RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 MAPK8IP3Q9UPT6 1336 aa10.9□□□□□ -0.66
RPE-204ENST00000411934 SYTL4Q96C24 671 aaPredicted RBP10.9□□□□□ -0.66
RPE-204ENST00000411934 PLEKHF1Q96S99 279 aa10.9□□□□□ -0.66
RPE-204ENST00000411934 SIPA1L3O60292 1781 aaPredicted RBP10.9□□□□□ -0.67
RPE-204ENST00000411934 PALLDQ8WX93 1383 aa10.9□□□□□ -0.67
RPE-204ENST00000411934 QSER1Q2KHR3 1735 aa10.89□□□□□ -0.67
RPE-204ENST00000411934 RNMTO43148 476 aaKnown RBP10.89□□□□□ -0.67
RPE-204ENST00000411934 EZH2Q15910 746 aaKnown RBP10.89□□□□□ -0.67
RPE-204ENST00000411934 TXNRD1Q16881 649 aa10.89□□□□□ -0.67
RPE-204ENST00000411934 SLC52A2Q9HAB3 445 aa10.89□□□□□ -0.67
RPE-204ENST00000411934 U3KPZ7 1027 aaPredicted RBP10.89□□□□□ -0.67
RPE-204ENST00000411934 CABP4P57796 275 aa10.88□□□□□ -0.67
RPE-204ENST00000411934 LMOD3Q0VAK6 560 aa10.88□□□□□ -0.67
RPE-204ENST00000411934 NBPF14Q5TI25 921 aa10.88□□□□□ -0.67
RPE-204ENST00000411934 MPRIPQ6WCQ1 1025 aa10.88□□□□□ -0.67
RPE-204ENST00000411934 PTF1AQ7RTS3 328 aa10.88□□□□□ -0.67
RPE-204ENST00000411934 PIGBQ92521 554 aa10.88□□□□□ -0.67
RPE-204ENST00000411934 PHACTR3Q96KR7 559 aa10.88□□□□□ -0.67
RPE-204ENST00000411934 C5P01031 1676 aa10.88□□□□□ -0.67
RPE-204ENST00000411934 DLG5Q8TDM6 1919 aa10.88□□□□□ -0.67
RPE-204ENST00000411934 UBR2Q8IWV8 1755 aa10.88□□□□□ -0.67
RPE-204ENST00000411934 TAF1LQ8IZX4 1826 aa10.87□□□□□ -0.67
RPE-204ENST00000411934 NFE2L2Q16236 605 aa10.87□□□□□ -0.67
RPE-204ENST00000411934 RTF1Q92541 710 aaKnown RBP10.87□□□□□ -0.67
RPE-204ENST00000411934 RUNDC1Q96C34 613 aa10.87□□□□□ -0.67
RPE-204ENST00000411934 NCBP3Q53F19 620 aaKnown RBP10.86□□□□□ -0.67
RPE-204ENST00000411934 PROM2Q8N271 834 aa10.86□□□□□ -0.67
RPE-204ENST00000411934 RBM42Q9BTD8 480 aaKnown RBP10.86□□□□□ -0.67
RPE-204ENST00000411934 TEFQ10587 303 aa10.85□□□□□ -0.67
RPE-204ENST00000411934 MRS2Q9HD23 443 aa10.85□□□□□ -0.67
RPE-204ENST00000411934 ADAMTS8Q9UP79 889 aa10.85□□□□□ -0.67
RPE-204ENST00000411934 KCPQ6ZWJ8 1503 aa10.84□□□□□ -0.67
RPE-204ENST00000411934 COL5A3P25940 1745 aaPredicted RBP10.84□□□□□ -0.67
RPE-204ENST00000411934 LOC102724428A0A0B4J2F2 783 aa10.84□□□□□ -0.67
RPE-204ENST00000411934 CCER2I3L3R5 266 aa10.84□□□□□ -0.67
RPE-204ENST00000411934 SIK1P57059 783 aa10.84□□□□□ -0.67
RPE-204ENST00000411934 NFATC2IPQ8NCF5 419 aa10.84□□□□□ -0.67
RPE-204ENST00000411934 ATG3Q9NT62 314 aa10.84□□□□□ -0.67
RPE-204ENST00000411934 CCNL1Q9UK58 526 aaPredicted RBP10.84□□□□□ -0.67
RPE-204ENST00000411934 C4BP0C0L5 1744 aa10.84□□□□□ -0.67
RPE-204ENST00000411934 TMPOP42166 694 aaKnown RBP10.83□□□□□ -0.68
RPE-204ENST00000411934 VSIG10Q8N0Z9 540 aa10.83□□□□□ -0.68
RPE-204ENST00000411934 IL17REQ8NFR9 667 aa10.83□□□□□ -0.68
RPE-204ENST00000411934 PNISRQ8TF01 805 aaKnown RBP10.83□□□□□ -0.68
RPE-204ENST00000411934 LGR6Q9HBX8 967 aa10.83□□□□□ -0.68
RPE-204ENST00000411934 LRRC4BQ9NT99 713 aa10.83□□□□□ -0.68
RPE-204ENST00000411934 BABAM1Q9NWV8 329 aa10.83□□□□□ -0.68
RPE-204ENST00000411934 STK32BQ9NY57 414 aa10.83□□□□□ -0.68
RPE-204ENST00000411934 ASAP1Q9ULH1 1129 aa10.83□□□□□ -0.68
RPE-204ENST00000411934 KDM3BQ7LBC6 1761 aa10.82□□□□□ -0.68
RPE-204ENST00000411934 CASZ1Q86V15 1759 aa10.82□□□□□ -0.68
RPE-204ENST00000411934 TJP1Q07157 1748 aa10.82□□□□□ -0.68
RPE-204ENST00000411934 SLC15A2Q16348 729 aa10.82□□□□□ -0.68
RPE-204ENST00000411934 TTC5Q8N0Z6 440 aa10.82□□□□□ -0.68
RPE-204ENST00000411934 NGEFQ8N5V2 710 aa10.82□□□□□ -0.68
RPE-204ENST00000411934 LRP5O75197 1615 aa10.82□□□□□ -0.68
RPE-204ENST00000411934 ZNF790Q6PG37 636 aa10.81□□□□□ -0.68
RPE-204ENST00000411934 FLAD1Q8NFF5 587 aa10.81□□□□□ -0.68
RPE-204ENST00000411934 AKT1S1Q96B36 256 aa10.81□□□□□ -0.68
RPE-204ENST00000411934 ANO8Q9HCE9 1232 aaPredicted RBP10.81□□□□□ -0.68
RPE-204ENST00000411934 CNTNAP4Q9C0A0 1308 aa10.81□□□□□ -0.68
RPE-204ENST00000411934 TUBGCP6Q96RT7 1819 aa10.8□□□□□ -0.68
RPE-204ENST00000411934 ABCB7O75027 752 aa10.8□□□□□ -0.68
RPE-204ENST00000411934 ATP6V1AP38606 617 aa10.8□□□□□ -0.68
RPE-204ENST00000411934 RIPK4P57078 832 aa10.8□□□□□ -0.68
RPE-204ENST00000411934 CALD1Q05682 793 aaKnown RBP10.8□□□□□ -0.68
RPE-204ENST00000411934 CCDC27Q2M243 656 aa10.8□□□□□ -0.68
RPE-204ENST00000411934 RC3H1Q5TC82 1133 aaKnown RBP10.8□□□□□ -0.68
RPE-204ENST00000411934 DIEXFQ68CQ4 756 aaKnown RBP10.8□□□□□ -0.68
RPE-204ENST00000411934 TEX13AQ9BXU3 409 aaPredicted RBP10.8□□□□□ -0.68
RPE-204ENST00000411934 UBR3Q6ZT12 1888 aa10.8□□□□□ -0.68
RPE-204ENST00000411934 HEG1Q9ULI3 1381 aa10.79□□□□□ -0.68
RPE-204ENST00000411934 BTBD11A6QL63 1104 aa10.79□□□□□ -0.68
RPE-204ENST00000411934 TAF7Q15545 349 aaPredicted RBP10.79□□□□□ -0.68
RPE-204ENST00000411934 CCDC184Q52MB2 194 aa10.79□□□□□ -0.68
RPE-204ENST00000411934 MCM10Q7L590 875 aa10.79□□□□□ -0.68
RPE-204ENST00000411934 SLC16A10Q8TF71 515 aa10.79□□□□□ -0.68
RPE-204ENST00000411934 LAMB4A4D0S4 1761 aa10.79□□□□□ -0.68
RPE-204ENST00000411934 COL24A1Q17RW2 1714 aa10.78□□□□□ -0.68
RPE-204ENST00000411934 SSFA2P28290 1259 aa10.78□□□□□ -0.68
RPE-204ENST00000411934 R3HDM1Q15032 1099 aaKnown RBP10.78□□□□□ -0.68
RPE-204ENST00000411934 ZNF827Q17R98 1081 aa10.78□□□□□ -0.68
RPE-204ENST00000411934 CCDC146Q8IYE0 955 aa10.78□□□□□ -0.68
RPE-204ENST00000411934 FMNL2Q96PY5 1086 aa10.78□□□□□ -0.68
RPE-204ENST00000411934 ITPK1Q13572 414 aa10.77□□□□□ -0.69
RPE-204ENST00000411934 LINC00116Q8NCU8 138 aa10.77□□□□□ -0.69
RPE-204ENST00000411934 AK7Q96M32 723 aa10.77□□□□□ -0.69
RPE-204ENST00000411934 SLC4A9Q96Q91 983 aa10.77□□□□□ -0.69
RPE-204ENST00000411934 APAF1O14727 1248 aa10.76□□□□□ -0.69
RPE-204ENST00000411934 PTCD1O75127 700 aaKnown RBP10.76□□□□□ -0.69
RPE-204ENST00000411934 SLC39A6Q13433 755 aa10.76□□□□□ -0.69
RPE-204ENST00000411934 DCTN1Q14203 1278 aa10.76□□□□□ -0.69
RPE-204ENST00000411934 TFCP2L1Q9NZI6 479 aa10.76□□□□□ -0.69
RPE-204ENST00000411934 TRIM35Q9UPQ4 493 aa10.76□□□□□ -0.69
RPE-204ENST00000411934 PNPLA7Q6ZV29 1317 aa10.76□□□□□ -0.69
RPE-204ENST00000411934 STARD3NLO95772 234 aa10.75□□□□□ -0.69
RPE-204ENST00000411934 ZNF496Q96IT1 587 aaPredicted RBP10.75□□□□□ -0.69
RPE-204ENST00000411934 IL16Q14005 1332 aa10.75□□□□□ -0.69
RPE-204ENST00000411934 MYH14Q7Z406 1995 aaKnown RBP10.74□□□□□ -0.69
RPE-204ENST00000411934 PSDA5PKW4 1024 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms