AQ9NYP9 233 aa13.07□□□□□ -0.32
DEPDC4-203ENST00000416321 ZBTB12Q9Y330 459 aaPredicted RBP13.07□□□□□ -0.32
DEPDC4-203ENST00000416321 SPATA31A1Q5TZJ5 1347 aa13.07□□□□□ -0.32
DEPDC4-203ENST00000416321 WNK3Q9BYP7 1800 aa13.06□□□□□ -0.32
DEPDC4-203ENST00000416321 LRP6O75581 1613 aa13.06□□□□□ -0.32
DEPDC4-203ENST00000416321 BTBD11A6QL63 1104 aa13.06□□□□□ -0.32
DEPDC4-203ENST00000416321 ERICH6BQ5W0A0 696 aa13.06□□□□□ -0.32
DEPDC4-203ENST00000416321 DDX54Q8TDD1 881 aaKnown RBP13.06□□□□□ -0.32
DEPDC4-203ENST00000416321 USP21Q9UK80 565 aa13.06□□□□□ -0.32
DEPDC4-203ENST00000416321 SCN11AQ9UI33 1791 aa13.06□□□□□ -0.32
DEPDC4-203ENST00000416321 SPATA31A5Q5VU36 1347 aa13.06□□□□□ -0.32
DEPDC4-203ENST00000416321 SPATA31A7Q8IWB4 1347 aa13.06□□□□□ -0.32
DEPDC4-203ENST00000416321 EXOC5O00471 708 aa13.05□□□□□ -0.32
DEPDC4-203ENST00000416321 ELL2O00472 640 aaPredicted RBP13.05□□□□□ -0.32
DEPDC4-203ENST00000416321 CYP27B1O15528 508 aa13.05□□□□□ -0.32
DEPDC4-203ENST00000416321 BCAR3O75815 825 aa13.05□□□□□ -0.32
DEPDC4-203ENST00000416321 ALDH1L2Q3SY69 923 aa13.05□□□□□ -0.32
DEPDC4-203ENST00000416321 FRAT1Q92837 279 aaPredicted RBP13.05□□□□□ -0.32
DEPDC4-203ENST00000416321 DISP2A7MBM2 1401 aa13.05□□□□□ -0.32
DEPDC4-203ENST00000416321 PLIN1O60240 522 aa13.04□□□□□ -0.32
DEPDC4-203ENST00000416321 CABP4P57796 275 aa13.04□□□□□ -0.32
DEPDC4-203ENST00000416321 VPS72Q15906 364 aa13.04□□□□□ -0.32
DEPDC4-203ENST00000416321 FNBP4Q8N3X1 1017 aaPredicted RBP13.04□□□□□ -0.32
DEPDC4-203ENST00000416321 C8orf58Q8NAV2 365 aa13.04□□□□□ -0.32
DEPDC4-203ENST00000416321 BCL2L13Q9BXK5 485 aa13.04□□□□□ -0.32
DEPDC4-203ENST00000416321 CHMP4AQ9BY43 222 aa13.04□□□□□ -0.32
DEPDC4-203ENST00000416321 SLC52A2Q9HAB3 445 aa13.04□□□□□ -0.32
DEPDC4-203ENST00000416321 ADAMTS7Q9UKP4 1686 aa13.04□□□□□ -0.32
DEPDC4-203ENST00000416321 SOS1Q07889 1333 aaPredicted RBP13.04□□□□□ -0.32
DEPDC4-203ENST00000416321 KIF16BQ96L93 1317 aa13.04□□□□□ -0.32
DEPDC4-203ENST00000416321 KDM6AO15550 1401 aaPredicted RBP13.04□□□□□ -0.32
DEPDC4-203ENST00000416321 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.03□□□□□ -0.32
DEPDC4-203ENST00000416321 VAMP4O75379 141 aa13.03□□□□□ -0.32
DEPDC4-203ENST00000416321 MS4A1P11836 297 aa13.03□□□□□ -0.32
DEPDC4-203ENST00000416321 DDB1Q16531 1140 aa13.03□□□□□ -0.32
DEPDC4-203ENST00000416321 TSPYL6Q8N831 410 aa13.03□□□□□ -0.32
DEPDC4-203ENST00000416321 TNS2Q63HR2 1409 aa13.03□□□□□ -0.32
DEPDC4-203ENST00000416321 A0A0G2JS52 829 aa13.02□□□□□ -0.33
DEPDC4-203ENST00000416321 IPO8O15397 1037 aaKnown RBP13.02□□□□□ -0.33
DEPDC4-203ENST00000416321 MYT1Q01538 1121 aa13.02□□□□□ -0.33
DEPDC4-203ENST00000416321 BARGINQ6ZT62 677 aa13.02□□□□□ -0.33
DEPDC4-203ENST00000416321 TTC5Q8N0Z6 440 aa13.02□□□□□ -0.33
DEPDC4-203ENST00000416321 SSH1Q8WYL5 1049 aa13.02□□□□□ -0.33
DEPDC4-203ENST00000416321 BCL9LQ86UU0 1499 aa13.02□□□□□ -0.33
DEPDC4-203ENST00000416321 SHANK3Q9BYB0 1731 aa13.02□□□□□ -0.33
DEPDC4-203ENST00000416321 KDM3BQ7LBC6 1761 aa13.02□□□□□ -0.33
DEPDC4-203ENST00000416321 ERVV-2B6SEH9 535 aa13.01□□□□□ -0.33
DEPDC4-203ENST00000416321 NKX1-1Q15270 411 aaPredicted RBP13.01□□□□□ -0.33
DEPDC4-203ENST00000416321 ZKSCAN2Q63HK3 967 aa13.01□□□□□ -0.33
DEPDC4-203ENST00000416321 STK31Q9BXU1 1019 aa13.01□□□□□ -0.33
DEPDC4-203ENST00000416321 AFF2P51816 1311 aa13.01□□□□□ -0.33
DEPDC4-203ENST00000416321 MRC1P22897 1456 aa13.01□□□□□ -0.33
DEPDC4-203ENST00000416321 SIPA1L3O60292 1781 aaPredicted RBP13.01□□□□□ -0.33
DEPDC4-203ENST00000416321 KRT24Q2M2I5 525 aa13□□□□□ -0.33
DEPDC4-203ENST00000416321 FTSJ3Q8IY81 847 aaKnown RBP13□□□□□ -0.33
DEPDC4-203ENST00000416321 NFATC2IPQ8NCF5 419 aa13□□□□□ -0.33
DEPDC4-203ENST00000416321 HOXB7P09629 217 aa12.99□□□□□ -0.33
DEPDC4-203ENST00000416321 EIF4A1P60842 406 aaKnown RBP12.99□□□□□ -0.33
DEPDC4-203ENST00000416321 PDE3AQ14432 1141 aa12.99□□□□□ -0.33
DEPDC4-203ENST00000416321 FAM98CQ17RN3 349 aaKnown RBP12.99□□□□□ -0.33
DEPDC4-203ENST00000416321 CCDC30Q5VVM6 783 aa12.99□□□□□ -0.33
DEPDC4-203ENST00000416321 TMOD3Q9NYL9 352 aa12.99□□□□□ -0.33
DEPDC4-203ENST00000416321 TRPC5Q9UL62 973 aaPredicted RBP12.99□□□□□ -0.33
DEPDC4-203ENST00000416321 ZNF790Q6PG37 636 aa12.98□□□□□ -0.33
DEPDC4-203ENST00000416321 MRPL50Q8N5N7 158 aaKnown RBP12.98□□□□□ -0.33
DEPDC4-203ENST00000416321 PPP4R2Q9NY27 417 aa12.98□□□□□ -0.33
DEPDC4-203ENST00000416321 TCERG1O14776 1098 aaKnown RBP12.97□□□□□ -0.33
DEPDC4-203ENST00000416321 BRPF1P55201 1214 aaPredicted RBP12.97□□□□□ -0.33
DEPDC4-203ENST00000416321 HDGFL1Q5TGJ6 251 aa12.97□□□□□ -0.33
DEPDC4-203ENST00000416321 CRBNQ96SW2 442 aa12.97□□□□□ -0.33
DEPDC4-203ENST00000416321 NOB1Q9ULX3 412 aaKnown RBP12.97□□□□□ -0.33
DEPDC4-203ENST00000416321 KCNQ3O43525 872 aa12.96□□□□□ -0.33
DEPDC4-203ENST00000416321 SLC39A6Q13433 755 aa12.96□□□□□ -0.33
DEPDC4-203ENST00000416321 ATF7IPQ6VMQ6 1270 aa12.96□□□□□ -0.33
DEPDC4-203ENST00000416321 DZIP1LQ8IYY4 767 aaKnown RBP12.96□□□□□ -0.33
DEPDC4-203ENST00000416321 EXOC6Q8TAG9 804 aa12.96□□□□□ -0.33
DEPDC4-203ENST00000416321 FBXO41Q8TF61 875 aa12.96□□□□□ -0.33
DEPDC4-203ENST00000416321 GJD4Q96KN9 370 aaPredicted RBP12.96□□□□□ -0.33
DEPDC4-203ENST00000416321 FMNL2Q96PY5 1086 aa12.96□□□□□ -0.33
DEPDC4-203ENST00000416321 API5Q9BZZ5 524 aaKnown RBP12.96□□□□□ -0.33
DEPDC4-203ENST00000416321 EIF2S2P20042 333 aaKnown RBP12.95□□□□□ -0.34
DEPDC4-203ENST00000416321 C20orf194Q5TEA3 1177 aa12.95□□□□□ -0.34
DEPDC4-203ENST00000416321 ARHGAP45Q92619 1136 aa12.95□□□□□ -0.34
DEPDC4-203ENST00000416321 CLUAP1Q96AJ1 413 aa12.95□□□□□ -0.34
DEPDC4-203ENST00000416321 SYTL4Q96C24 671 aaPredicted RBP12.95□□□□□ -0.34
DEPDC4-203ENST00000416321 ATRNO75882 1429 aa12.95□□□□□ -0.34
DEPDC4-203ENST00000416321 PTPRCP08575 1304 aa12.94□□□□□ -0.34
DEPDC4-203ENST00000416321 TRIM27P14373 513 aa12.94□□□□□ -0.34
DEPDC4-203ENST00000416321 PANK1Q8TE04 598 aa12.94□□□□□ -0.34
DEPDC4-203ENST00000416321 NECTIN2Q92692 538 aa12.94□□□□□ -0.34
DEPDC4-203ENST00000416321 TOGARAM1Q9Y4F4 1720 aa12.93□□□□□ -0.34
DEPDC4-203ENST00000416321 GIGYF1O75420 1035 aaPredicted RBP12.93□□□□□ -0.34
DEPDC4-203ENST00000416321 SNRPA1P09661 255 aaKnown RBP12.93□□□□□ -0.34
DEPDC4-203ENST00000416321 ZNF772Q68DY9 489 aaPredicted RBP12.93□□□□□ -0.34
DEPDC4-203ENST00000416321 CCDC136Q96JN2 1154 aa12.93□□□□□ -0.34
DEPDC4-203ENST00000416321 QTRT2Q9H974 415 aaKnown RBP12.93□□□□□ -0.34
DEPDC4-203ENST00000416321 COG6Q9Y2V7 657 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 191 ms