RNA–Protein interactions for RNA: ENST00000413539.6

DYSF-210, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-210ENST00000413539 SFPQP23246 707 aaKnown RBP eCLIP17.51■□□□□ 0.39
DYSF-210ENST00000413539 GTF2F1P35269 517 aaKnown RBP eCLIP17.51■□□□□ 0.39
DYSF-210ENST00000413539 LUZP1Q86V48 1076 aa17.51■□□□□ 0.39
DYSF-210ENST00000413539 PSMD1Q99460 953 aa17.51■□□□□ 0.39
DYSF-210ENST00000413539 CABP1Q9NZU7 370 aa17.51■□□□□ 0.39
DYSF-210ENST00000413539 PPM1FP49593 454 aaPredicted RBP17.51■□□□□ 0.39
DYSF-210ENST00000413539 TOP2AP11388 1531 aaKnown RBP17.5■□□□□ 0.39
DYSF-210ENST00000413539 GSTTP1A0A1W2PQM5 241 aa17.5■□□□□ 0.39
DYSF-210ENST00000413539 NUP88Q99567 741 aaPredicted RBP17.5■□□□□ 0.39
DYSF-210ENST00000413539 MYOM3Q5VTT5 1437 aa17.5■□□□□ 0.39
DYSF-210ENST00000413539 DESP17661 470 aa17.5■□□□□ 0.39
DYSF-210ENST00000413539 AIDAQ96BJ3 306 aa17.5■□□□□ 0.39
DYSF-210ENST00000413539 CEP63Q96MT8 703 aa17.5■□□□□ 0.39
DYSF-210ENST00000413539 TOP1P11387 765 aaKnown RBP17.5■□□□□ 0.39
DYSF-210ENST00000413539 LIG1P18858 919 aa17.5■□□□□ 0.39
DYSF-210ENST00000413539 TTC16Q8NEE8 873 aa17.5■□□□□ 0.39
DYSF-210ENST00000413539 CEP131Q9UPN4 1083 aa17.5■□□□□ 0.39
DYSF-210ENST00000413539 TRMT1LQ7Z2T5 733 aaKnown RBP17.49■□□□□ 0.39
DYSF-210ENST00000413539 FAM69CQ0P6D2 419 aa17.49■□□□□ 0.39
DYSF-210ENST00000413539 GDPD2Q9HCC8 539 aa17.49■□□□□ 0.39
DYSF-210ENST00000413539 USP25Q9UHP3 1055 aa17.49■□□□□ 0.39
DYSF-210ENST00000413539 BOLA2Q9H3K6 86 aa17.48■□□□□ 0.39
DYSF-210ENST00000413539 PPFIA3O75145 1194 aa17.48■□□□□ 0.39
DYSF-210ENST00000413539 SSFA2P28290 1259 aa17.48■□□□□ 0.39
DYSF-210ENST00000413539 KIF18AQ8NI77 898 aa17.48■□□□□ 0.39
DYSF-210ENST00000413539 FGD6Q6ZV73 1430 aa17.48■□□□□ 0.39
DYSF-210ENST00000413539 PPP4R3BQ5MIZ7 849 aa17.48■□□□□ 0.39
DYSF-210ENST00000413539 CCDC183Q5T5S1 534 aa17.48■□□□□ 0.39
DYSF-210ENST00000413539 BIN1O00499 593 aa17.48■□□□□ 0.39
DYSF-210ENST00000413539 CTNNA3Q9UI47 895 aa17.48■□□□□ 0.39
DYSF-210ENST00000413539 WASF1Q92558 559 aa17.47■□□□□ 0.39
DYSF-210ENST00000413539 FKBP15Q5T1M5 1219 aa17.47■□□□□ 0.39
DYSF-210ENST00000413539 PUS7Q96PZ0 661 aaKnown RBP17.47■□□□□ 0.39
DYSF-210ENST00000413539 CCDC144CPQ8IYA2 1237 aa17.47■□□□□ 0.39
DYSF-210ENST00000413539 ZSCAN12O43309 604 aa17.47■□□□□ 0.39
DYSF-210ENST00000413539 SLC4A8Q2Y0W8 1093 aa17.47■□□□□ 0.39
DYSF-210ENST00000413539 CEP126Q9P2H0 1117 aa17.47■□□□□ 0.39
DYSF-210ENST00000413539 ARHGAP5Q13017 1502 aa17.46■□□□□ 0.39
DYSF-210ENST00000413539 TDRD12Q587J7 1177 aaKnown RBP17.46■□□□□ 0.39
DYSF-210ENST00000413539 CCT2P78371 535 aaKnown RBP17.46■□□□□ 0.39
DYSF-210ENST00000413539 THUMPD2Q9BTF0 503 aaKnown RBP17.46■□□□□ 0.39
DYSF-210ENST00000413539 RBM27Q9P2N5 1060 aaKnown RBP17.46■□□□□ 0.39
DYSF-210ENST00000413539 MAP9Q49MG5 647 aa17.46■□□□□ 0.39
DYSF-210ENST00000413539 SCLT1Q96NL6 688 aa17.46■□□□□ 0.39
DYSF-210ENST00000413539 SEC63Q9UGP8 760 aaKnown RBP17.46■□□□□ 0.39
DYSF-210ENST00000413539 POTEJP0CG39 1038 aa17.46■□□□□ 0.39
DYSF-210ENST00000413539 TSG101Q99816 390 aa17.46■□□□□ 0.39
DYSF-210ENST00000413539 GBP3Q9H0R5 595 aa17.46■□□□□ 0.39
DYSF-210ENST00000413539 ZSWIM4Q9H7M6 989 aa17.46■□□□□ 0.39
DYSF-210ENST00000413539 ATP2C2O75185 946 aa17.45■□□□□ 0.38
DYSF-210ENST00000413539 SPTY2D1Q68D10 685 aaPredicted RBP17.45■□□□□ 0.38
DYSF-210ENST00000413539 ANO10Q9NW15 660 aa17.45■□□□□ 0.38
DYSF-210ENST00000413539 KRT32Q14532 448 aa17.45■□□□□ 0.38
DYSF-210ENST00000413539 METTL24Q5JXM2 366 aa17.45■□□□□ 0.38
DYSF-210ENST00000413539 TMC6Q7Z403 805 aa17.45■□□□□ 0.38
DYSF-210ENST00000413539 AEBP2Q6ZN18 517 aaPredicted RBP17.45■□□□□ 0.38
DYSF-210ENST00000413539 PRKCSHP14314 528 aaPredicted RBP17.45■□□□□ 0.38
DYSF-210ENST00000413539 HLTFQ14527 1009 aaKnown RBP eCLIP17.45■□□□□ 0.38
DYSF-210ENST00000413539 LARP1Q6PKG0 1096 aaKnown RBP17.45■□□□□ 0.38
DYSF-210ENST00000413539 CUX1P39880 1505 aa17.44■□□□□ 0.38
DYSF-210ENST00000413539 FAM107BQ9H098 131 aa17.44■□□□□ 0.38
DYSF-210ENST00000413539 SPG7Q9UQ90 795 aa17.44■□□□□ 0.38
DYSF-210ENST00000413539 RRBP1Q9P2E9 1410 aaKnown RBP17.44■□□□□ 0.38
DYSF-210ENST00000413539 POLR3DP05423 398 aaPredicted RBP17.44■□□□□ 0.38
DYSF-210ENST00000413539 PRPF4BQ13523 1007 aaKnown RBP17.44■□□□□ 0.38
DYSF-210ENST00000413539 ANKRD50Q9ULJ7 1429 aa17.44■□□□□ 0.38
DYSF-210ENST00000413539 WDR63Q8IWG1 891 aa17.44■□□□□ 0.38
DYSF-210ENST00000413539 FYCO1Q9BQS8 1478 aa17.44■□□□□ 0.38
DYSF-210ENST00000413539 PPP1R12BO60237 982 aaPredicted RBP17.44■□□□□ 0.38
DYSF-210ENST00000413539 PROSER2Q86WR7 435 aaPredicted RBP17.43■□□□□ 0.38
DYSF-210ENST00000413539 CTR9Q6PD62 1173 aa17.43■□□□□ 0.38
DYSF-210ENST00000413539 RAB11FIP4Q86YS3 637 aa17.43■□□□□ 0.38
DYSF-210ENST00000413539 TMCO5BA8MYB1 307 aa17.43■□□□□ 0.38
DYSF-210ENST00000413539 CIZ1Q9ULV3 898 aaPredicted RBP17.43■□□□□ 0.38
DYSF-210ENST00000413539 MCM10Q7L590 875 aa17.43■□□□□ 0.38
DYSF-210ENST00000413539 SPECC1Q5M775 1068 aa17.42■□□□□ 0.38
DYSF-210ENST00000413539 PANK2Q9BZ23 570 aa17.42■□□□□ 0.38
DYSF-210ENST00000413539 STAMBPO95630 424 aa17.42■□□□□ 0.38
DYSF-210ENST00000413539 MYCNP04198 464 aaPredicted RBP17.42■□□□□ 0.38
DYSF-210ENST00000413539 C8orf76Q96K31 380 aa17.42■□□□□ 0.38
DYSF-210ENST00000413539 IGHMBP2P38935 993 aaKnown RBP17.42■□□□□ 0.38
DYSF-210ENST00000413539 MAATS1Q7Z4T9 603 aa17.42■□□□□ 0.38
DYSF-210ENST00000413539 CNNM3Q8NE01 707 aa17.42■□□□□ 0.38
DYSF-210ENST00000413539 CCDC8Q9H0W5 538 aaPredicted RBP17.42■□□□□ 0.38
DYSF-210ENST00000413539 MKNK2Q9HBH9 465 aa17.42■□□□□ 0.38
DYSF-210ENST00000413539 TFIP11Q9UBB9 837 aaKnown RBP17.42■□□□□ 0.38
DYSF-210ENST00000413539 GCOM1H8Y6P7 765 aaPredicted RBP17.42■□□□□ 0.38
DYSF-210ENST00000413539 MYZAPP0CAP1 466 aa17.42■□□□□ 0.38
DYSF-210ENST00000413539 CETN2P41208 172 aa17.42■□□□□ 0.38
DYSF-210ENST00000413539 LMAN1P49257 510 aa17.42■□□□□ 0.38
DYSF-210ENST00000413539 C20orf194Q5TEA3 1177 aa17.42■□□□□ 0.38
DYSF-210ENST00000413539 RANBP6O60518 1105 aaKnown RBP17.41■□□□□ 0.38
DYSF-210ENST00000413539 MMRN2Q9H8L6 949 aa17.41■□□□□ 0.38
DYSF-210ENST00000413539 MX1P20591 662 aa17.41■□□□□ 0.38
DYSF-210ENST00000413539 MYD88Q99836 296 aa17.41■□□□□ 0.38
DYSF-210ENST00000413539 ADCY5O95622 1261 aa17.4■□□□□ 0.38
DYSF-210ENST00000413539 PNISRQ8TF01 805 aaKnown RBP17.4■□□□□ 0.38
DYSF-210ENST00000413539 ZNF830Q96NB3 372 aaPredicted RBP17.4■□□□□ 0.38
DYSF-210ENST00000413539 TERF1P54274 439 aa17.4■□□□□ 0.38
DYSF-210ENST00000413539 TNPO1Q92973 898 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms