RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 SLC52A2Q9HAB3 445 aa17.14■□□□□ 0.33
CNOT4-204ENST00000414802 MIS18AQ9NYP9 233 aa17.13■□□□□ 0.33
CNOT4-204ENST00000414802 C5P01031 1676 aa17.13■□□□□ 0.33
CNOT4-204ENST00000414802 PRIM1P49642 420 aaKnown RBP17.13■□□□□ 0.33
CNOT4-204ENST00000414802 CABP4P57796 275 aa17.13■□□□□ 0.33
CNOT4-204ENST00000414802 WDR63Q8IWG1 891 aa17.13■□□□□ 0.33
CNOT4-204ENST00000414802 NFATC2IPQ8NCF5 419 aa17.13■□□□□ 0.33
CNOT4-204ENST00000414802 BCL9O00512 1426 aa17.12■□□□□ 0.33
CNOT4-204ENST00000414802 ERVV-2B6SEH9 535 aa17.12■□□□□ 0.33
CNOT4-204ENST00000414802 KCNQ2O43526 872 aa17.12■□□□□ 0.33
CNOT4-204ENST00000414802 GOLGA2Q08379 1002 aa17.12■□□□□ 0.33
CNOT4-204ENST00000414802 PTF1AQ7RTS3 328 aa17.12■□□□□ 0.33
CNOT4-204ENST00000414802 TSR2Q969E8 191 aaKnown RBP17.11■□□□□ 0.33
CNOT4-204ENST00000414802 TMOD3Q9NYL9 352 aa17.11■□□□□ 0.33
CNOT4-204ENST00000414802 CALD1Q05682 793 aaKnown RBP17.1■□□□□ 0.33
CNOT4-204ENST00000414802 PIGBQ92521 554 aa17.1■□□□□ 0.33
CNOT4-204ENST00000414802 IL16Q14005 1332 aa17.1■□□□□ 0.33
CNOT4-204ENST00000414802 SLC39A6Q13433 755 aa17.1■□□□□ 0.33
CNOT4-204ENST00000414802 TAF7Q15545 349 aaPredicted RBP17.1■□□□□ 0.33
CNOT4-204ENST00000414802 IFT57Q9NWB7 429 aa17.1■□□□□ 0.33
CNOT4-204ENST00000414802 TSPYL4Q9UJ04 414 aa17.1■□□□□ 0.33
CNOT4-204ENST00000414802 LY75O60449 1722 aa17.09■□□□□ 0.33
CNOT4-204ENST00000414802 BTBD11A6QL63 1104 aa17.09■□□□□ 0.33
CNOT4-204ENST00000414802 KCNQ3O43525 872 aa17.09■□□□□ 0.33
CNOT4-204ENST00000414802 ZNF853P0CG23 659 aa17.09■□□□□ 0.33
CNOT4-204ENST00000414802 GNAI1P63096 354 aa17.09■□□□□ 0.33
CNOT4-204ENST00000414802 FAM196AQ6ZSG2 479 aa17.09■□□□□ 0.33
CNOT4-204ENST00000414802 MBIPQ9NS73 344 aa17.09■□□□□ 0.33
CNOT4-204ENST00000414802 FANCIQ9NVI1 1328 aa17.09■□□□□ 0.33
CNOT4-204ENST00000414802 LAMB4A4D0S4 1761 aa17.09■□□□□ 0.33
CNOT4-204ENST00000414802 SLFN5Q08AF3 891 aa17.08■□□□□ 0.32
CNOT4-204ENST00000414802 KCPQ6ZWJ8 1503 aa17.08■□□□□ 0.32
CNOT4-204ENST00000414802 CFAP44Q96MT7 982 aa17.08■□□□□ 0.32
CNOT4-204ENST00000414802 TJP1Q07157 1748 aa17.07■□□□□ 0.32
CNOT4-204ENST00000414802 E9PSI1 815 aa17.07■□□□□ 0.32
CNOT4-204ENST00000414802 CHL1O00533 1208 aa17.07■□□□□ 0.32
CNOT4-204ENST00000414802 TRIM37O94972 964 aa17.07■□□□□ 0.32
CNOT4-204ENST00000414802 TAF1LQ8IZX4 1826 aa17.06■□□□□ 0.32
CNOT4-204ENST00000414802 ASAP1Q9ULH1 1129 aa17.06■□□□□ 0.32
CNOT4-204ENST00000414802 MYH16Q9H6N6 1097 aa17.05■□□□□ 0.32
CNOT4-204ENST00000414802 KRT24Q2M2I5 525 aa17.04■□□□□ 0.32
CNOT4-204ENST00000414802 DUSP27Q5VZP5 1158 aa17.04■□□□□ 0.32
CNOT4-204ENST00000414802 ZNF790Q6PG37 636 aa17.04■□□□□ 0.32
CNOT4-204ENST00000414802 ATG3Q9NT62 314 aa17.04■□□□□ 0.32
CNOT4-204ENST00000414802 COL5A3P25940 1745 aaPredicted RBP17.03■□□□□ 0.32
CNOT4-204ENST00000414802 TRMT2AQ8IZ69 625 aaKnown RBP17.03■□□□□ 0.32
CNOT4-204ENST00000414802 TTC5Q8N0Z6 440 aa17.03■□□□□ 0.32
CNOT4-204ENST00000414802 RGPD3A6NKT7 1758 aaPredicted RBP17.03■□□□□ 0.32
CNOT4-204ENST00000414802 RGPD4Q7Z3J3 1758 aa17.03■□□□□ 0.32
CNOT4-204ENST00000414802 PALLDQ8WX93 1383 aa17.02■□□□□ 0.32
CNOT4-204ENST00000414802 BCL11BQ9C0K0 894 aaPredicted RBP17.02■□□□□ 0.32
CNOT4-204ENST00000414802 BABAM1Q9NWV8 329 aa17.02■□□□□ 0.32
CNOT4-204ENST00000414802 CICQ96RK0 1608 aaPredicted RBP17.02■□□□□ 0.31
CNOT4-204ENST00000414802 PTCD1O75127 700 aaKnown RBP17.01■□□□□ 0.31
CNOT4-204ENST00000414802 EXOSC9Q06265 439 aaKnown RBP17.01■□□□□ 0.31
CNOT4-204ENST00000414802 ZNF496Q96IT1 587 aaPredicted RBP17.01■□□□□ 0.31
CNOT4-204ENST00000414802 CACNA1FO60840 1977 aa17.01■□□□□ 0.31
CNOT4-204ENST00000414802 ZNF831Q5JPB2 1677 aa17.01■□□□□ 0.31
CNOT4-204ENST00000414802 EIF4A1P60842 406 aaKnown RBP17.01■□□□□ 0.31
CNOT4-204ENST00000414802 MYH14Q7Z406 1995 aaKnown RBP17■□□□□ 0.31
CNOT4-204ENST00000414802 ELL2O00472 640 aaPredicted RBP17■□□□□ 0.31
CNOT4-204ENST00000414802 TSPYL6Q8N831 410 aa17■□□□□ 0.31
CNOT4-204ENST00000414802 C8orf58Q8NAV2 365 aa17■□□□□ 0.31
CNOT4-204ENST00000414802 RBM42Q9BTD8 480 aaKnown RBP17■□□□□ 0.31
CNOT4-204ENST00000414802 PRAMEF22A3QJZ6 481 aa16.99■□□□□ 0.31
CNOT4-204ENST00000414802 HEG1Q9ULI3 1381 aa16.98■□□□□ 0.31
CNOT4-204ENST00000414802 ILDR2Q71H61 639 aa16.97■□□□□ 0.31
CNOT4-204ENST00000414802 FMNL2Q96PY5 1086 aa16.97■□□□□ 0.31
CNOT4-204ENST00000414802 SLC4A9Q96Q91 983 aa16.97■□□□□ 0.31
CNOT4-204ENST00000414802 RREB1Q92766 1687 aa16.97■□□□□ 0.31
CNOT4-204ENST00000414802 SMARCC1Q92922 1105 aaPredicted RBP16.97■□□□□ 0.31
CNOT4-204ENST00000414802 APBA3O96018 575 aa16.96■□□□□ 0.31
CNOT4-204ENST00000414802 KCNQ4P56696 695 aa16.96■□□□□ 0.31
CNOT4-204ENST00000414802 TUBGCP6Q96RT7 1819 aa16.95■□□□□ 0.3
CNOT4-204ENST00000414802 TWISTNBQ3B726 338 aaPredicted RBP16.95■□□□□ 0.3
CNOT4-204ENST00000414802 NUP188Q5SRE5 1749 aa16.95■□□□□ 0.3
CNOT4-204ENST00000414802 LOC102724428A0A0B4J2F2 783 aa16.94■□□□□ 0.3
CNOT4-204ENST00000414802 MSH5O43196 834 aa16.94■□□□□ 0.3
CNOT4-204ENST00000414802 GIGYF1O75420 1035 aaPredicted RBP16.94■□□□□ 0.3
CNOT4-204ENST00000414802 SIK1P57059 783 aa16.94■□□□□ 0.3
CNOT4-204ENST00000414802 NECTIN2Q92692 538 aa16.94■□□□□ 0.3
CNOT4-204ENST00000414802 DNAJC10Q8IXB1 793 aa16.94■□□□□ 0.3
CNOT4-204ENST00000414802 C4BP0C0L5 1744 aa16.93■□□□□ 0.3
CNOT4-204ENST00000414802 TCERG1O14776 1098 aaKnown RBP16.93■□□□□ 0.3
CNOT4-204ENST00000414802 SNRPA1P09661 255 aaKnown RBP16.93■□□□□ 0.3
CNOT4-204ENST00000414802 ATP6V1AP38606 617 aa16.93■□□□□ 0.3
CNOT4-204ENST00000414802 EIF2S2P20042 333 aaKnown RBP16.92■□□□□ 0.3
CNOT4-204ENST00000414802 ITPK1Q13572 414 aa16.92■□□□□ 0.3
CNOT4-204ENST00000414802 CCNL1Q9UK58 526 aaPredicted RBP16.92■□□□□ 0.3
CNOT4-204ENST00000414802 UBR3Q6ZT12 1888 aa16.92■□□□□ 0.3
CNOT4-204ENST00000414802 VAMP4O75379 141 aa16.91■□□□□ 0.3
CNOT4-204ENST00000414802 USP16Q9Y5T5 823 aa16.91■□□□□ 0.3
CNOT4-204ENST00000414802 SF3B2Q13435 895 aaKnown RBP16.91■□□□□ 0.3
CNOT4-204ENST00000414802 HDGFL1Q5TGJ6 251 aa16.91■□□□□ 0.3
CNOT4-204ENST00000414802 PIP4K2AP48426 406 aaPredicted RBP16.9■□□□□ 0.3
CNOT4-204ENST00000414802 EN1Q05925 392 aaPredicted RBP16.9■□□□□ 0.3
CNOT4-204ENST00000414802 DEFB132Q7Z7B7 95 aa16.9■□□□□ 0.3
CNOT4-204ENST00000414802 VSIG10Q8N0Z9 540 aa16.9■□□□□ 0.3
CNOT4-204ENST00000414802 BCL2L13Q9BXK5 485 aa16.9■□□□□ 0.3
CNOT4-204ENST00000414802 HOXB7P09629 217 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms