RNA–Protein interactions for RNA: ENST00000415022.1

CRAMP1-203, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-203ENST00000415022 CEP350Q5VT06 3117 aa14.08□□□□□ -0.16
CRAMP1-203ENST00000415022 RNMTO43148 476 aaKnown RBP14.08□□□□□ -0.16
CRAMP1-203ENST00000415022 AKAP4Q5JQC9 854 aa14.08□□□□□ -0.16
CRAMP1-203ENST00000415022 ASAP1Q9ULH1 1129 aa14.08□□□□□ -0.16
CRAMP1-203ENST00000415022 NUDCQ9Y266 331 aa14.08□□□□□ -0.16
CRAMP1-203ENST00000415022 CEMIPQ8WUJ3 1361 aa14.08□□□□□ -0.16
CRAMP1-203ENST00000415022 MAP3K5Q99683 1374 aa14.08□□□□□ -0.16
CRAMP1-203ENST00000415022 ANP32CO43423 234 aa14.07□□□□□ -0.16
CRAMP1-203ENST00000415022 DCTN1Q14203 1278 aa14.07□□□□□ -0.16
CRAMP1-203ENST00000415022 DCAF5Q96JK2 942 aa14.07□□□□□ -0.16
CRAMP1-203ENST00000415022 UTRNP46939 3433 aa14.07□□□□□ -0.16
CRAMP1-203ENST00000415022 KCPQ6ZWJ8 1503 aa14.06□□□□□ -0.16
CRAMP1-203ENST00000415022 CICQ96RK0 1608 aaPredicted RBP14.06□□□□□ -0.16
CRAMP1-203ENST00000415022 TXNRD1Q16881 649 aa14.06□□□□□ -0.16
CRAMP1-203ENST00000415022 NFATC2IPQ8NCF5 419 aa14.06□□□□□ -0.16
CRAMP1-203ENST00000415022 ATG3Q9NT62 314 aa14.06□□□□□ -0.16
CRAMP1-203ENST00000415022 ZNF831Q5JPB2 1677 aa14.06□□□□□ -0.16
CRAMP1-203ENST00000415022 KDM3BQ7LBC6 1761 aa14.06□□□□□ -0.16
CRAMP1-203ENST00000415022 CASZ1Q86V15 1759 aa14.06□□□□□ -0.16
CRAMP1-203ENST00000415022 MCM10Q7L590 875 aa14.05□□□□□ -0.16
CRAMP1-203ENST00000415022 THUMPD2Q9BTF0 503 aaKnown RBP14.05□□□□□ -0.16
CRAMP1-203ENST00000415022 UBR3Q6ZT12 1888 aa14.04□□□□□ -0.16
CRAMP1-203ENST00000415022 ERVV-2B6SEH9 535 aa14.04□□□□□ -0.16
CRAMP1-203ENST00000415022 C1orf141Q5JVX7 400 aa14.04□□□□□ -0.16
CRAMP1-203ENST00000415022 AMIGO3Q86WK7 504 aa14.04□□□□□ -0.16
CRAMP1-203ENST00000415022 PDGFDQ9GZP0 370 aaPredicted RBP14.04□□□□□ -0.16
CRAMP1-203ENST00000415022 SLC52A2Q9HAB3 445 aa14.04□□□□□ -0.16
CRAMP1-203ENST00000415022 RRP7AQ9Y3A4 280 aaKnown RBP14.04□□□□□ -0.16
CRAMP1-203ENST00000415022 PALLDQ8WX93 1383 aa14.04□□□□□ -0.16
CRAMP1-203ENST00000415022 GNAT3A8MTJ3 354 aa14.03□□□□□ -0.16
CRAMP1-203ENST00000415022 KCNQ3O43525 872 aa14.03□□□□□ -0.16
CRAMP1-203ENST00000415022 GIGYF1O75420 1035 aaPredicted RBP14.03□□□□□ -0.16
CRAMP1-203ENST00000415022 SLC39A6Q13433 755 aa14.03□□□□□ -0.16
CRAMP1-203ENST00000415022 ITPK1Q13572 414 aa14.03□□□□□ -0.16
CRAMP1-203ENST00000415022 ZNF827Q17R98 1081 aa14.03□□□□□ -0.16
CRAMP1-203ENST00000415022 MRS2Q9HD23 443 aa14.03□□□□□ -0.16
CRAMP1-203ENST00000415022 C4BP0C0L5 1744 aa14.03□□□□□ -0.16
CRAMP1-203ENST00000415022 QSER1Q2KHR3 1735 aa14.03□□□□□ -0.16
CRAMP1-203ENST00000415022 NFE2L2Q16236 605 aa14.02□□□□□ -0.17
CRAMP1-203ENST00000415022 SMIM5Q71RC9 77 aa14.02□□□□□ -0.17
CRAMP1-203ENST00000415022 MIER1Q8N108 512 aa14.02□□□□□ -0.17
CRAMP1-203ENST00000415022 GAS2L2Q8NHY3 880 aa14.02□□□□□ -0.17
CRAMP1-203ENST00000415022 TMOD3Q9NYL9 352 aa14.02□□□□□ -0.17
CRAMP1-203ENST00000415022 TRIM35Q9UPQ4 493 aa14.02□□□□□ -0.17
CRAMP1-203ENST00000415022 HSP90AB1P08238 724 aaKnown RBP14.01□□□□□ -0.17
CRAMP1-203ENST00000415022 TMPOP42166 694 aaKnown RBP14.01□□□□□ -0.17
CRAMP1-203ENST00000415022 DIEXFQ68CQ4 756 aaKnown RBP14.01□□□□□ -0.17
CRAMP1-203ENST00000415022 CABP4P57796 275 aa14□□□□□ -0.17
CRAMP1-203ENST00000415022 AKT1S1Q96B36 256 aa14□□□□□ -0.17
CRAMP1-203ENST00000415022 RUNDC1Q96C34 613 aa14□□□□□ -0.17
CRAMP1-203ENST00000415022 WDR43Q15061 677 aaKnown RBP eCLIP13.99□□□□□ -0.17
CRAMP1-203ENST00000415022 LINC00116Q8NCU8 138 aa13.99□□□□□ -0.17
CRAMP1-203ENST00000415022 APAF1O14727 1248 aa13.98□□□□□ -0.17
CRAMP1-203ENST00000415022 SYT17Q9BSW7 474 aa13.98□□□□□ -0.17
CRAMP1-203ENST00000415022 MIS18AQ9NYP9 233 aa13.98□□□□□ -0.17
CRAMP1-203ENST00000415022 COL24A1Q17RW2 1714 aa13.98□□□□□ -0.17
CRAMP1-203ENST00000415022 LOC102724428A0A0B4J2F2 783 aa13.97□□□□□ -0.17
CRAMP1-203ENST00000415022 SIK1P57059 783 aa13.97□□□□□ -0.17
CRAMP1-203ENST00000415022 RIPK4P57078 832 aa13.97□□□□□ -0.17
CRAMP1-203ENST00000415022 CCNL1Q9UK58 526 aaPredicted RBP13.97□□□□□ -0.17
CRAMP1-203ENST00000415022 C4AP0C0L4 1744 aa13.97□□□□□ -0.17
CRAMP1-203ENST00000415022 PRAMEF22A3QJZ6 481 aa13.96□□□□□ -0.17
CRAMP1-203ENST00000415022 PTCD1O75127 700 aaKnown RBP13.96□□□□□ -0.17
CRAMP1-203ENST00000415022 PTGER2P43116 358 aa13.96□□□□□ -0.17
CRAMP1-203ENST00000415022 NEUROD2Q15784 382 aa13.96□□□□□ -0.17
CRAMP1-203ENST00000415022 ZNF496Q96IT1 587 aaPredicted RBP13.96□□□□□ -0.17
CRAMP1-203ENST00000415022 HTATSF1O43719 755 aaKnown RBP13.95□□□□□ -0.18
CRAMP1-203ENST00000415022 MAPK8IP3Q9UPT6 1336 aa13.94□□□□□ -0.18
CRAMP1-203ENST00000415022 SLC15A2Q16348 729 aa13.94□□□□□ -0.18
CRAMP1-203ENST00000415022 SLC27A3Q5K4L6 730 aa13.94□□□□□ -0.18
CRAMP1-203ENST00000415022 FAM9BQ8IZU0 186 aa13.94□□□□□ -0.18
CRAMP1-203ENST00000415022 SMARCC1Q92922 1105 aaPredicted RBP13.94□□□□□ -0.18
CRAMP1-203ENST00000415022 FHDC1Q9C0D6 1143 aaPredicted RBP13.94□□□□□ -0.18
CRAMP1-203ENST00000415022 LAMB4A4D0S4 1761 aa13.94□□□□□ -0.18
CRAMP1-203ENST00000415022 PNPLA7Q6ZV29 1317 aa13.93□□□□□ -0.18
CRAMP1-203ENST00000415022 ATP6V1AP38606 617 aa13.93□□□□□ -0.18
CRAMP1-203ENST00000415022 ZNF790Q6PG37 636 aa13.93□□□□□ -0.18
CRAMP1-203ENST00000415022 DNAJC10Q8IXB1 793 aa13.93□□□□□ -0.18
CRAMP1-203ENST00000415022 RBM42Q9BTD8 480 aaKnown RBP13.93□□□□□ -0.18
CRAMP1-203ENST00000415022 CHD4Q14839 1912 aa13.93□□□□□ -0.18
CRAMP1-203ENST00000415022 HEG1Q9ULI3 1381 aa13.93□□□□□ -0.18
CRAMP1-203ENST00000415022 BTBD11A6QL63 1104 aa13.91□□□□□ -0.18
CRAMP1-203ENST00000415022 CCER2I3L3R5 266 aa13.91□□□□□ -0.18
CRAMP1-203ENST00000415022 TEFQ10587 303 aa13.91□□□□□ -0.18
CRAMP1-203ENST00000415022 KRT24Q2M2I5 525 aa13.91□□□□□ -0.18
CRAMP1-203ENST00000415022 ZBTB7AO95365 584 aa13.9□□□□□ -0.18
CRAMP1-203ENST00000415022 ZNF853P0CG23 659 aa13.9□□□□□ -0.18
CRAMP1-203ENST00000415022 TAF7Q15545 349 aaPredicted RBP13.9□□□□□ -0.18
CRAMP1-203ENST00000415022 INTS5Q6P9B9 1019 aaKnown RBP13.9□□□□□ -0.18
CRAMP1-203ENST00000415022 RTF1Q92541 710 aaKnown RBP13.9□□□□□ -0.18
CRAMP1-203ENST00000415022 PNNQ9H307 717 aaKnown RBP13.9□□□□□ -0.18
CRAMP1-203ENST00000415022 SPINK5Q9NQ38 1064 aaPredicted RBP13.9□□□□□ -0.18
CRAMP1-203ENST00000415022 CYP19A1P11511 503 aaPredicted RBP13.89□□□□□ -0.19
CRAMP1-203ENST00000415022 COL23A1Q86Y22 540 aaPredicted RBP13.89□□□□□ -0.19
CRAMP1-203ENST00000415022 ATF5Q9Y2D1 282 aaPredicted RBP13.89□□□□□ -0.19
CRAMP1-203ENST00000415022 CHL1O00533 1208 aa13.88□□□□□ -0.19
CRAMP1-203ENST00000415022 EIF4A1P60842 406 aaKnown RBP13.88□□□□□ -0.19
CRAMP1-203ENST00000415022 STK32BQ9NY57 414 aa13.88□□□□□ -0.19
CRAMP1-203ENST00000415022 USP16Q9Y5T5 823 aa13.88□□□□□ -0.19
CRAMP1-203ENST00000415022 ZNF521Q96K83 1311 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms