RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 CHAMP1Q96JM3 812 aa16.42■□□□□ 0.22
CLTCL1-201ENST00000412649 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.42■□□□□ 0.22
CLTCL1-201ENST00000412649 V9GYY5 206 aaPredicted RBP16.42■□□□□ 0.22
CLTCL1-201ENST00000412649 PRDM15P57071 1507 aaPredicted RBP16.42■□□□□ 0.22
CLTCL1-201ENST00000412649 VGLL3A8MV65 326 aa16.42■□□□□ 0.22
CLTCL1-201ENST00000412649 VAMP4O75379 141 aa16.42■□□□□ 0.22
CLTCL1-201ENST00000412649 GJB2P29033 226 aa16.42■□□□□ 0.22
CLTCL1-201ENST00000412649 CLASRPQ8N2M8 674 aaKnown RBP16.42■□□□□ 0.22
CLTCL1-201ENST00000412649 CLASP1Q7Z460 1538 aa16.42■□□□□ 0.22
CLTCL1-201ENST00000412649 F13A1P00488 732 aa16.42■□□□□ 0.22
CLTCL1-201ENST00000412649 SYNMO15061 1565 aa16.42■□□□□ 0.22
CLTCL1-201ENST00000412649 GRIN2AQ12879 1464 aa16.41■□□□□ 0.22
CLTCL1-201ENST00000412649 ZNF608Q9ULD9 1512 aaPredicted RBP16.41■□□□□ 0.22
CLTCL1-201ENST00000412649 GSPT1P15170 499 aaKnown RBP16.41■□□□□ 0.22
CLTCL1-201ENST00000412649 CABP1Q9NZU7 370 aa16.41■□□□□ 0.22
CLTCL1-201ENST00000412649 ANO6Q4KMQ2 910 aa16.41■□□□□ 0.22
CLTCL1-201ENST00000412649 PLCD3Q8N3E9 789 aa16.41■□□□□ 0.22
CLTCL1-201ENST00000412649 CFAP45Q9UL16 551 aa16.41■□□□□ 0.22
CLTCL1-201ENST00000412649 TPM1P09493 284 aa16.4■□□□□ 0.22
CLTCL1-201ENST00000412649 STK3Q13188 491 aa16.4■□□□□ 0.22
CLTCL1-201ENST00000412649 PLPPR3Q6T4P5 718 aa16.4■□□□□ 0.22
CLTCL1-201ENST00000412649 TRIM35Q9UPQ4 493 aa16.4■□□□□ 0.22
CLTCL1-201ENST00000412649 ANKRD36BQ8N2N9 1353 aa16.4■□□□□ 0.22
CLTCL1-201ENST00000412649 CCDC30Q5VVM6 783 aa16.4■□□□□ 0.22
CLTCL1-201ENST00000412649 PRAM1Q96QH2 718 aa16.4■□□□□ 0.22
CLTCL1-201ENST00000412649 SFPQP23246 707 aaKnown RBP eCLIP16.4■□□□□ 0.22
CLTCL1-201ENST00000412649 DCTN1Q14203 1278 aa16.4■□□□□ 0.22
CLTCL1-201ENST00000412649 CAVIN2O95810 425 aa16.39■□□□□ 0.22
CLTCL1-201ENST00000412649 DNM1Q05193 864 aaKnown RBP16.39■□□□□ 0.22
CLTCL1-201ENST00000412649 NUTM1Q86Y26 1132 aa16.39■□□□□ 0.22
CLTCL1-201ENST00000412649 OTUD7AQ8TE49 926 aaPredicted RBP16.39■□□□□ 0.22
CLTCL1-201ENST00000412649 SLU7O95391 586 aaKnown RBP16.39■□□□□ 0.21
CLTCL1-201ENST00000412649 TYRO3Q06418 890 aa16.39■□□□□ 0.21
CLTCL1-201ENST00000412649 C9orf78Q9NZ63 289 aaPredicted RBP16.39■□□□□ 0.21
CLTCL1-201ENST00000412649 AMPHP49418 695 aa16.39■□□□□ 0.21
CLTCL1-201ENST00000412649 BLOC1S2Q6QNY1 142 aa16.39■□□□□ 0.21
CLTCL1-201ENST00000412649 TSPYL6Q8N831 410 aa16.39■□□□□ 0.21
CLTCL1-201ENST00000412649 CCDC34Q96HJ3 373 aa16.39■□□□□ 0.21
CLTCL1-201ENST00000412649 SKILP12757 684 aa16.39■□□□□ 0.21
CLTCL1-201ENST00000412649 SNW1Q13573 536 aaKnown RBP16.39■□□□□ 0.21
CLTCL1-201ENST00000412649 PRDM4Q9UKN5 801 aa16.39■□□□□ 0.21
CLTCL1-201ENST00000412649 PTPRCP08575 1304 aa16.38■□□□□ 0.21
CLTCL1-201ENST00000412649 EIF2S2P20042 333 aaKnown RBP16.38■□□□□ 0.21
CLTCL1-201ENST00000412649 ZNF396Q96N95 335 aaPredicted RBP16.38■□□□□ 0.21
CLTCL1-201ENST00000412649 MEIS3Q99687 375 aa16.38■□□□□ 0.21
CLTCL1-201ENST00000412649 MRC2Q9UBG0 1479 aa16.38■□□□□ 0.21
CLTCL1-201ENST00000412649 HIP1O00291 1037 aa16.38■□□□□ 0.21
CLTCL1-201ENST00000412649 GSDMDP57764 484 aa16.38■□□□□ 0.21
CLTCL1-201ENST00000412649 SULT6B1Q6IMI4 303 aa16.38■□□□□ 0.21
CLTCL1-201ENST00000412649 PDILTQ8N807 584 aa16.38■□□□□ 0.21
CLTCL1-201ENST00000412649 RPGRIP1LQ68CZ1 1315 aa16.37■□□□□ 0.21
CLTCL1-201ENST00000412649 APPP05067 770 aa16.37■□□□□ 0.21
CLTCL1-201ENST00000412649 ME1P48163 572 aa16.37■□□□□ 0.21
CLTCL1-201ENST00000412649 CEP85Q6P2H3 762 aa16.37■□□□□ 0.21
CLTCL1-201ENST00000412649 FAM177A1Q8N128 213 aaPredicted RBP16.37■□□□□ 0.21
CLTCL1-201ENST00000412649 TXLNBQ8N3L3 684 aa16.37■□□□□ 0.21
CLTCL1-201ENST00000412649 DUOX2Q9NRD8 1548 aa16.37■□□□□ 0.21
CLTCL1-201ENST00000412649 ANO10Q9NW15 660 aa16.37■□□□□ 0.21
CLTCL1-201ENST00000412649 TFIP11Q9UBB9 837 aaKnown RBP16.37■□□□□ 0.21
CLTCL1-201ENST00000412649 PRPF40BQ6NWY9 871 aaKnown RBP16.37■□□□□ 0.21
CLTCL1-201ENST00000412649 LUZP1Q86V48 1076 aa16.37■□□□□ 0.21
CLTCL1-201ENST00000412649 FSD1Q9BTV5 496 aa16.36■□□□□ 0.21
CLTCL1-201ENST00000412649 URI1O94763 535 aaPredicted RBP16.36■□□□□ 0.21
CLTCL1-201ENST00000412649 DDIT3P35638 169 aa16.36■□□□□ 0.21
CLTCL1-201ENST00000412649 C8orf58Q8NAV2 365 aa16.36■□□□□ 0.21
CLTCL1-201ENST00000412649 CDK19Q9BWU1 502 aa16.36■□□□□ 0.21
CLTCL1-201ENST00000412649 ATP10BO94823 1461 aa16.36■□□□□ 0.21
CLTCL1-201ENST00000412649 TRPM1Q7Z4N2 1603 aa16.36■□□□□ 0.21
CLTCL1-201ENST00000412649 G3BP1Q13283 466 aaKnown RBP eCLIP16.36■□□□□ 0.21
CLTCL1-201ENST00000412649 ATP2B3Q16720 1220 aa16.36■□□□□ 0.21
CLTCL1-201ENST00000412649 DACT1Q9NYF0 836 aa16.36■□□□□ 0.21
CLTCL1-201ENST00000412649 NSFL1CQ9UNZ2 370 aaKnown RBP16.36■□□□□ 0.21
CLTCL1-201ENST00000412649 NLRP1Q9C000 1473 aa16.35■□□□□ 0.21
CLTCL1-201ENST00000412649 F6X3S4 739 aa16.35■□□□□ 0.21
CLTCL1-201ENST00000412649 SYT1P21579 422 aa16.35■□□□□ 0.21
CLTCL1-201ENST00000412649 TRIM34Q9BYJ4 488 aa16.35■□□□□ 0.21
CLTCL1-201ENST00000412649 SYCP2Q9BX26 1530 aa16.35■□□□□ 0.21
CLTCL1-201ENST00000412649 KDM5AP29375 1690 aaKnown RBP16.35■□□□□ 0.21
CLTCL1-201ENST00000412649 NOS1P29475 1434 aa16.35■□□□□ 0.21
CLTCL1-201ENST00000412649 EIF3JO75822 258 aaKnown RBP16.35■□□□□ 0.21
CLTCL1-201ENST00000412649 SYNE3Q6ZMZ3 975 aa16.35■□□□□ 0.21
CLTCL1-201ENST00000412649 ERO1AQ96HE7 468 aa16.35■□□□□ 0.21
CLTCL1-201ENST00000412649 DEF6Q9H4E7 631 aa16.35■□□□□ 0.21
CLTCL1-201ENST00000412649 NCOA3Q9Y6Q9 1424 aa16.35■□□□□ 0.21
CLTCL1-201ENST00000412649 CTAGE5O15320 804 aa16.34■□□□□ 0.21
CLTCL1-201ENST00000412649 SERPINC1P01008 464 aa16.34■□□□□ 0.21
CLTCL1-201ENST00000412649 PPIP5K1Q6PFW1 1433 aa16.34■□□□□ 0.21
CLTCL1-201ENST00000412649 OLFM4Q6UX06 510 aa16.34■□□□□ 0.21
CLTCL1-201ENST00000412649 C14orf93Q9H972 538 aaKnown RBP16.34■□□□□ 0.21
CLTCL1-201ENST00000412649 ZSCAN20P17040 1043 aaPredicted RBP16.34■□□□□ 0.21
CLTCL1-201ENST00000412649 DDX54Q8TDD1 881 aaKnown RBP16.34■□□□□ 0.21
CLTCL1-201ENST00000412649 KIF2CQ99661 725 aa16.34■□□□□ 0.21
CLTCL1-201ENST00000412649 STX1AQ16623 288 aa16.34■□□□□ 0.21
CLTCL1-201ENST00000412649 DNAJC25Q9H1X3 360 aa16.34■□□□□ 0.21
CLTCL1-201ENST00000412649 PYCARDQ9ULZ3 195 aa16.34■□□□□ 0.21
CLTCL1-201ENST00000412649 RAB11FIP3O75154 756 aa16.33■□□□□ 0.21
CLTCL1-201ENST00000412649 IRX3P78415 501 aaPredicted RBP16.33■□□□□ 0.21
CLTCL1-201ENST00000412649 ERCC4Q92889 916 aaPredicted RBP16.33■□□□□ 0.21
CLTCL1-201ENST00000412649 SPG7Q9UQ90 795 aa16.33■□□□□ 0.2
CLTCL1-201ENST00000412649 ADAMTS12P58397 1594 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms